RNA–Protein interactions for RNA: ENST00000553055.1

PFKM-231, Transcript of phosphofructokinase, muscle, human

TSL 5

Gene PFKM, Length 289 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-231	ENST00000553055	PNMA1	Q8ND90	353 aa		10.59	□□□□□ -0.71
PFKM-231	ENST00000553055	GPR37L1	O60883	481 aa		10.58	□□□□□ -0.72
PFKM-231	ENST00000553055	PHLDB3	Q6NSJ2	640 aa		10.58	□□□□□ -0.72
PFKM-231	ENST00000553055	TBC1D9	Q6ZT07	1266 aa		10.58	□□□□□ -0.72
PFKM-231	ENST00000553055	BIN2	Q9UBW5	565 aa	Predicted RBP	10.58	□□□□□ -0.72
PFKM-231	ENST00000553055	ZMIZ1	Q9ULJ6	1067 aa		10.58	□□□□□ -0.72
PFKM-231	ENST00000553055	NOVA2	Q9UNW9	492 aa	Known RBP	10.58	□□□□□ -0.72
PFKM-231	ENST00000553055	ANKRD62	A6NC57	917 aa		10.57	□□□□□ -0.72
PFKM-231	ENST00000553055	ANKRD33B	A6NCL7	494 aa		10.57	□□□□□ -0.72
PFKM-231	ENST00000553055	TTLL13P	A6NNM8	815 aa		10.57	□□□□□ -0.72
PFKM-231	ENST00000553055	HELB	Q8NG08	1087 aa	Predicted RBP	10.57	□□□□□ -0.72
PFKM-231	ENST00000553055	TRIM34	Q9BYJ4	488 aa		10.57	□□□□□ -0.72
PFKM-231	ENST00000553055	TRPC6	Q9Y210	931 aa		10.57	□□□□□ -0.72
PFKM-231	ENST00000553055	PCDHB15	Q9Y5E8	787 aa		10.57	□□□□□ -0.72
PFKM-231	ENST00000553055	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	10.56	□□□□□ -0.72
PFKM-231	ENST00000553055	RIMBP3C	A6NJZ7	1639 aa		10.56	□□□□□ -0.72
PFKM-231	ENST00000553055	RIMBP3B	A6NNM3	1639 aa		10.56	□□□□□ -0.72
PFKM-231	ENST00000553055	RIMBP3	Q9UFD9	1639 aa		10.56	□□□□□ -0.72
PFKM-231	ENST00000553055	NDUFV2	P19404	249 aa		10.56	□□□□□ -0.72
PFKM-231	ENST00000553055	SSFA2	P28290	1259 aa		10.56	□□□□□ -0.72
PFKM-231	ENST00000553055	NPAS4	Q8IUM7	802 aa		10.56	□□□□□ -0.72
PFKM-231	ENST00000553055	CABLES1	Q8TDN4	633 aa		10.56	□□□□□ -0.72
PFKM-231	ENST00000553055	STK32A	Q8WU08	396 aa		10.56	□□□□□ -0.72
PFKM-231	ENST00000553055	HMX1	Q9NP08	348 aa	Predicted RBP	10.56	□□□□□ -0.72
PFKM-231	ENST00000553055	BRD2	P25440	801 aa	Known RBP	10.55	□□□□□ -0.72
PFKM-231	ENST00000553055	EIF4G2	P78344	907 aa	Known RBP eCLIP	10.55	□□□□□ -0.72
PFKM-231	ENST00000553055	NOM1	Q5C9Z4	860 aa	Known RBP	10.55	□□□□□ -0.72
PFKM-231	ENST00000553055	PTCD2	Q8WV60	388 aa	Known RBP	10.55	□□□□□ -0.72
PFKM-231	ENST00000553055	SMARCA2	P51531	1590 aa		10.55	□□□□□ -0.72
PFKM-231	ENST00000553055	DCAF1	Q9Y4B6	1507 aa		10.54	□□□□□ -0.72
PFKM-231	ENST00000553055	KANK4	Q5T7N3	995 aa	Predicted RBP	10.54	□□□□□ -0.72
PFKM-231	ENST00000553055	MS4A3	Q96HJ5	214 aa		10.54	□□□□□ -0.72
PFKM-231	ENST00000553055	ARID4B	Q4LE39	1312 aa	Predicted RBP	10.54	□□□□□ -0.72
PFKM-231	ENST00000553055	PDCD7	Q8N8D1	485 aa	Known RBP	10.53	□□□□□ -0.72
PFKM-231	ENST00000553055	PCDHGA10	Q9Y5H3	936 aa		10.53	□□□□□ -0.72
PFKM-231	ENST00000553055	HIRIP3	Q9BW71	556 aa	Predicted RBP	10.52	□□□□□ -0.73
PFKM-231	ENST00000553055	TRIM35	Q9UPQ4	493 aa		10.52	□□□□□ -0.73
PFKM-231	ENST00000553055	DHX37	Q8IY37	1157 aa	Known RBP	10.51	□□□□□ -0.73
PFKM-231	ENST00000553055	TTC13	Q8NBP0	860 aa		10.51	□□□□□ -0.73
PFKM-231	ENST00000553055	SERPINB4	P48594	390 aa		10.5	□□□□□ -0.73
PFKM-231	ENST00000553055	CTDSPL2	Q05D32	466 aa		10.5	□□□□□ -0.73
PFKM-231	ENST00000553055	FAM196B	A6NMK8	535 aa		10.49	□□□□□ -0.73
PFKM-231	ENST00000553055	DDX11L8	A8MPP1	907 aa		10.49	□□□□□ -0.73
PFKM-231	ENST00000553055	RECK	O95980	971 aa		10.49	□□□□□ -0.73
PFKM-231	ENST00000553055	CD44	P16070	742 aa	Known RBP	10.49	□□□□□ -0.73
PFKM-231	ENST00000553055	ARHGEF11	O15085	1522 aa		10.48	□□□□□ -0.73
PFKM-231	ENST00000553055	ERCC5	P28715	1186 aa	Predicted RBP	10.48	□□□□□ -0.73
PFKM-231	ENST00000553055	CYB5RL	Q6IPT4	315 aa		10.48	□□□□□ -0.73
PFKM-231	ENST00000553055	NFATC2IP	Q8NCF5	419 aa		10.48	□□□□□ -0.73
PFKM-231	ENST00000553055	CLP1	Q92989	425 aa	Known RBP	10.48	□□□□□ -0.73
PFKM-231	ENST00000553055	RCCD1	A6NED2	376 aa		10.47	□□□□□ -0.73
PFKM-231	ENST00000553055	USP46	P62068	366 aa		10.47	□□□□□ -0.73
PFKM-231	ENST00000553055	USP17L3	A6NCW0	530 aa		10.46	□□□□□ -0.73
PFKM-231	ENST00000553055	USP17L4	A6NCW7	530 aa		10.46	□□□□□ -0.73
PFKM-231	ENST00000553055	USP17L2	Q6R6M4	530 aa		10.46	□□□□□ -0.73
PFKM-231	ENST00000553055	USP17L1	Q7RTZ2	530 aa		10.46	□□□□□ -0.73
PFKM-231	ENST00000553055	TSC1	Q92574	1164 aa		10.46	□□□□□ -0.73
PFKM-231	ENST00000553055	ZC3H4	Q9UPT8	1303 aa	Known RBP	10.46	□□□□□ -0.73
PFKM-231	ENST00000553055	ZCCHC6	Q5VYS8	1495 aa	Known RBP	10.45	□□□□□ -0.74
PFKM-231	ENST00000553055	USP17L15	C9J2P7	530 aa		10.45	□□□□□ -0.74
PFKM-231	ENST00000553055	USP17L10	C9JJH3	530 aa		10.45	□□□□□ -0.74
PFKM-231	ENST00000553055	USP17L13	C9JLJ4	530 aa		10.45	□□□□□ -0.74
PFKM-231	ENST00000553055	USP17L12	C9JPN9	530 aa		10.45	□□□□□ -0.74
PFKM-231	ENST00000553055	USP17L11	C9JVI0	530 aa		10.45	□□□□□ -0.74
PFKM-231	ENST00000553055	USP17L21	D6R901	530 aa		10.45	□□□□□ -0.74
PFKM-231	ENST00000553055	USP17L18	D6R9N7	530 aa		10.45	□□□□□ -0.74
PFKM-231	ENST00000553055	USP17L22	D6RA61	530 aa		10.45	□□□□□ -0.74
PFKM-231	ENST00000553055	USP17L17	D6RBQ6	530 aa		10.45	□□□□□ -0.74
PFKM-231	ENST00000553055	USP17L19	D6RCP7	530 aa		10.45	□□□□□ -0.74
PFKM-231	ENST00000553055	USP17L20	D6RJB6	530 aa		10.45	□□□□□ -0.74
PFKM-231	ENST00000553055	FDX1	P10109	184 aa		10.45	□□□□□ -0.74
PFKM-231	ENST00000553055	ATP2B4	P23634	1241 aa		10.45	□□□□□ -0.74
PFKM-231	ENST00000553055	USP17L24	Q0WX57	530 aa		10.45	□□□□□ -0.74
PFKM-231	ENST00000553055	TSNAXIP1	Q2TAA8	658 aa		10.45	□□□□□ -0.74
PFKM-231	ENST00000553055	FAM200A	Q8TCP9	573 aa		10.45	□□□□□ -0.74
PFKM-231	ENST00000553055	KDM4A	O75164	1064 aa		10.44	□□□□□ -0.74
PFKM-231	ENST00000553055	FXR2	P51116	673 aa	Known RBP eCLIP	10.44	□□□□□ -0.74
PFKM-231	ENST00000553055	LARP1	Q6PKG0	1096 aa	Known RBP	10.44	□□□□□ -0.74
PFKM-231	ENST00000553055	FBXO33	Q7Z6M2	555 aa		10.44	□□□□□ -0.74
PFKM-231	ENST00000553055	NOP9	Q86U38	636 aa	Known RBP	10.44	□□□□□ -0.74
PFKM-231	ENST00000553055	PLEKHM2	Q8IWE5	1019 aa		10.44	□□□□□ -0.74
PFKM-231	ENST00000553055	LRRN4	Q8WUT4	740 aa		10.44	□□□□□ -0.74
PFKM-231	ENST00000553055	JPH4	Q96JJ6	628 aa		10.44	□□□□□ -0.74
PFKM-231	ENST00000553055	ATAD2B	Q9ULI0	1458 aa		10.43	□□□□□ -0.74
PFKM-231	ENST00000553055	PDS5B	Q9NTI5	1447 aa		10.43	□□□□□ -0.74
PFKM-231	ENST00000553055	PRSS12	P56730	875 aa		10.43	□□□□□ -0.74
PFKM-231	ENST00000553055	C6orf132	Q5T0Z8	1188 aa		10.43	□□□□□ -0.74
PFKM-231	ENST00000553055	DPH6	Q7L8W6	267 aa		10.43	□□□□□ -0.74
PFKM-231	ENST00000553055	OCEL1	Q9H607	264 aa		10.43	□□□□□ -0.74
PFKM-231	ENST00000553055	BMP2K	Q9NSY1	1161 aa	Predicted RBP	10.43	□□□□□ -0.74
PFKM-231	ENST00000553055	LZTS3	O60299	673 aa	Predicted RBP	10.42	□□□□□ -0.74
PFKM-231	ENST00000553055	MTMR2	Q13614	643 aa		10.42	□□□□□ -0.74
PFKM-231	ENST00000553055	GIMAP6	Q6P9H5	292 aa		10.42	□□□□□ -0.74
PFKM-231	ENST00000553055	EGFL7	Q9UHF1	273 aa		10.42	□□□□□ -0.74
PFKM-231	ENST00000553055	TMA7	Q9Y2S6	64 aa	Known RBP	10.42	□□□□□ -0.74
PFKM-231	ENST00000553055	LAMC3	Q9Y6N6	1575 aa		10.42	□□□□□ -0.74
PFKM-231	ENST00000553055	KIF21A	Q7Z4S6	1674 aa		10.41	□□□□□ -0.74
PFKM-231	ENST00000553055	USP17L5	A8MUK1	530 aa		10.41	□□□□□ -0.74
PFKM-231	ENST00000553055	SLC34A2	O95436	690 aa		10.41	□□□□□ -0.74
PFKM-231	ENST00000553055	COL19A1	Q14993	1142 aa		10.41	□□□□□ -0.74

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