RNA–Protein interactions for RNA: ENST00000553277.5

LRP1-204, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 1,693 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-204ENST00000553277 XRN1Q8IZH2 1706 aaKnown RBP25.57■■□□□ 1.68
LRP1-204ENST00000553277 PTCH1Q13635 1447 aa25.56■■□□□ 1.68
LRP1-204ENST00000553277 CHD2O14647 1828 aaKnown RBP25.54■■□□□ 1.68
LRP1-204ENST00000553277 ROBO2Q9HCK4 1378 aa25.54■■□□□ 1.68
LRP1-204ENST00000553277 PRKRIP1Q9H875 184 aaPredicted RBP25.53■■□□□ 1.68
LRP1-204ENST00000553277 POGKQ9P215 609 aa25.53■■□□□ 1.68
LRP1-204ENST00000553277 AMOTL2Q9Y2J4 779 aa25.53■■□□□ 1.68
LRP1-204ENST00000553277 HSPA2P54652 639 aa25.52■■□□□ 1.68
LRP1-204ENST00000553277 PLEKHH1Q9ULM0 1364 aa25.51■■□□□ 1.67
LRP1-204ENST00000553277 WAPLQ7Z5K2 1190 aa25.51■■□□□ 1.67
LRP1-204ENST00000553277 TULP4Q9NRJ4 1543 aa25.51■■□□□ 1.67
LRP1-204ENST00000553277 EVC2Q86UK5 1308 aa25.5■■□□□ 1.67
LRP1-204ENST00000553277 STRCQ7RTU9 1775 aa25.5■■□□□ 1.67
LRP1-204ENST00000553277 NWD1Q149M9 1564 aa25.46■■□□□ 1.67
LRP1-204ENST00000553277 KCNA6P17658 529 aa25.45■■□□□ 1.66
LRP1-204ENST00000553277 SAFB2Q14151 953 aaKnown RBP eCLIP25.45■■□□□ 1.66
LRP1-204ENST00000553277 ADGRB2O60241 1585 aa25.44■■□□□ 1.66
LRP1-204ENST00000553277 MINK1Q8N4C8 1332 aaPredicted RBP25.43■■□□□ 1.66
LRP1-204ENST00000553277 MYOM1P52179 1685 aa25.42■■□□□ 1.66
LRP1-204ENST00000553277 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.42■■□□□ 1.66
LRP1-204ENST00000553277 NEFLP07196 543 aa25.42■■□□□ 1.66
LRP1-204ENST00000553277 POLR3GLQ9BT43 218 aa25.41■■□□□ 1.66
LRP1-204ENST00000553277 WASLO00401 505 aaPredicted RBP25.38■■□□□ 1.65
LRP1-204ENST00000553277 PER1O15534 1290 aaPredicted RBP25.38■■□□□ 1.65
LRP1-204ENST00000553277 HNRNPUQ00839 825 aaKnown RBP eCLIP25.38■■□□□ 1.65
LRP1-204ENST00000553277 CDK19Q9BWU1 502 aa25.38■■□□□ 1.65
LRP1-204ENST00000553277 ATAD2Q6PL18 1390 aa25.37■■□□□ 1.65
LRP1-204ENST00000553277 NINLQ9Y2I6 1382 aa25.37■■□□□ 1.65
LRP1-204ENST00000553277 NKTRP30414 1462 aaKnown RBP25.37■■□□□ 1.65
LRP1-204ENST00000553277 FKBP8Q14318 412 aa25.35■■□□□ 1.65
LRP1-204ENST00000553277 CABP2Q9NPB3 220 aa25.34■■□□□ 1.65
LRP1-204ENST00000553277 PANK3Q9H999 370 aa25.33■■□□□ 1.65
LRP1-204ENST00000553277 KTN1Q86UP2 1357 aaKnown RBP25.33■■□□□ 1.64
LRP1-204ENST00000553277 SRPK2P78362 688 aaKnown RBP25.32■■□□□ 1.64
LRP1-204ENST00000553277 MRS2Q9HD23 443 aa25.31■■□□□ 1.64
LRP1-204ENST00000553277 DMRT2Q9Y5R5 561 aa25.3■■□□□ 1.64
LRP1-204ENST00000553277 SLC12A5Q9H2X9 1139 aa25.29■■□□□ 1.64
LRP1-204ENST00000553277 STRCP1A6NGW2 1772 aa25.29■■□□□ 1.64
LRP1-204ENST00000553277 NCOA3Q9Y6Q9 1424 aa25.29■■□□□ 1.64
LRP1-204ENST00000553277 ZBED9Q6R2W3 1325 aa25.28■■□□□ 1.64
LRP1-204ENST00000553277 CCDC184Q52MB2 194 aa25.28■■□□□ 1.64
LRP1-204ENST00000553277 ADGRL3Q9HAR2 1447 aa25.27■■□□□ 1.64
LRP1-204ENST00000553277 ERICH6BQ5W0A0 696 aa25.26■■□□□ 1.63
LRP1-204ENST00000553277 ATP7BP35670 1465 aa25.26■■□□□ 1.63
LRP1-204ENST00000553277 CDC42BPGQ6DT37 1551 aa25.26■■□□□ 1.63
LRP1-204ENST00000553277 ANKRD36BQ8N2N9 1353 aa25.25■■□□□ 1.63
LRP1-204ENST00000553277 NALCNQ8IZF0 1738 aa25.25■■□□□ 1.63
LRP1-204ENST00000553277 CCDC61Q9Y6R9 512 aa25.25■■□□□ 1.63
LRP1-204ENST00000553277 NPC1L1Q9UHC9 1359 aa25.25■■□□□ 1.63
LRP1-204ENST00000553277 NUDT16Q96DE0 195 aaKnown RBP25.24■■□□□ 1.63
LRP1-204ENST00000553277 CARD14Q9BXL6 1004 aa25.23■■□□□ 1.63
LRP1-204ENST00000553277 PRR36Q9H6K5 1346 aa25.23■■□□□ 1.63
LRP1-204ENST00000553277 CD163L1Q9NR16 1453 aa25.23■■□□□ 1.63
LRP1-204ENST00000553277 TMC1Q8TDI8 760 aa25.23■■□□□ 1.63
LRP1-204ENST00000553277 ANKARQ7Z5J8 1434 aa25.22■■□□□ 1.63
LRP1-204ENST00000553277 PROSER2Q86WR7 435 aaPredicted RBP25.22■■□□□ 1.63
LRP1-204ENST00000553277 TOPAZ1Q8N9V7 1692 aa25.21■■□□□ 1.63
LRP1-204ENST00000553277 FMN2Q9NZ56 1722 aa25.21■■□□□ 1.63
LRP1-204ENST00000553277 USP32Q8NFA0 1604 aa25.2■■□□□ 1.63
LRP1-204ENST00000553277 AMER1Q5JTC6 1135 aaPredicted RBP25.2■■□□□ 1.63
LRP1-204ENST00000553277 CABP1Q9NZU7 370 aa25.2■■□□□ 1.63
LRP1-204ENST00000553277 KNSTRNQ9Y448 316 aa25.2■■□□□ 1.62
LRP1-204ENST00000553277 TERF2IPQ9NYB0 399 aa25.19■■□□□ 1.62
LRP1-204ENST00000553277 CPSF1Q10570 1443 aaKnown RBP25.19■■□□□ 1.62
LRP1-204ENST00000553277 PLEKHG3A1L390 1219 aa25.18■■□□□ 1.62
LRP1-204ENST00000553277 PPIP5K1Q6PFW1 1433 aa25.18■■□□□ 1.62
LRP1-204ENST00000553277 A0A1W2PP64 1363 aa25.17■■□□□ 1.62
LRP1-204ENST00000553277 RALBP1Q15311 655 aa25.17■■□□□ 1.62
LRP1-204ENST00000553277 TMEM94Q12767 1356 aa25.16■■□□□ 1.62
LRP1-204ENST00000553277 FAM9BQ8IZU0 186 aa25.16■■□□□ 1.62
LRP1-204ENST00000553277 C19orf44Q9H6X5 657 aa25.16■■□□□ 1.62
LRP1-204ENST00000553277 PARD3Q8TEW0 1356 aa25.16■■□□□ 1.62
LRP1-204ENST00000553277 DCCP43146 1447 aa25.15■■□□□ 1.62
LRP1-204ENST00000553277 ITSN1Q15811 1721 aa25.14■■□□□ 1.62
LRP1-204ENST00000553277 ZNF335Q9H4Z2 1342 aaPredicted RBP25.14■■□□□ 1.61
LRP1-204ENST00000553277 RBM33Q96EV2 1170 aaKnown RBP25.13■■□□□ 1.61
LRP1-204ENST00000553277 NSD3Q9BZ95 1437 aa25.13■■□□□ 1.61
LRP1-204ENST00000553277 LRRC7Q96NW7 1537 aa25.13■■□□□ 1.61
LRP1-204ENST00000553277 BRD4O60885 1362 aaPredicted RBP25.12■■□□□ 1.61
LRP1-204ENST00000553277 HDGFL2Q7Z4V5 671 aaPredicted RBP25.12■■□□□ 1.61
LRP1-204ENST00000553277 TSHZ2Q9NRE2 1034 aa25.12■■□□□ 1.61
LRP1-204ENST00000553277 ZNF692Q9BU19 519 aaPredicted RBP25.11■■□□□ 1.61
LRP1-204ENST00000553277 XIRP1Q702N8 1843 aaKnown RBP25.11■■□□□ 1.61
LRP1-204ENST00000553277 RGPD8O14715 1765 aaPredicted RBP25.1■■□□□ 1.61
LRP1-204ENST00000553277 AKAP12Q02952 1782 aa25.1■■□□□ 1.61
LRP1-204ENST00000553277 POLR3AO14802 1390 aaPredicted RBP25.1■■□□□ 1.61
LRP1-204ENST00000553277 MON2Q7Z3U7 1717 aa25.08■■□□□ 1.61
LRP1-204ENST00000553277 CGNL1Q0VF96 1302 aa25.08■■□□□ 1.61
LRP1-204ENST00000553277 MYBBP1AQ9BQG0 1328 aaKnown RBP25.08■■□□□ 1.61
LRP1-204ENST00000553277 NSD2O96028 1365 aa25.08■■□□□ 1.61
LRP1-204ENST00000553277 PNISRQ8TF01 805 aaKnown RBP25.07■■□□□ 1.6
LRP1-204ENST00000553277 EDC4Q6P2E9 1401 aaKnown RBP25.07■■□□□ 1.6
LRP1-204ENST00000553277 C14orf37Q86TY3 774 aa25.07■■□□□ 1.6
LRP1-204ENST00000553277 SMG6Q86US8 1419 aaKnown RBP25.06■■□□□ 1.6
LRP1-204ENST00000553277 NUTM2FA1L443 756 aa25.05■■□□□ 1.6
LRP1-204ENST00000553277 ACEP12821 1306 aa25.05■■□□□ 1.6
LRP1-204ENST00000553277 CC2D1BQ5T0F9 858 aaKnown RBP25.04■■□□□ 1.6
LRP1-204ENST00000553277 SSH2Q76I76 1423 aa25.04■■□□□ 1.6
LRP1-204ENST00000553277 MSH6P52701 1360 aa25.02■■□□□ 1.6
LRP1-204ENST00000553277 CADPS2Q86UW7 1296 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms