RNA–Protein interactions for RNA: ENST00000552713.5

CDK4-213, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-213ENST00000552713 SOS2Q07890 1332 aaPredicted RBP13.09□□□□□ -0.31
CDK4-213ENST00000552713 ITGAEP38570 1179 aa13.08□□□□□ -0.32
CDK4-213ENST00000552713 ROBO2Q9HCK4 1378 aa13.07□□□□□ -0.32
CDK4-213ENST00000552713 ATRNO75882 1429 aa13.07□□□□□ -0.32
CDK4-213ENST00000552713 FNBP4Q8N3X1 1017 aaPredicted RBP13.07□□□□□ -0.32
CDK4-213ENST00000552713 BRWD3Q6RI45 1802 aa13.06□□□□□ -0.32
CDK4-213ENST00000552713 TRPC5Q9UL62 973 aaPredicted RBP13.06□□□□□ -0.32
CDK4-213ENST00000552713 PTCH1Q13635 1447 aa13.05□□□□□ -0.32
CDK4-213ENST00000552713 SRCAPQ6ZRS2 3230 aa13.05□□□□□ -0.32
CDK4-213ENST00000552713 BCL9LQ86UU0 1499 aa13.04□□□□□ -0.32
CDK4-213ENST00000552713 ZRANB1Q9UGI0 708 aa13.04□□□□□ -0.32
CDK4-213ENST00000552713 PPLO60437 1756 aa13.04□□□□□ -0.32
CDK4-213ENST00000552713 MYOM2P54296 1465 aa13.04□□□□□ -0.32
CDK4-213ENST00000552713 EP400Q96L91 3159 aa13.02□□□□□ -0.32
CDK4-213ENST00000552713 PXDNQ92626 1479 aa13.02□□□□□ -0.33
CDK4-213ENST00000552713 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.02□□□□□ -0.33
CDK4-213ENST00000552713 XPCQ01831 940 aaPredicted RBP13.01□□□□□ -0.33
CDK4-213ENST00000552713 GLI3P10071 1580 aa13.01□□□□□ -0.33
CDK4-213ENST00000552713 PRAG1Q86YV5 1406 aa13□□□□□ -0.33
CDK4-213ENST00000552713 RGPD8O14715 1765 aaPredicted RBP12.99□□□□□ -0.33
CDK4-213ENST00000552713 PPARGC1BQ86YN6 1023 aaKnown RBP12.99□□□□□ -0.33
CDK4-213ENST00000552713 RNF216Q9NWF9 866 aaPredicted RBP12.99□□□□□ -0.33
CDK4-213ENST00000552713 CDC42BPGQ6DT37 1551 aa12.98□□□□□ -0.33
CDK4-213ENST00000552713 ESCO1Q5FWF5 840 aa12.98□□□□□ -0.33
CDK4-213ENST00000552713 GJD4Q96KN9 370 aaPredicted RBP12.98□□□□□ -0.33
CDK4-213ENST00000552713 HFM1A2PYH4 1435 aa12.97□□□□□ -0.33
CDK4-213ENST00000552713 FOXO3O43524 673 aa12.97□□□□□ -0.33
CDK4-213ENST00000552713 RALGAPBQ86X10 1494 aa12.97□□□□□ -0.33
CDK4-213ENST00000552713 NPHP3Q7Z494 1330 aa12.96□□□□□ -0.33
CDK4-213ENST00000552713 NUTM2FA1L443 756 aa12.96□□□□□ -0.33
CDK4-213ENST00000552713 VGFO15240 615 aaPredicted RBP12.96□□□□□ -0.33
CDK4-213ENST00000552713 DEFB132Q7Z7B7 95 aa12.96□□□□□ -0.33
CDK4-213ENST00000552713 CCDC125Q86Z20 511 aa12.96□□□□□ -0.33
CDK4-213ENST00000552713 CNKSR2Q8WXI2 1034 aa12.96□□□□□ -0.33
CDK4-213ENST00000552713 SLIT2O94813 1529 aa12.95□□□□□ -0.34
CDK4-213ENST00000552713 FMN2Q9NZ56 1722 aa12.94□□□□□ -0.34
CDK4-213ENST00000552713 USP32Q8NFA0 1604 aa12.94□□□□□ -0.34
CDK4-213ENST00000552713 BLMP54132 1417 aaPredicted RBP12.94□□□□□ -0.34
CDK4-213ENST00000552713 NAIPQ13075 1403 aa12.94□□□□□ -0.34
CDK4-213ENST00000552713 PLCH1Q4KWH8 1693 aa12.93□□□□□ -0.34
CDK4-213ENST00000552713 WAPLQ7Z5K2 1190 aa12.93□□□□□ -0.34
CDK4-213ENST00000552713 UNC5CLQ8IV45 518 aa12.93□□□□□ -0.34
CDK4-213ENST00000552713 LRP5O75197 1615 aa12.92□□□□□ -0.34
CDK4-213ENST00000552713 ABCA3Q99758 1704 aa12.92□□□□□ -0.34
CDK4-213ENST00000552713 IFT172Q9UG01 1749 aa12.92□□□□□ -0.34
CDK4-213ENST00000552713 PLEKHH1Q9ULM0 1364 aa12.92□□□□□ -0.34
CDK4-213ENST00000552713 RPGRIP1LQ68CZ1 1315 aa12.91□□□□□ -0.34
CDK4-213ENST00000552713 KNDC1Q76NI1 1749 aa12.91□□□□□ -0.34
CDK4-213ENST00000552713 STK26Q9P289 416 aa12.91□□□□□ -0.34
CDK4-213ENST00000552713 SPATA31A3Q5VYP0 1347 aa12.9□□□□□ -0.34
CDK4-213ENST00000552713 ADGRF5Q8IZF2 1346 aa12.9□□□□□ -0.34
CDK4-213ENST00000552713 KIF1AQ12756 1690 aa12.9□□□□□ -0.34
CDK4-213ENST00000552713 NWD2Q9ULI1 1742 aa12.9□□□□□ -0.34
CDK4-213ENST00000552713 SEPT12Q8IYM1 358 aa12.89□□□□□ -0.35
CDK4-213ENST00000552713 TECPR2O15040 1411 aa12.88□□□□□ -0.35
CDK4-213ENST00000552713 PLEKHG5O94827 1062 aa12.88□□□□□ -0.35
CDK4-213ENST00000552713 TMEM132EQ6IEE7 984 aa12.88□□□□□ -0.35
CDK4-213ENST00000552713 CABLES1Q8TDN4 633 aa12.88□□□□□ -0.35
CDK4-213ENST00000552713 LRPPRCP42704 1394 aaKnown RBP12.88□□□□□ -0.35
CDK4-213ENST00000552713 RRBP1Q9P2E9 1410 aaKnown RBP12.87□□□□□ -0.35
CDK4-213ENST00000552713 NRAPQ86VF7 1730 aa12.86□□□□□ -0.35
CDK4-213ENST00000552713 PSDA5PKW4 1024 aaPredicted RBP12.86□□□□□ -0.35
CDK4-213ENST00000552713 KRT28Q7Z3Y7 464 aa12.86□□□□□ -0.35
CDK4-213ENST00000552713 VPS72Q15906 364 aa12.85□□□□□ -0.35
CDK4-213ENST00000552713 SLC4A1APQ9BWU0 796 aaKnown RBP12.85□□□□□ -0.35
CDK4-213ENST00000552713 CCDC144AA2RUR9 1427 aa12.85□□□□□ -0.35
CDK4-213ENST00000552713 ABCC11Q96J66 1382 aa12.84□□□□□ -0.35
CDK4-213ENST00000552713 ONECUT3O60422 494 aaPredicted RBP12.84□□□□□ -0.35
CDK4-213ENST00000552713 SF3B2Q13435 895 aaKnown RBP12.84□□□□□ -0.35
CDK4-213ENST00000552713 RGL3Q3MIN7 710 aa12.84□□□□□ -0.35
CDK4-213ENST00000552713 KRT27Q7Z3Y8 459 aa12.84□□□□□ -0.35
CDK4-213ENST00000552713 TNS3Q68CZ2 1445 aa12.84□□□□□ -0.35
CDK4-213ENST00000552713 SPATA31E1Q6ZUB1 1445 aa12.83□□□□□ -0.36
CDK4-213ENST00000552713 YTHDC2Q9H6S0 1430 aaKnown RBP12.82□□□□□ -0.36
CDK4-213ENST00000552713 FAM83GA6ND36 823 aa12.82□□□□□ -0.36
CDK4-213ENST00000552713 HRCP23327 699 aa12.82□□□□□ -0.36
CDK4-213ENST00000552713 CCDC9Q9Y3X0 531 aaKnown RBP12.82□□□□□ -0.36
CDK4-213ENST00000552713 RGPD1P0DJD0 1748 aa12.82□□□□□ -0.36
CDK4-213ENST00000552713 TRPM3Q9HCF6 1732 aaPredicted RBP12.82□□□□□ -0.36
CDK4-213ENST00000552713 PIK3C2GO75747 1445 aa12.81□□□□□ -0.36
CDK4-213ENST00000552713 HAP1P54257 671 aaPredicted RBP12.81□□□□□ -0.36
CDK4-213ENST00000552713 PHF8Q9UPP1 1060 aa12.81□□□□□ -0.36
CDK4-213ENST00000552713 TNS1Q9HBL0 1735 aaKnown RBP12.81□□□□□ -0.36
CDK4-213ENST00000552713 NRXN1Q9ULB1 1477 aa12.8□□□□□ -0.36
CDK4-213ENST00000552713 FAM182BQ5T319 152 aa12.8□□□□□ -0.36
CDK4-213ENST00000552713 LMOD2Q6P5Q4 547 aa12.8□□□□□ -0.36
CDK4-213ENST00000552713 EN1Q05925 392 aaPredicted RBP12.79□□□□□ -0.36
CDK4-213ENST00000552713 FAM98CQ17RN3 349 aaKnown RBP12.79□□□□□ -0.36
CDK4-213ENST00000552713 ALS2Q96Q42 1657 aa12.79□□□□□ -0.36
CDK4-213ENST00000552713 SBNO1A3KN83 1393 aa12.79□□□□□ -0.36
CDK4-213ENST00000552713 ANKRD30BQ9BXX2 1392 aa12.79□□□□□ -0.36
CDK4-213ENST00000552713 CRYBG1Q9Y4K1 1723 aa12.79□□□□□ -0.36
CDK4-213ENST00000552713 BAG6P46379 1132 aa12.78□□□□□ -0.36
CDK4-213ENST00000552713 PSME1Q06323 249 aa12.78□□□□□ -0.36
CDK4-213ENST00000552713 COL14A1Q05707 1796 aaKnown RBP12.77□□□□□ -0.36
CDK4-213ENST00000552713 A0A0G2JS52 829 aa12.77□□□□□ -0.37
CDK4-213ENST00000552713 MYT1Q01538 1121 aa12.77□□□□□ -0.37
CDK4-213ENST00000552713 SAFB2Q14151 953 aaKnown RBP eCLIP12.77□□□□□ -0.37
CDK4-213ENST00000552713 PMFBP1Q8TBY8 1022 aa12.77□□□□□ -0.37
CDK4-213ENST00000552713 THSD7AQ9UPZ6 1657 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms