RNA–Protein interactions for RNA: ENST00000552352.1

RPH3A-223, Transcript of rabphilin 3A, human

TSL 3

Gene RPH3A, Length 2,535 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPH3A-223	ENST00000552352	PIK3C2G	O75747	1445 aa		10.44	□□□□□ -0.74
RPH3A-223	ENST00000552352	SLC4A3	P48751	1232 aa		10.43	□□□□□ -0.74
RPH3A-223	ENST00000552352	C8orf34	Q49A92	452 aa		10.43	□□□□□ -0.74
RPH3A-223	ENST00000552352	UBE2Q2	Q8WVN8	375 aa		10.43	□□□□□ -0.74
RPH3A-223	ENST00000552352	NPC1L1	Q9UHC9	1359 aa		10.43	□□□□□ -0.74
RPH3A-223	ENST00000552352	ZFYVE9	O95405	1425 aa		10.43	□□□□□ -0.74
RPH3A-223	ENST00000552352	SIGLEC1	Q9BZZ2	1709 aa		10.43	□□□□□ -0.74
RPH3A-223	ENST00000552352	C20orf194	Q5TEA3	1177 aa		10.43	□□□□□ -0.74
RPH3A-223	ENST00000552352	YEATS2	Q9ULM3	1422 aa		10.42	□□□□□ -0.74
RPH3A-223	ENST00000552352	MYOM1	P52179	1685 aa		10.42	□□□□□ -0.74
RPH3A-223	ENST00000552352	KDM5A	P29375	1690 aa	Known RBP	10.41	□□□□□ -0.74
RPH3A-223	ENST00000552352	ADGRB1	O14514	1584 aa		10.41	□□□□□ -0.74
RPH3A-223	ENST00000552352	RAPGEF3	O95398	923 aa		10.41	□□□□□ -0.74
RPH3A-223	ENST00000552352	NEXMIF	Q5QGS0	1516 aa		10.4	□□□□□ -0.74
RPH3A-223	ENST00000552352	AMER1	Q5JTC6	1135 aa	Predicted RBP	10.4	□□□□□ -0.74
RPH3A-223	ENST00000552352	CC2D1B	Q5T0F9	858 aa	Known RBP	10.4	□□□□□ -0.74
RPH3A-223	ENST00000552352	PREX1	Q8TCU6	1659 aa		10.4	□□□□□ -0.75
RPH3A-223	ENST00000552352	CYB5RL	Q6IPT4	315 aa		10.4	□□□□□ -0.75
RPH3A-223	ENST00000552352	FAM43A	Q8N2R8	423 aa		10.4	□□□□□ -0.75
RPH3A-223	ENST00000552352	VIRMA	Q69YN4	1812 aa	Known RBP	10.39	□□□□□ -0.75
RPH3A-223	ENST00000552352	FRAT2	O75474	233 aa	Predicted RBP	10.39	□□□□□ -0.75
RPH3A-223	ENST00000552352	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	10.39	□□□□□ -0.75
RPH3A-223	ENST00000552352	ADGRF5	Q8IZF2	1346 aa		10.39	□□□□□ -0.75
RPH3A-223	ENST00000552352	DUSP27	Q5VZP5	1158 aa		10.39	□□□□□ -0.75
RPH3A-223	ENST00000552352	SLC52A1	Q9NWF4	448 aa		10.38	□□□□□ -0.75
RPH3A-223	ENST00000552352	ARHGEF40	Q8TER5	1519 aa		10.38	□□□□□ -0.75
RPH3A-223	ENST00000552352	ERVK-7	P63135	1459 aa		10.38	□□□□□ -0.75
RPH3A-223	ENST00000552352	RSPH6A	Q9H0K4	717 aa		10.38	□□□□□ -0.75
RPH3A-223	ENST00000552352	C14orf93	Q9H972	538 aa	Known RBP	10.38	□□□□□ -0.75
RPH3A-223	ENST00000552352	PANK3	Q9H999	370 aa		10.38	□□□□□ -0.75
RPH3A-223	ENST00000552352	GGT6	Q6P531	493 aa		10.37	□□□□□ -0.75
RPH3A-223	ENST00000552352	PUS7	Q96PZ0	661 aa	Known RBP	10.37	□□□□□ -0.75
RPH3A-223	ENST00000552352	PLEKHH1	Q9ULM0	1364 aa		10.37	□□□□□ -0.75
RPH3A-223	ENST00000552352	ZNF521	Q96K83	1311 aa		10.37	□□□□□ -0.75
RPH3A-223	ENST00000552352	ASXL1	Q8IXJ9	1541 aa		10.37	□□□□□ -0.75
RPH3A-223	ENST00000552352	ADAMTS8	Q9UP79	889 aa		10.37	□□□□□ -0.75
RPH3A-223	ENST00000552352	TMEM131L	A2VDJ0	1609 aa		10.36	□□□□□ -0.75
RPH3A-223	ENST00000552352	FAM69C	Q0P6D2	419 aa		10.36	□□□□□ -0.75
RPH3A-223	ENST00000552352	KIF13A	Q9H1H9	1805 aa		10.35	□□□□□ -0.75
RPH3A-223	ENST00000552352	EIF5B	O60841	1220 aa	Known RBP	10.35	□□□□□ -0.75
RPH3A-223	ENST00000552352	SLC4A2	P04920	1241 aa		10.35	□□□□□ -0.75
RPH3A-223	ENST00000552352	CFAP70	Q5T0N1	1121 aa		10.35	□□□□□ -0.75
RPH3A-223	ENST00000552352	SPATA31D1	Q6ZQQ2	1576 aa		10.35	□□□□□ -0.75
RPH3A-223	ENST00000552352	GOLGA2	Q08379	1002 aa		10.35	□□□□□ -0.75
RPH3A-223	ENST00000552352	USP32	Q8NFA0	1604 aa		10.34	□□□□□ -0.75
RPH3A-223	ENST00000552352	QRICH2	Q9H0J4	1663 aa		10.34	□□□□□ -0.75
RPH3A-223	ENST00000552352	VGF	O15240	615 aa	Predicted RBP	10.34	□□□□□ -0.75
RPH3A-223	ENST00000552352	RGS3	P49796	1198 aa		10.34	□□□□□ -0.75
RPH3A-223	ENST00000552352	WDR43	Q15061	677 aa	Known RBP eCLIP	10.34	□□□□□ -0.75
RPH3A-223	ENST00000552352	ARHGEF28	Q8N1W1	1705 aa	Known RBP	10.33	□□□□□ -0.76
RPH3A-223	ENST00000552352	SLFN5	Q08AF3	891 aa		10.33	□□□□□ -0.76
RPH3A-223	ENST00000552352	PPP2R1A	P30153	589 aa		10.32	□□□□□ -0.76
RPH3A-223	ENST00000552352	CENPJ	Q9HC77	1338 aa	Predicted RBP	10.32	□□□□□ -0.76
RPH3A-223	ENST00000552352	TRMT2A	Q8IZ69	625 aa	Known RBP	10.32	□□□□□ -0.76
RPH3A-223	ENST00000552352	USP19	O94966	1318 aa		10.32	□□□□□ -0.76
RPH3A-223	ENST00000552352	NKTR	P30414	1462 aa	Known RBP	10.31	□□□□□ -0.76
RPH3A-223	ENST00000552352	KNSTRN	Q9Y448	316 aa		10.31	□□□□□ -0.76
RPH3A-223	ENST00000552352	TSPOAP1	O95153	1857 aa		10.3	□□□□□ -0.76
RPH3A-223	ENST00000552352	BECN1	Q14457	450 aa		10.3	□□□□□ -0.76
RPH3A-223	ENST00000552352	L1TD1	Q5T7N2	865 aa	Known RBP	10.3	□□□□□ -0.76
RPH3A-223	ENST00000552352	NINL	Q9Y2I6	1382 aa		10.29	□□□□□ -0.76
RPH3A-223	ENST00000552352	MAPK8IP3	Q9UPT6	1336 aa		10.29	□□□□□ -0.76
RPH3A-223	ENST00000552352	IDI1	Q13907	227 aa		10.29	□□□□□ -0.76
RPH3A-223	ENST00000552352	POGK	Q9P215	609 aa		10.29	□□□□□ -0.76
RPH3A-223	ENST00000552352	NLRP1	Q9C000	1473 aa		10.29	□□□□□ -0.76
RPH3A-223	ENST00000552352	CLTC	Q00610	1675 aa	Known RBP	10.29	□□□□□ -0.76
RPH3A-223	ENST00000552352	CFAP65	Q6ZU64	1925 aa	Known RBP	10.28	□□□□□ -0.76
RPH3A-223	ENST00000552352	MYO5B	Q9ULV0	1848 aa		10.28	□□□□□ -0.76
RPH3A-223	ENST00000552352	CGNL1	Q0VF96	1302 aa		10.28	□□□□□ -0.76
RPH3A-223	ENST00000552352	DLC1	Q96QB1	1528 aa		10.28	□□□□□ -0.76
RPH3A-223	ENST00000552352	TULP4	Q9NRJ4	1543 aa		10.27	□□□□□ -0.77
RPH3A-223	ENST00000552352	DCAF8L1	A6NGE4	600 aa		10.27	□□□□□ -0.77
RPH3A-223	ENST00000552352	IGHD	P01880	384 aa		10.27	□□□□□ -0.77
RPH3A-223	ENST00000552352	CHGA	P10645	457 aa	Known RBP	10.27	□□□□□ -0.77
RPH3A-223	ENST00000552352		E9PSI1	815 aa		10.26	□□□□□ -0.77
RPH3A-223	ENST00000552352	PDE3A	Q14432	1141 aa		10.26	□□□□□ -0.77
RPH3A-223	ENST00000552352	ZMYM3	Q14202	1370 aa		10.26	□□□□□ -0.77
RPH3A-223	ENST00000552352	A2ML1	A8K2U0	1454 aa		10.26	□□□□□ -0.77
RPH3A-223	ENST00000552352	PTPRM	P28827	1452 aa		10.26	□□□□□ -0.77
RPH3A-223	ENST00000552352	BCAR3	O75815	825 aa		10.26	□□□□□ -0.77
RPH3A-223	ENST00000552352	ANTXR1	Q9H6X2	564 aa		10.26	□□□□□ -0.77
RPH3A-223	ENST00000552352	NSD2	O96028	1365 aa		10.25	□□□□□ -0.77
RPH3A-223	ENST00000552352	SEC24B	O95487	1268 aa		10.25	□□□□□ -0.77
RPH3A-223	ENST00000552352	SPINK5	Q9NQ38	1064 aa	Predicted RBP	10.25	□□□□□ -0.77
RPH3A-223	ENST00000552352	RRAGD	Q9NQL2	400 aa	Predicted RBP	10.25	□□□□□ -0.77
RPH3A-223	ENST00000552352	ALK	Q9UM73	1620 aa		10.25	□□□□□ -0.77
RPH3A-223	ENST00000552352	NGEF	Q8N5V2	710 aa		10.25	□□□□□ -0.77
RPH3A-223	ENST00000552352	CLUAP1	Q96AJ1	413 aa		10.25	□□□□□ -0.77
RPH3A-223	ENST00000552352	SETD1A	O15047	1707 aa	Known RBP	10.25	□□□□□ -0.77
RPH3A-223	ENST00000552352	EVC2	Q86UK5	1308 aa		10.24	□□□□□ -0.77
RPH3A-223	ENST00000552352	SLK	Q9H2G2	1235 aa	Predicted RBP	10.24	□□□□□ -0.77
RPH3A-223	ENST00000552352	ANKRD36B	Q8N2N9	1353 aa		10.23	□□□□□ -0.77
RPH3A-223	ENST00000552352	CCDC146	Q8IYE0	955 aa		10.23	□□□□□ -0.77
RPH3A-223	ENST00000552352	YTHDC2	Q9H6S0	1430 aa	Known RBP	10.23	□□□□□ -0.77
RPH3A-223	ENST00000552352	POLR3A	O14802	1390 aa	Predicted RBP	10.23	□□□□□ -0.77
RPH3A-223	ENST00000552352	APAF1	O14727	1248 aa		10.23	□□□□□ -0.77
RPH3A-223	ENST00000552352	UPF2	Q9HAU5	1272 aa	Known RBP	10.23	□□□□□ -0.77
RPH3A-223	ENST00000552352	AAMP	Q13685	434 aa		10.22	□□□□□ -0.77
RPH3A-223	ENST00000552352	TBC1D32	Q96NH3	1257 aa		10.22	□□□□□ -0.77
RPH3A-223	ENST00000552352	CARD14	Q9BXL6	1004 aa		10.22	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms