RNA–Protein interactions for RNA: ENST00000552866.5

RFX4-211, Transcript of regulatory factor X4, humanhuman

TSL 4

Gene RFX4, Length 599 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-211ENST00000552866 PRR7Q8TB68 274 aa9.66□□□□□ -0.86
RFX4-211ENST00000552866 DCBLD2Q96PD2 775 aa9.66□□□□□ -0.86
RFX4-211ENST00000552866 BCL2L12Q9HB09 334 aa9.66□□□□□ -0.86
RFX4-211ENST00000552866 METRNQ9UJH8 293 aa9.66□□□□□ -0.86
RFX4-211ENST00000552866 TRIM6-TRIM34B2RNG4 842 aa9.65□□□□□ -0.86
RFX4-211ENST00000552866 RSPH4AQ5TD94 716 aa9.65□□□□□ -0.86
RFX4-211ENST00000552866 LRRN4Q8WUT4 740 aa9.65□□□□□ -0.86
RFX4-211ENST00000552866 PPP4R3BQ5MIZ7 849 aa9.64□□□□□ -0.87
RFX4-211ENST00000552866 PACS2Q86VP3 889 aa9.64□□□□□ -0.87
RFX4-211ENST00000552866 SEMA3FQ13275 785 aa9.63□□□□□ -0.87
RFX4-211ENST00000552866 GUCA2AQ02747 115 aa9.62□□□□□ -0.87
RFX4-211ENST00000552866 DOK7Q18PE1 504 aa9.62□□□□□ -0.87
RFX4-211ENST00000552866 TSC1Q92574 1164 aa9.62□□□□□ -0.87
RFX4-211ENST00000552866 KHSRPQ92945 711 aaKnown RBP eCLIP9.62□□□□□ -0.87
RFX4-211ENST00000552866 PSDA5PKW4 1024 aaPredicted RBP9.61□□□□□ -0.87
RFX4-211ENST00000552866 CFAP99D6REC4 459 aa9.61□□□□□ -0.87
RFX4-211ENST00000552866 PTPREP23469 700 aa9.61□□□□□ -0.87
RFX4-211ENST00000552866 CDCA8Q53HL2 280 aa9.61□□□□□ -0.87
RFX4-211ENST00000552866 ARSIQ5FYB1 569 aa9.61□□□□□ -0.87
RFX4-211ENST00000552866 ZSWIM6Q9HCJ5 1215 aa9.61□□□□□ -0.87
RFX4-211ENST00000552866 SHROOM4Q9ULL8 1493 aa9.6□□□□□ -0.87
RFX4-211ENST00000552866 ATP9BO43861 1147 aa9.6□□□□□ -0.87
RFX4-211ENST00000552866 GABBR2O75899 941 aa9.6□□□□□ -0.87
RFX4-211ENST00000552866 ELOAQ14241 798 aaKnown RBP9.6□□□□□ -0.87
RFX4-211ENST00000552866 TBC1D9Q6ZT07 1266 aa9.6□□□□□ -0.87
RFX4-211ENST00000552866 SLF2Q8IX21 1173 aa9.6□□□□□ -0.87
RFX4-211ENST00000552866 EPS8L1Q8TE68 723 aa9.6□□□□□ -0.87
RFX4-211ENST00000552866 HLA-CQ95604 372 aa9.6□□□□□ -0.87
RFX4-211ENST00000552866 MYT1LQ9UL68 1186 aa9.6□□□□□ -0.87
RFX4-211ENST00000552866 PNMA1Q8ND90 353 aa9.59□□□□□ -0.87
RFX4-211ENST00000552866 RIMBP2O15034 1052 aa9.58□□□□□ -0.88
RFX4-211ENST00000552866 EIF4G2P78344 907 aaKnown RBP eCLIP9.58□□□□□ -0.88
RFX4-211ENST00000552866 SMAPO00193 183 aa9.57□□□□□ -0.88
RFX4-211ENST00000552866 SLC10A3P09131 477 aa9.57□□□□□ -0.88
RFX4-211ENST00000552866 GPR153Q6NV75 609 aa9.57□□□□□ -0.88
RFX4-211ENST00000552866 CCER1Q8TC90 406 aaPredicted RBP9.57□□□□□ -0.88
RFX4-211ENST00000552866 LHX6Q9UPM6 363 aa9.57□□□□□ -0.88
RFX4-211ENST00000552866 RBM47A0AV96 593 aaKnown RBP9.56□□□□□ -0.88
RFX4-211ENST00000552866 C6orf229H3BNL8 230 aa9.56□□□□□ -0.88
RFX4-211ENST00000552866 HOXB3P14651 431 aaPredicted RBP9.55□□□□□ -0.88
RFX4-211ENST00000552866 NR6A1Q15406 480 aa9.55□□□□□ -0.88
RFX4-211ENST00000552866 GRIPAP1Q4V328 841 aa9.55□□□□□ -0.88
RFX4-211ENST00000552866 KANK4Q5T7N3 995 aaPredicted RBP9.55□□□□□ -0.88
RFX4-211ENST00000552866 TXNDC2Q86VQ3 553 aa9.55□□□□□ -0.88
RFX4-211ENST00000552866 ZMIZ1Q9ULJ6 1067 aa9.55□□□□□ -0.88
RFX4-211ENST00000552866 UNCXA6NJT0 531 aa9.54□□□□□ -0.88
RFX4-211ENST00000552866 ERCC3P19447 782 aa9.53□□□□□ -0.88
RFX4-211ENST00000552866 TMEM164Q5U3C3 297 aa9.53□□□□□ -0.88
RFX4-211ENST00000552866 NFATC2IPQ8NCF5 419 aa9.53□□□□□ -0.88
RFX4-211ENST00000552866 NR1H3Q13133 447 aa9.52□□□□□ -0.89
RFX4-211ENST00000552866 PROX2Q3B8N5 592 aa9.52□□□□□ -0.89
RFX4-211ENST00000552866 SWT1Q5T5J6 900 aaKnown RBP9.52□□□□□ -0.89
RFX4-211ENST00000552866 STK32AQ8WU08 396 aa9.52□□□□□ -0.89
RFX4-211ENST00000552866 NOVA2Q9UNW9 492 aaKnown RBP9.51□□□□□ -0.89
RFX4-211ENST00000552866 IGSF5Q9NSI5 407 aa9.5□□□□□ -0.89
RFX4-211ENST00000552866 USP17L3A6NCW0 530 aa9.49□□□□□ -0.89
RFX4-211ENST00000552866 USP17L4A6NCW7 530 aa9.49□□□□□ -0.89
RFX4-211ENST00000552866 PER1O15534 1290 aaPredicted RBP9.49□□□□□ -0.89
RFX4-211ENST00000552866 FUT2Q10981 343 aa9.49□□□□□ -0.89
RFX4-211ENST00000552866 PHLDB3Q6NSJ2 640 aa9.49□□□□□ -0.89
RFX4-211ENST00000552866 USP17L2Q6R6M4 530 aa9.49□□□□□ -0.89
RFX4-211ENST00000552866 USP17L1Q7RTZ2 530 aa9.49□□□□□ -0.89
RFX4-211ENST00000552866 PLEKHM2Q8IWE5 1019 aa9.49□□□□□ -0.89
RFX4-211ENST00000552866 FAM196BA6NMK8 535 aa9.48□□□□□ -0.89
RFX4-211ENST00000552866 PIK3CDO00329 1044 aa9.48□□□□□ -0.89
RFX4-211ENST00000552866 SLC4A3P48751 1232 aa9.48□□□□□ -0.89
RFX4-211ENST00000552866 DESI1Q6ICB0 168 aa9.48□□□□□ -0.89
RFX4-211ENST00000552866 DNAJC14Q6Y2X3 702 aaPredicted RBP9.48□□□□□ -0.89
RFX4-211ENST00000552866 ARID4AP29374 1257 aaPredicted RBP9.47□□□□□ -0.89
RFX4-211ENST00000552866 RETREG3Q86VR2 466 aa9.47□□□□□ -0.89
RFX4-211ENST00000552866 KIAA1468Q9P260 1216 aa9.47□□□□□ -0.89
RFX4-211ENST00000552866 ZBBXA8MT70 800 aa9.46□□□□□ -0.9
RFX4-211ENST00000552866 USP17L5A8MUK1 530 aa9.46□□□□□ -0.9
RFX4-211ENST00000552866 FBXO45P0C2W1 286 aa9.46□□□□□ -0.9
RFX4-211ENST00000552866 SSFA2P28290 1259 aa9.46□□□□□ -0.9
RFX4-211ENST00000552866 ATP6V1AP38606 617 aa9.46□□□□□ -0.9
RFX4-211ENST00000552866 SYMPKQ92797 1274 aaKnown RBP9.46□□□□□ -0.9
RFX4-211ENST00000552866 USP17L15C9J2P7 530 aa9.45□□□□□ -0.9
RFX4-211ENST00000552866 USP17L10C9JJH3 530 aa9.45□□□□□ -0.9
RFX4-211ENST00000552866 USP17L13C9JLJ4 530 aa9.45□□□□□ -0.9
RFX4-211ENST00000552866 USP17L12C9JPN9 530 aa9.45□□□□□ -0.9
RFX4-211ENST00000552866 USP17L11C9JVI0 530 aa9.45□□□□□ -0.9
RFX4-211ENST00000552866 USP17L21D6R901 530 aa9.45□□□□□ -0.9
RFX4-211ENST00000552866 USP17L18D6R9N7 530 aa9.45□□□□□ -0.9
RFX4-211ENST00000552866 USP17L22D6RA61 530 aa9.45□□□□□ -0.9
RFX4-211ENST00000552866 USP17L17D6RBQ6 530 aa9.45□□□□□ -0.9
RFX4-211ENST00000552866 USP17L19D6RCP7 530 aa9.45□□□□□ -0.9
RFX4-211ENST00000552866 USP17L20D6RJB6 530 aa9.45□□□□□ -0.9
RFX4-211ENST00000552866 CFHP08603 1231 aa9.45□□□□□ -0.9
RFX4-211ENST00000552866 USP17L24Q0WX57 530 aa9.45□□□□□ -0.9
RFX4-211ENST00000552866 KCNH8Q96L42 1107 aa9.45□□□□□ -0.9
RFX4-211ENST00000552866 KCNK17Q96T54 332 aa9.45□□□□□ -0.9
RFX4-211ENST00000552866 USP35Q9P2H5 1018 aa9.45□□□□□ -0.9
RFX4-211ENST00000552866 SKIP12755 728 aa9.44□□□□□ -0.9
RFX4-211ENST00000552866 HDGFP51858 240 aaKnown RBP9.44□□□□□ -0.9
RFX4-211ENST00000552866 ZC3H4Q9UPT8 1303 aaKnown RBP9.43□□□□□ -0.9
RFX4-211ENST00000552866 SOWAHDA6NJG2 315 aa9.43□□□□□ -0.9
RFX4-211ENST00000552866 CLP1Q92989 425 aaKnown RBP9.43□□□□□ -0.9
RFX4-211ENST00000552866 ZBED2Q9BTP6 218 aa9.43□□□□□ -0.9
RFX4-211ENST00000552866 KIAA1522Q9P206 1035 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms