RNA–Protein interactions for RNA: ENST00000552351.5

CHPT1-210, Transcript of choline phosphotransferase 1, humanhuman

TSL 2

Gene CHPT1, Length 1,524 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-210ENST00000552351 CDC42BPGQ6DT37 1551 aa38.56■■■■□ 3.76
CHPT1-210ENST00000552351 PIP4K2BP78356 416 aa38.56■■■■□ 3.76
CHPT1-210ENST00000552351 NBPF8Q3BBV2 869 aa38.56■■■■□ 3.76
CHPT1-210ENST00000552351 PRAM1Q96QH2 718 aa38.56■■■■□ 3.76
CHPT1-210ENST00000552351 SLAIN2Q9P270 581 aa38.55■■■■□ 3.76
CHPT1-210ENST00000552351 ROCK2O75116 1388 aaKnown RBP38.53■■■■□ 3.76
CHPT1-210ENST00000552351 POGKQ9P215 609 aa38.53■■■■□ 3.76
CHPT1-210ENST00000552351 SCAF1Q9H7N4 1312 aaKnown RBP38.52■■■■□ 3.76
CHPT1-210ENST00000552351 RALGAPBQ86X10 1494 aa38.52■■■■□ 3.76
CHPT1-210ENST00000552351 GPRASP1Q5JY77 1395 aa38.51■■■■□ 3.75
CHPT1-210ENST00000552351 MST1RQ04912 1400 aa38.49■■■■□ 3.75
CHPT1-210ENST00000552351 ROBO1Q9Y6N7 1651 aa38.48■■■■□ 3.75
CHPT1-210ENST00000552351 ADGRB2O60241 1585 aa38.46■■■■□ 3.75
CHPT1-210ENST00000552351 SAFB2Q14151 953 aaKnown RBP eCLIP38.41■■■■□ 3.74
CHPT1-210ENST00000552351 FMN2Q9NZ56 1722 aa38.4■■■■□ 3.74
CHPT1-210ENST00000552351 EIF3AQ14152 1382 aaKnown RBP38.38■■■■□ 3.73
CHPT1-210ENST00000552351 C1orf167Q5SNV9 1468 aa38.38■■■■□ 3.73
CHPT1-210ENST00000552351 CARD11Q9BXL7 1154 aa38.35■■■■□ 3.73
CHPT1-210ENST00000552351 CENPJQ9HC77 1338 aaPredicted RBP38.34■■■■□ 3.73
CHPT1-210ENST00000552351 BRINP3Q76B58 766 aa38.32■■■■□ 3.72
CHPT1-210ENST00000552351 QRICH2Q9H0J4 1663 aa38.31■■■■□ 3.72
CHPT1-210ENST00000552351 MINK1Q8N4C8 1332 aaPredicted RBP38.31■■■■□ 3.72
CHPT1-210ENST00000552351 HSPA1LP34931 641 aa38.29■■■■□ 3.72
CHPT1-210ENST00000552351 AHDC1Q5TGY3 1603 aaPredicted RBP38.28■■■■□ 3.72
CHPT1-210ENST00000552351 HIRIP3Q9BW71 556 aaPredicted RBP38.27■■■■□ 3.72
CHPT1-210ENST00000552351 ANKARQ7Z5J8 1434 aa38.26■■■■□ 3.72
CHPT1-210ENST00000552351 WASLO00401 505 aaPredicted RBP38.25■■■■□ 3.71
CHPT1-210ENST00000552351 NHSL1Q5SYE7 1610 aa38.24■■■■□ 3.71
CHPT1-210ENST00000552351 PHLPP1O60346 1717 aa38.23■■■■□ 3.71
CHPT1-210ENST00000552351 TULP4Q9NRJ4 1543 aa38.23■■■■□ 3.71
CHPT1-210ENST00000552351 RGPD8O14715 1765 aaPredicted RBP38.2■■■■□ 3.71
CHPT1-210ENST00000552351 ORAI2Q96SN7 254 aa38.2■■■■□ 3.71
CHPT1-210ENST00000552351 USP32Q8NFA0 1604 aa38.2■■■■□ 3.71
CHPT1-210ENST00000552351 SBNO2Q9Y2G9 1366 aa38.2■■■■□ 3.71
CHPT1-210ENST00000552351 KIF1AQ12756 1690 aa38.19■■■■□ 3.7
CHPT1-210ENST00000552351 ESCO1Q5FWF5 840 aa38.18■■■■□ 3.7
CHPT1-210ENST00000552351 NUTM2FA1L443 756 aa38.17■■■■□ 3.7
CHPT1-210ENST00000552351 COL16A1Q07092 1604 aaPredicted RBP38.16■■■■□ 3.7
CHPT1-210ENST00000552351 ITSN1Q15811 1721 aa38.14■■■■□ 3.7
CHPT1-210ENST00000552351 CDK19Q9BWU1 502 aa38.13■■■■□ 3.69
CHPT1-210ENST00000552351 ATP7BP35670 1465 aa38.11■■■■□ 3.69
CHPT1-210ENST00000552351 NPHP3Q7Z494 1330 aa38.09■■■■□ 3.69
CHPT1-210ENST00000552351 EVC2Q86UK5 1308 aa38.09■■■■□ 3.69
CHPT1-210ENST00000552351 PRR36Q9H6K5 1346 aa38.09■■■■□ 3.69
CHPT1-210ENST00000552351 USP47Q96K76 1375 aa38.08■■■■□ 3.69
CHPT1-210ENST00000552351 SLC24A1O60721 1099 aa38.07■■■■□ 3.68
CHPT1-210ENST00000552351 PHF8Q9UPP1 1060 aa38.07■■■■□ 3.68
CHPT1-210ENST00000552351 TOPAZ1Q8N9V7 1692 aa38.05■■■■□ 3.68
CHPT1-210ENST00000552351 NUDT16Q96DE0 195 aaKnown RBP38.05■■■■□ 3.68
CHPT1-210ENST00000552351 SOS2Q07890 1332 aaPredicted RBP38.04■■■■□ 3.68
CHPT1-210ENST00000552351 SRPK2P78362 688 aaKnown RBP38.03■■■■□ 3.68
CHPT1-210ENST00000552351 ST20-MTHFSA0A0A6YYL1 179 aa38.02■■■■□ 3.68
CHPT1-210ENST00000552351 CCDC61Q9Y6R9 512 aa38.02■■■■□ 3.68
CHPT1-210ENST00000552351 FOXO3O43524 673 aa38.01■■■■□ 3.67
CHPT1-210ENST00000552351 JCADQ9P266 1359 aa38■■■■□ 3.67
CHPT1-210ENST00000552351 PXDNQ92626 1479 aa38■■■■□ 3.67
CHPT1-210ENST00000552351 DDX17Q92841 729 aaKnown RBP38■■■■□ 3.67
CHPT1-210ENST00000552351 LRRC59Q96AG4 307 aaKnown RBP38■■■■□ 3.67
CHPT1-210ENST00000552351 SHPRHQ149N8 1683 aa37.98■■■■□ 3.67
CHPT1-210ENST00000552351 TESK2Q96S53 571 aa37.97■■■■□ 3.67
CHPT1-210ENST00000552351 CABP2Q9NPB3 220 aa37.97■■■■□ 3.67
CHPT1-210ENST00000552351 PMFBP1Q8TBY8 1022 aa37.93■■■■□ 3.66
CHPT1-210ENST00000552351 ATAD2Q6PL18 1390 aa37.92■■■■□ 3.66
CHPT1-210ENST00000552351 PLEKHG3A1L390 1219 aa37.92■■■■□ 3.66
CHPT1-210ENST00000552351 PUS7Q96PZ0 661 aaKnown RBP37.92■■■■□ 3.66
CHPT1-210ENST00000552351 PPIP5K1Q6PFW1 1433 aa37.9■■■■□ 3.66
CHPT1-210ENST00000552351 PSME1Q06323 249 aa37.89■■■■□ 3.66
CHPT1-210ENST00000552351 POLR3AO14802 1390 aaPredicted RBP37.89■■■■□ 3.66
CHPT1-210ENST00000552351 KRT28Q7Z3Y7 464 aa37.88■■■■□ 3.65
CHPT1-210ENST00000552351 NGDNQ8NEJ9 315 aaKnown RBP37.88■■■■□ 3.65
CHPT1-210ENST00000552351 SPATA31A6Q5VVP1 1343 aa37.86■■■■□ 3.65
CHPT1-210ENST00000552351 EIF4G2P78344 907 aaKnown RBP eCLIP37.86■■■■□ 3.65
CHPT1-210ENST00000552351 SBNO1A3KN83 1393 aa37.85■■■■□ 3.65
CHPT1-210ENST00000552351 XPCQ01831 940 aaPredicted RBP37.84■■■■□ 3.65
CHPT1-210ENST00000552351 PNPLA6Q8IY17 1366 aa37.83■■■■□ 3.65
CHPT1-210ENST00000552351 TMF1P82094 1093 aa37.82■■■■□ 3.65
CHPT1-210ENST00000552351 ACEP12821 1306 aa37.82■■■■□ 3.64
CHPT1-210ENST00000552351 TRPM3Q9HCF6 1732 aaPredicted RBP37.82■■■■□ 3.64
CHPT1-210ENST00000552351 COL22A1Q8NFW1 1626 aaPredicted RBP37.82■■■■□ 3.64
CHPT1-210ENST00000552351 SPATA31A3Q5VYP0 1347 aa37.8■■■■□ 3.64
CHPT1-210ENST00000552351 TNS3Q68CZ2 1445 aa37.8■■■■□ 3.64
CHPT1-210ENST00000552351 CABP1Q9NZU7 370 aa37.8■■■■□ 3.64
CHPT1-210ENST00000552351 MED1Q15648 1581 aaPredicted RBP37.78■■■■□ 3.64
CHPT1-210ENST00000552351 CDCA8Q53HL2 280 aa37.77■■■■□ 3.64
CHPT1-210ENST00000552351 BRD4O60885 1362 aaPredicted RBP37.76■■■■□ 3.63
CHPT1-210ENST00000552351 DISP3Q9P2K9 1392 aa37.76■■■■□ 3.63
CHPT1-210ENST00000552351 ARHGEF10O15013 1369 aa37.74■■■■□ 3.63
CHPT1-210ENST00000552351 NINLQ9Y2I6 1382 aa37.74■■■■□ 3.63
CHPT1-210ENST00000552351 ALS2Q96Q42 1657 aa37.73■■■■□ 3.63
CHPT1-210ENST00000552351 HSPA5P11021 654 aaKnown RBP37.73■■■■□ 3.63
CHPT1-210ENST00000552351 AKAP12Q02952 1782 aa37.72■■■■□ 3.63
CHPT1-210ENST00000552351 ZNF692Q9BU19 519 aaPredicted RBP37.71■■■■□ 3.63
CHPT1-210ENST00000552351 USP6P35125 1406 aa37.68■■■■□ 3.62
CHPT1-210ENST00000552351 CPSF1Q10570 1443 aaKnown RBP37.68■■■■□ 3.62
CHPT1-210ENST00000552351 LRP6O75581 1613 aa37.66■■■■□ 3.62
CHPT1-210ENST00000552351 TMC1Q8TDI8 760 aa37.64■■■■□ 3.62
CHPT1-210ENST00000552351 MON2Q7Z3U7 1717 aa37.63■■■■□ 3.62
CHPT1-210ENST00000552351 PAK3O75914 559 aaPredicted RBP37.63■■■■□ 3.61
CHPT1-210ENST00000552351 LMOD2Q6P5Q4 547 aa37.61■■■■□ 3.61
CHPT1-210ENST00000552351 SSH2Q76I76 1423 aa37.61■■■■□ 3.61
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms