RNA–Protein interactions for RNA: ENST00000552810.5

CEP290-207, Transcript of centrosomal protein 290, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CEP290, Length 7,948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-207ENST00000552810 SMC2O95347 1197 aa9.37□□□□□ -0.91
CEP290-207ENST00000552810 MRE11P49959 708 aa9.36□□□□□ -0.91
CEP290-207ENST00000552810 COMMD10Q9Y6G5 202 aa9.36□□□□□ -0.91
CEP290-207ENST00000552810 CCDC39Q9UFE4 941 aa9.36□□□□□ -0.91
CEP290-207ENST00000552810 RWDD1Q9H446 243 aaPredicted RBP9.36□□□□□ -0.91
CEP290-207ENST00000552810 NPM1P06748 294 aaKnown RBP eCLIP9.36□□□□□ -0.91
CEP290-207ENST00000552810 PIBF1Q8WXW3 757 aa9.36□□□□□ -0.91
CEP290-207ENST00000552810 KAT6BQ8WYB5 2073 aa9.35□□□□□ -0.91
CEP290-207ENST00000552810 CGNQ9P2M7 1197 aaKnown RBP9.35□□□□□ -0.91
CEP290-207ENST00000552810 STAMBPO95630 424 aa9.35□□□□□ -0.91
CEP290-207ENST00000552810 PRKG1Q13976 671 aa9.35□□□□□ -0.91
CEP290-207ENST00000552810 GOLGA6L7A0A1B0GV03 622 aa9.35□□□□□ -0.91
CEP290-207ENST00000552810 SMC1AQ14683 1233 aaKnown RBP9.35□□□□□ -0.91
CEP290-207ENST00000552810 HSP90AB4PQ58FF6 505 aa9.35□□□□□ -0.91
CEP290-207ENST00000552810 SHTN1A0MZ66 631 aa9.35□□□□□ -0.91
CEP290-207ENST00000552810 GTF2E1P29083 439 aaPredicted RBP9.35□□□□□ -0.91
CEP290-207ENST00000552810 PAXIP1Q6ZW49 1069 aaPredicted RBP9.34□□□□□ -0.91
CEP290-207ENST00000552810 CAVIN1Q6NZI2 390 aaKnown RBP9.34□□□□□ -0.91
CEP290-207ENST00000552810 RNF20Q5VTR2 975 aa9.34□□□□□ -0.91
CEP290-207ENST00000552810 STK3Q13188 491 aa9.34□□□□□ -0.91
CEP290-207ENST00000552810 POLR3GO15318 223 aaPredicted RBP9.34□□□□□ -0.91
CEP290-207ENST00000552810 NFKBIBQ15653 356 aa9.33□□□□□ -0.92
CEP290-207ENST00000552810 KIF3AQ9Y496 699 aa9.33□□□□□ -0.92
CEP290-207ENST00000552810 VGLL3A8MV65 326 aa9.32□□□□□ -0.92
CEP290-207ENST00000552810 NFXL1Q6ZNB6 911 aa9.32□□□□□ -0.92
CEP290-207ENST00000552810 OFD1O75665 1012 aa9.32□□□□□ -0.92
CEP290-207ENST00000552810 GBP2P32456 591 aaPredicted RBP9.32□□□□□ -0.92
CEP290-207ENST00000552810 ACBD3Q9H3P7 528 aa9.32□□□□□ -0.92
CEP290-207ENST00000552810 FAM161AQ3B820 660 aa9.32□□□□□ -0.92
CEP290-207ENST00000552810 ATP6V1E1P36543 226 aa9.32□□□□□ -0.92
CEP290-207ENST00000552810 AKAP17AQ02040 695 aaKnown RBP9.31□□□□□ -0.92
CEP290-207ENST00000552810 CHMP4BQ9H444 224 aaKnown RBP9.31□□□□□ -0.92
CEP290-207ENST00000552810 CCDC113Q9H0I3 377 aa9.31□□□□□ -0.92
CEP290-207ENST00000552810 NOP2P46087 812 aaKnown RBP9.31□□□□□ -0.92
CEP290-207ENST00000552810 HSP90B2PQ58FF3 399 aa9.31□□□□□ -0.92
CEP290-207ENST00000552810 PRPF31Q8WWY3 499 aaKnown RBP9.31□□□□□ -0.92
CEP290-207ENST00000552810 PRPF40AO75400 957 aaKnown RBP9.3□□□□□ -0.92
CEP290-207ENST00000552810 WHAMMQ8TF30 809 aa9.3□□□□□ -0.92
CEP290-207ENST00000552810 DDX11L8A8MPP1 907 aa9.3□□□□□ -0.92
CEP290-207ENST00000552810 CT47B1P0C2W7 299 aaPredicted RBP9.3□□□□□ -0.92
CEP290-207ENST00000552810 CHMP4BP1P59074 171 aa9.3□□□□□ -0.92
CEP290-207ENST00000552810 FAM170AA1A519 330 aa9.3□□□□□ -0.92
CEP290-207ENST00000552810 ST18O60284 1047 aa9.3□□□□□ -0.92
CEP290-207ENST00000552810 ZRANB2O95218 330 aaKnown RBP eCLIP9.3□□□□□ -0.92
CEP290-207ENST00000552810 ZBTB41Q5SVQ8 909 aa9.3□□□□□ -0.92
CEP290-207ENST00000552810 CHMP2AO43633 222 aa9.3□□□□□ -0.92
CEP290-207ENST00000552810 RGS22Q8NE09 1264 aa9.3□□□□□ -0.92
CEP290-207ENST00000552810 MYO15BQ96JP2 1530 aa9.29□□□□□ -0.92
CEP290-207ENST00000552810 MRPS9P82933 396 aaKnown RBP9.29□□□□□ -0.92
CEP290-207ENST00000552810 FEZ1Q99689 392 aa9.29□□□□□ -0.92
CEP290-207ENST00000552810 SASS6Q6UVJ0 657 aa9.29□□□□□ -0.92
CEP290-207ENST00000552810 C1orf115Q9H7X2 142 aa9.29□□□□□ -0.92
CEP290-207ENST00000552810 SPINK5Q9NQ38 1064 aaPredicted RBP9.29□□□□□ -0.92
CEP290-207ENST00000552810 CCDC102AQ96A19 550 aa9.29□□□□□ -0.92
CEP290-207ENST00000552810 CA8P35219 290 aa9.29□□□□□ -0.92
CEP290-207ENST00000552810 PPFIA3O75145 1194 aa9.29□□□□□ -0.92
CEP290-207ENST00000552810 ZHX3Q9H4I2 956 aa9.29□□□□□ -0.92
CEP290-207ENST00000552810 MTUS2Q5JR59 1369 aa9.28□□□□□ -0.92
CEP290-207ENST00000552810 MYCNP04198 464 aaPredicted RBP9.28□□□□□ -0.92
CEP290-207ENST00000552810 HSP90AA5PQ58FG0 334 aa9.28□□□□□ -0.92
CEP290-207ENST00000552810 TRIM5Q9C035 493 aa9.28□□□□□ -0.92
CEP290-207ENST00000552810 TMCO5BA8MYB1 307 aa9.28□□□□□ -0.92
CEP290-207ENST00000552810 SYTL4Q96C24 671 aaPredicted RBP9.28□□□□□ -0.92
CEP290-207ENST00000552810 RBM33Q96EV2 1170 aaKnown RBP9.28□□□□□ -0.92
CEP290-207ENST00000552810 KIF3BO15066 747 aa9.28□□□□□ -0.92
CEP290-207ENST00000552810 SF3A3Q12874 501 aaKnown RBP eCLIP9.28□□□□□ -0.92
CEP290-207ENST00000552810 TRMT1LQ7Z2T5 733 aaKnown RBP9.27□□□□□ -0.92
CEP290-207ENST00000552810 NASPP49321 788 aaPredicted RBP9.27□□□□□ -0.93
CEP290-207ENST00000552810 SYCP1Q15431 976 aa9.27□□□□□ -0.93
CEP290-207ENST00000552810 RNF187Q5TA31 235 aaPredicted RBP9.27□□□□□ -0.93
CEP290-207ENST00000552810 MPHOSPH6Q99547 160 aaKnown RBP9.27□□□□□ -0.93
CEP290-207ENST00000552810 SATB1Q01826 763 aa9.27□□□□□ -0.93
CEP290-207ENST00000552810 ANKRD20A12PQ8NF67 263 aa9.27□□□□□ -0.93
CEP290-207ENST00000552810 CCDC129Q6ZRS4 1044 aa9.27□□□□□ -0.93
CEP290-207ENST00000552810 HDAC5Q9UQL6 1122 aa9.27□□□□□ -0.93
CEP290-207ENST00000552810 LNPKQ9C0E8 428 aa9.27□□□□□ -0.93
CEP290-207ENST00000552810 FERP16591 822 aa9.26□□□□□ -0.93
CEP290-207ENST00000552810 ANAPC15P60006 121 aa9.26□□□□□ -0.93
CEP290-207ENST00000552810 DDX54Q8TDD1 881 aaKnown RBP9.26□□□□□ -0.93
CEP290-207ENST00000552810 GTF2F1P35269 517 aaKnown RBP eCLIP9.26□□□□□ -0.93
CEP290-207ENST00000552810 UBE4AQ14139 1066 aa9.26□□□□□ -0.93
CEP290-207ENST00000552810 DAAM2Q86T65 1068 aa9.26□□□□□ -0.93
CEP290-207ENST00000552810 CCDC47Q96A33 483 aaKnown RBP9.26□□□□□ -0.93
CEP290-207ENST00000552810 SH3BP5O60239 455 aa9.26□□□□□ -0.93
CEP290-207ENST00000552810 IKQ13123 557 aaPredicted RBP9.26□□□□□ -0.93
CEP290-207ENST00000552810 CCDC89Q8N998 374 aa9.26□□□□□ -0.93
CEP290-207ENST00000552810 TRIM55Q9BYV6 548 aa9.26□□□□□ -0.93
CEP290-207ENST00000552810 AIMP1Q12904 312 aaKnown RBP9.26□□□□□ -0.93
CEP290-207ENST00000552810 PMFBP1Q8TBY8 1022 aa9.26□□□□□ -0.93
CEP290-207ENST00000552810 LARP6Q9BRS8 491 aaKnown RBP9.26□□□□□ -0.93
CEP290-207ENST00000552810 CCDC66A2RUB6 948 aa9.26□□□□□ -0.93
CEP290-207ENST00000552810 ECM2O94769 699 aaPredicted RBP9.26□□□□□ -0.93
CEP290-207ENST00000552810 FAM107BQ9H098 131 aa9.26□□□□□ -0.93
CEP290-207ENST00000552810 STK31Q9BXU1 1019 aa9.25□□□□□ -0.93
CEP290-207ENST00000552810 CWC15Q9P013 229 aaKnown RBP9.25□□□□□ -0.93
CEP290-207ENST00000552810 CAMK4Q16566 473 aa9.25□□□□□ -0.93
CEP290-207ENST00000552810 CSPP1Q1MSJ5 1256 aa9.25□□□□□ -0.93
CEP290-207ENST00000552810 ZNF652Q9Y2D9 606 aa9.25□□□□□ -0.93
CEP290-207ENST00000552810 PABPN1LA6NDY0 278 aaKnown RBP9.25□□□□□ -0.93
CEP290-207ENST00000552810 FIBPO43427 364 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms