RNA–Protein interactions for RNA: ENST00000553071.1

ITGA5-213, Transcript of integrin subunit alpha 5, humanhuman

TSL 1 (best)

Gene ITGA5, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-213ENST00000553071 CADPS2Q86UW7 1296 aa24.19■■□□□ 1.46
ITGA5-213ENST00000553071 SAFB2Q14151 953 aaKnown RBP eCLIP24.18■■□□□ 1.46
ITGA5-213ENST00000553071 RBM33Q96EV2 1170 aaKnown RBP24.18■■□□□ 1.46
ITGA5-213ENST00000553071 ADGRL3Q9HAR2 1447 aa24.17■■□□□ 1.46
ITGA5-213ENST00000553071 PLEKHH1Q9ULM0 1364 aa24.16■■□□□ 1.46
ITGA5-213ENST00000553071 ST20-MTHFSA0A0A6YYL1 179 aa24.16■■□□□ 1.46
ITGA5-213ENST00000553071 DCCP43146 1447 aa24.16■■□□□ 1.46
ITGA5-213ENST00000553071 TOM1O60784 492 aa24.15■■□□□ 1.46
ITGA5-213ENST00000553071 SBNO2Q9Y2G9 1366 aa24.15■■□□□ 1.46
ITGA5-213ENST00000553071 MINK1Q8N4C8 1332 aaPredicted RBP24.13■■□□□ 1.45
ITGA5-213ENST00000553071 ARHGEF28Q8N1W1 1705 aaKnown RBP24.12■■□□□ 1.45
ITGA5-213ENST00000553071 EVC2Q86UK5 1308 aa24.11■■□□□ 1.45
ITGA5-213ENST00000553071 WASLO00401 505 aaPredicted RBP24.11■■□□□ 1.45
ITGA5-213ENST00000553071 HSPA5P11021 654 aaKnown RBP24.09■■□□□ 1.45
ITGA5-213ENST00000553071 CDCA8Q53HL2 280 aa24.09■■□□□ 1.45
ITGA5-213ENST00000553071 TMF1P82094 1093 aa24.08■■□□□ 1.45
ITGA5-213ENST00000553071 HIRIP3Q9BW71 556 aaPredicted RBP24.08■■□□□ 1.45
ITGA5-213ENST00000553071 PUS7Q96PZ0 661 aaKnown RBP24.07■■□□□ 1.44
ITGA5-213ENST00000553071 SLAIN2Q9P270 581 aa24.07■■□□□ 1.44
ITGA5-213ENST00000553071 TESK2Q96S53 571 aa24.06■■□□□ 1.44
ITGA5-213ENST00000553071 CDK19Q9BWU1 502 aa24.06■■□□□ 1.44
ITGA5-213ENST00000553071 UBAP1LF5GYI3 381 aa24.05■■□□□ 1.44
ITGA5-213ENST00000553071 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.04■■□□□ 1.44
ITGA5-213ENST00000553071 CDC42BPGQ6DT37 1551 aa24.04■■□□□ 1.44
ITGA5-213ENST00000553071 SRPK2P78362 688 aaKnown RBP24.04■■□□□ 1.44
ITGA5-213ENST00000553071 ADGRB2O60241 1585 aa24.03■■□□□ 1.44
ITGA5-213ENST00000553071 XIRP1Q702N8 1843 aaKnown RBP24.03■■□□□ 1.44
ITGA5-213ENST00000553071 QRICH2Q9H0J4 1663 aa24.01■■□□□ 1.43
ITGA5-213ENST00000553071 ANKARQ7Z5J8 1434 aa24.01■■□□□ 1.43
ITGA5-213ENST00000553071 NALCNQ8IZF0 1738 aa24■■□□□ 1.43
ITGA5-213ENST00000553071 CCDC61Q9Y6R9 512 aa23.99■■□□□ 1.43
ITGA5-213ENST00000553071 NUDT16Q96DE0 195 aaKnown RBP23.98■■□□□ 1.43
ITGA5-213ENST00000553071 MST1RQ04912 1400 aa23.97■■□□□ 1.43
ITGA5-213ENST00000553071 ATAD2Q6PL18 1390 aa23.97■■□□□ 1.43
ITGA5-213ENST00000553071 C1orf167Q5SNV9 1468 aa23.96■■□□□ 1.43
ITGA5-213ENST00000553071 ESCO1Q5FWF5 840 aa23.96■■□□□ 1.43
ITGA5-213ENST00000553071 CABP2Q9NPB3 220 aa23.96■■□□□ 1.43
ITGA5-213ENST00000553071 NUTM2FA1L443 756 aa23.95■■□□□ 1.42
ITGA5-213ENST00000553071 TULP4Q9NRJ4 1543 aa23.94■■□□□ 1.42
ITGA5-213ENST00000553071 PIP4K2BP78356 416 aa23.91■■□□□ 1.42
ITGA5-213ENST00000553071 PHF8Q9UPP1 1060 aa23.91■■□□□ 1.42
ITGA5-213ENST00000553071 FMN2Q9NZ56 1722 aa23.9■■□□□ 1.42
ITGA5-213ENST00000553071 SCAF1Q9H7N4 1312 aaKnown RBP23.9■■□□□ 1.42
ITGA5-213ENST00000553071 PLEKHG3A1L390 1219 aa23.9■■□□□ 1.42
ITGA5-213ENST00000553071 BRINP3Q76B58 766 aa23.9■■□□□ 1.42
ITGA5-213ENST00000553071 NINLQ9Y2I6 1382 aa23.9■■□□□ 1.42
ITGA5-213ENST00000553071 PRR36Q9H6K5 1346 aa23.89■■□□□ 1.42
ITGA5-213ENST00000553071 FBXO41Q8TF61 875 aa23.89■■□□□ 1.41
ITGA5-213ENST00000553071 ORAI2Q96SN7 254 aa23.89■■□□□ 1.41
ITGA5-213ENST00000553071 DISP3Q9P2K9 1392 aa23.89■■□□□ 1.41
ITGA5-213ENST00000553071 NGDNQ8NEJ9 315 aaKnown RBP23.87■■□□□ 1.41
ITGA5-213ENST00000553071 CABP1Q9NZU7 370 aa23.87■■□□□ 1.41
ITGA5-213ENST00000553071 ATP7BP35670 1465 aa23.87■■□□□ 1.41
ITGA5-213ENST00000553071 TMC1Q8TDI8 760 aa23.86■■□□□ 1.41
ITGA5-213ENST00000553071 ZNF692Q9BU19 519 aaPredicted RBP23.86■■□□□ 1.41
ITGA5-213ENST00000553071 NPHP3Q7Z494 1330 aa23.85■■□□□ 1.41
ITGA5-213ENST00000553071 TERF2IPQ9NYB0 399 aa23.84■■□□□ 1.41
ITGA5-213ENST00000553071 PPIP5K1Q6PFW1 1433 aa23.84■■□□□ 1.41
ITGA5-213ENST00000553071 PSME1Q06323 249 aa23.83■■□□□ 1.41
ITGA5-213ENST00000553071 PMFBP1Q8TBY8 1022 aa23.83■■□□□ 1.41
ITGA5-213ENST00000553071 FOXO3O43524 673 aa23.82■■□□□ 1.4
ITGA5-213ENST00000553071 HDGFL2Q7Z4V5 671 aaPredicted RBP23.82■■□□□ 1.4
ITGA5-213ENST00000553071 POLR3GLQ9BT43 218 aa23.82■■□□□ 1.4
ITGA5-213ENST00000553071 SLC12A5Q9H2X9 1139 aa23.8■■□□□ 1.4
ITGA5-213ENST00000553071 ACEP12821 1306 aa23.8■■□□□ 1.4
ITGA5-213ENST00000553071 POLR3AO14802 1390 aaPredicted RBP23.79■■□□□ 1.4
ITGA5-213ENST00000553071 BRD4O60885 1362 aaPredicted RBP23.79■■□□□ 1.4
ITGA5-213ENST00000553071 ITSN1Q15811 1721 aa23.79■■□□□ 1.4
ITGA5-213ENST00000553071 C11orf95C9JLR9 678 aaPredicted RBP23.79■■□□□ 1.4
ITGA5-213ENST00000553071 KIF1AQ12756 1690 aa23.79■■□□□ 1.4
ITGA5-213ENST00000553071 KIF7Q2M1P5 1343 aa23.79■■□□□ 1.4
ITGA5-213ENST00000553071 USP32Q8NFA0 1604 aa23.78■■□□□ 1.4
ITGA5-213ENST00000553071 KRT28Q7Z3Y7 464 aa23.77■■□□□ 1.4
ITGA5-213ENST00000553071 CCDC7Q96M83 1385 aa23.77■■□□□ 1.4
ITGA5-213ENST00000553071 ROBO1Q9Y6N7 1651 aa23.76■■□□□ 1.39
ITGA5-213ENST00000553071 LRRC59Q96AG4 307 aaKnown RBP23.75■■□□□ 1.39
ITGA5-213ENST00000553071 SOS2Q07890 1332 aaPredicted RBP23.75■■□□□ 1.39
ITGA5-213ENST00000553071 WASHC2AQ641Q2 1341 aa23.74■■□□□ 1.39
ITGA5-213ENST00000553071 ZNF316A6NFI3 1004 aaPredicted RBP23.73■■□□□ 1.39
ITGA5-213ENST00000553071 ANKRD36BQ8N2N9 1353 aa23.73■■□□□ 1.39
ITGA5-213ENST00000553071 RGPD8O14715 1765 aaPredicted RBP23.73■■□□□ 1.39
ITGA5-213ENST00000553071 CPSF1Q10570 1443 aaKnown RBP23.72■■□□□ 1.39
ITGA5-213ENST00000553071 TOPAZ1Q8N9V7 1692 aa23.72■■□□□ 1.39
ITGA5-213ENST00000553071 SBNO1A3KN83 1393 aa23.71■■□□□ 1.39
ITGA5-213ENST00000553071 KTN1Q86UP2 1357 aaKnown RBP23.71■■□□□ 1.39
ITGA5-213ENST00000553071 AHDC1Q5TGY3 1603 aaPredicted RBP23.7■■□□□ 1.39
ITGA5-213ENST00000553071 DDX17Q92841 729 aaKnown RBP23.69■■□□□ 1.38
ITGA5-213ENST00000553071 PAK3O75914 559 aaPredicted RBP23.68■■□□□ 1.38
ITGA5-213ENST00000553071 USP6P35125 1406 aa23.67■■□□□ 1.38
ITGA5-213ENST00000553071 TTC21AQ8NDW8 1320 aa23.67■■□□□ 1.38
ITGA5-213ENST00000553071 HSPA1LP34931 641 aa23.67■■□□□ 1.38
ITGA5-213ENST00000553071 XPCQ01831 940 aaPredicted RBP23.67■■□□□ 1.38
ITGA5-213ENST00000553071 PANK3Q9H999 370 aa23.67■■□□□ 1.38
ITGA5-213ENST00000553071 A0A1W2PP64 1363 aa23.66■■□□□ 1.38
ITGA5-213ENST00000553071 NHSL1Q5SYE7 1610 aa23.66■■□□□ 1.38
ITGA5-213ENST00000553071 SPATA31A3Q5VYP0 1347 aa23.65■■□□□ 1.38
ITGA5-213ENST00000553071 PXDNQ92626 1479 aa23.65■■□□□ 1.38
ITGA5-213ENST00000553071 EDC4Q6P2E9 1401 aaKnown RBP23.65■■□□□ 1.38
ITGA5-213ENST00000553071 ARHGEF10O15013 1369 aa23.65■■□□□ 1.38
ITGA5-213ENST00000553071 TTC21BQ7Z4L5 1316 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms