RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 LCE2AQ5TA79 106 aaPredicted RBP10.36□□□□□ -0.75
USP44-207ENST00000552237 RNF19BQ6ZMZ0 732 aa10.36□□□□□ -0.75
USP44-207ENST00000552237 SNIP1Q8TAD8 396 aaKnown RBP10.35□□□□□ -0.75
USP44-207ENST00000552237 WNT7AO00755 349 aa10.34□□□□□ -0.75
USP44-207ENST00000552237 GPR37O15354 613 aa10.34□□□□□ -0.75
USP44-207ENST00000552237 TRIM32Q13049 653 aa10.34□□□□□ -0.75
USP44-207ENST00000552237 GPIHBP1Q8IV16 184 aa10.32□□□□□ -0.76
USP44-207ENST00000552237 PHOX2BQ99453 314 aa10.32□□□□□ -0.76
USP44-207ENST00000552237 MRGPRX2Q96LB1 330 aa10.31□□□□□ -0.76
USP44-207ENST00000552237 REPIN1Q9BWE0 567 aaKnown RBP10.31□□□□□ -0.76
USP44-207ENST00000552237 SMPD1P17405 629 aa10.3□□□□□ -0.76
USP44-207ENST00000552237 INSM1Q01101 510 aaPredicted RBP10.3□□□□□ -0.76
USP44-207ENST00000552237 ATP13A2Q9NQ11 1180 aa10.3□□□□□ -0.76
USP44-207ENST00000552237 CCDC24Q8N4L8 307 aa10.29□□□□□ -0.76
USP44-207ENST00000552237 SENP2Q9HC62 589 aa10.29□□□□□ -0.76
USP44-207ENST00000552237 MMP16P51512 607 aa10.28□□□□□ -0.76
USP44-207ENST00000552237 NFX1Q12986 1120 aaKnown RBP10.28□□□□□ -0.76
USP44-207ENST00000552237 STK17AQ9UEE5 414 aa10.28□□□□□ -0.76
USP44-207ENST00000552237 J3QL48 77 aa10.27□□□□□ -0.77
USP44-207ENST00000552237 USB1Q9BQ65 265 aaKnown RBP10.27□□□□□ -0.77
USP44-207ENST00000552237 KDM4AO75164 1064 aa10.25□□□□□ -0.77
USP44-207ENST00000552237 SNRPBP14678 240 aaKnown RBP10.25□□□□□ -0.77
USP44-207ENST00000552237 TRIM47Q96LD4 638 aa10.25□□□□□ -0.77
USP44-207ENST00000552237 WIPF1O43516 503 aa10.24□□□□□ -0.77
USP44-207ENST00000552237 CD46P15529 392 aa10.24□□□□□ -0.77
USP44-207ENST00000552237 KIFC2Q96AC6 838 aa10.24□□□□□ -0.77
USP44-207ENST00000552237 TERTO14746 1132 aaKnown RBP10.23□□□□□ -0.77
USP44-207ENST00000552237 DXOO77932 396 aaKnown RBP10.23□□□□□ -0.77
USP44-207ENST00000552237 HPS1Q92902 700 aa10.23□□□□□ -0.77
USP44-207ENST00000552237 USP46P62068 366 aa10.21□□□□□ -0.77
USP44-207ENST00000552237 RC3H1Q5TC82 1133 aaKnown RBP10.21□□□□□ -0.77
USP44-207ENST00000552237 WNT7BP56706 349 aa10.2□□□□□ -0.78
USP44-207ENST00000552237 ALDH1A1P00352 501 aa10.19□□□□□ -0.78
USP44-207ENST00000552237 MAP2K5Q13163 448 aa10.19□□□□□ -0.78
USP44-207ENST00000552237 MDM2Q00987 491 aaPredicted RBP10.18□□□□□ -0.78
USP44-207ENST00000552237 HLA-CQ95604 372 aa10.18□□□□□ -0.78
USP44-207ENST00000552237 SLC16A10Q8TF71 515 aa10.17□□□□□ -0.78
USP44-207ENST00000552237 TULP1O00294 542 aaPredicted RBP10.16□□□□□ -0.78
USP44-207ENST00000552237 HOXA2O43364 376 aa10.16□□□□□ -0.78
USP44-207ENST00000552237 SKOR1P84550 965 aa10.16□□□□□ -0.78
USP44-207ENST00000552237 JUNDP17535 347 aa10.15□□□□□ -0.78
USP44-207ENST00000552237 EHBP1Q8NDI1 1231 aa10.15□□□□□ -0.78
USP44-207ENST00000552237 PLCB2Q00722 1185 aa10.14□□□□□ -0.79
USP44-207ENST00000552237 WASF2Q9Y6W5 498 aa10.14□□□□□ -0.79
USP44-207ENST00000552237 FAM181BA6NEQ2 426 aa10.13□□□□□ -0.79
USP44-207ENST00000552237 GUCA2AQ02747 115 aa10.13□□□□□ -0.79
USP44-207ENST00000552237 IRF6O14896 467 aa10.12□□□□□ -0.79
USP44-207ENST00000552237 NUTM1Q86Y26 1132 aa10.12□□□□□ -0.79
USP44-207ENST00000552237 NUDT12Q9BQG2 462 aa10.12□□□□□ -0.79
USP44-207ENST00000552237 LCE2CQ5TA81 110 aa10.11□□□□□ -0.79
USP44-207ENST00000552237 KRI1Q8N9T8 703 aaKnown RBP10.11□□□□□ -0.79
USP44-207ENST00000552237 SYMPKQ92797 1274 aaKnown RBP10.1□□□□□ -0.79
USP44-207ENST00000552237 NXF1Q9UBU9 619 aaKnown RBP10.1□□□□□ -0.79
USP44-207ENST00000552237 CAPN5O15484 640 aaPredicted RBP10.09□□□□□ -0.79
USP44-207ENST00000552237 BMP1P13497 986 aa10.09□□□□□ -0.79
USP44-207ENST00000552237 RETREG3Q86VR2 466 aa10.09□□□□□ -0.79
USP44-207ENST00000552237 GPCPD1Q9NPB8 672 aa10.09□□□□□ -0.79
USP44-207ENST00000552237 MINK1Q8N4C8 1332 aaPredicted RBP10.08□□□□□ -0.8
USP44-207ENST00000552237 CLCN1P35523 988 aa10.08□□□□□ -0.8
USP44-207ENST00000552237 C6orf229H3BNL8 230 aa10.07□□□□□ -0.8
USP44-207ENST00000552237 IRF7Q92985 503 aa10.07□□□□□ -0.8
USP44-207ENST00000552237 CCDC102AQ96A19 550 aa10.06□□□□□ -0.8
USP44-207ENST00000552237 MS4A1P11836 297 aa10.05□□□□□ -0.8
USP44-207ENST00000552237 HAP1P54257 671 aaPredicted RBP10.05□□□□□ -0.8
USP44-207ENST00000552237 PTCRAQ6ISU1 281 aaPredicted RBP10.05□□□□□ -0.8
USP44-207ENST00000552237 CCNYL3P0C7X3 344 aa10.04□□□□□ -0.8
USP44-207ENST00000552237 FDX1P10109 184 aa10.04□□□□□ -0.8
USP44-207ENST00000552237 TRIM46Q7Z4K8 759 aa10.04□□□□□ -0.8
USP44-207ENST00000552237 FAM217BQ9NTX9 383 aaPredicted RBP10.04□□□□□ -0.8
USP44-207ENST00000552237 SIAH2O43255 324 aa10.03□□□□□ -0.8
USP44-207ENST00000552237 GMPRP36959 345 aa10.03□□□□□ -0.8
USP44-207ENST00000552237 VEGFBP49765 207 aa10.03□□□□□ -0.8
USP44-207ENST00000552237 NPAS3Q8IXF0 933 aa10.03□□□□□ -0.8
USP44-207ENST00000552237 SH3BP2P78314 561 aa10.02□□□□□ -0.81
USP44-207ENST00000552237 ZSCAN1Q8NBB4 408 aa10.02□□□□□ -0.81
USP44-207ENST00000552237 LINC01559Q495D7 138 aa10□□□□□ -0.81
USP44-207ENST00000552237 UNC93B1Q9H1C4 597 aa10□□□□□ -0.81
USP44-207ENST00000552237 TLL2Q9Y6L7 1015 aa10□□□□□ -0.81
USP44-207ENST00000552237 PLEKHG3A1L390 1219 aa9.99□□□□□ -0.81
USP44-207ENST00000552237 PTPRNQ16849 979 aa9.99□□□□□ -0.81
USP44-207ENST00000552237 H3BM21 787 aa9.98□□□□□ -0.81
USP44-207ENST00000552237 ZFP42Q96MM3 310 aa9.98□□□□□ -0.81
USP44-207ENST00000552237 PCDHGC3Q9UN70 934 aa9.98□□□□□ -0.81
USP44-207ENST00000552237 BAP1Q92560 729 aa9.97□□□□□ -0.81
USP44-207ENST00000552237 NNTQ13423 1086 aa9.96□□□□□ -0.82
USP44-207ENST00000552237 SCARF1Q14162 830 aa9.96□□□□□ -0.82
USP44-207ENST00000552237 VARSP26640 1264 aaKnown RBP9.95□□□□□ -0.82
USP44-207ENST00000552237 ZNF511Q8NB15 262 aa9.95□□□□□ -0.82
USP44-207ENST00000552237 EVA1BQ9NVM1 165 aa9.95□□□□□ -0.82
USP44-207ENST00000552237 KCNH2Q12809 1159 aa9.94□□□□□ -0.82
USP44-207ENST00000552237 PRR7Q8TB68 274 aa9.94□□□□□ -0.82
USP44-207ENST00000552237 MRPL14Q6P1L8 145 aaKnown RBP9.93□□□□□ -0.82
USP44-207ENST00000552237 ERBB4Q15303 1308 aa9.92□□□□□ -0.82
USP44-207ENST00000552237 NDUFV2P19404 249 aa9.92□□□□□ -0.82
USP44-207ENST00000552237 SSTR3P32745 418 aaPredicted RBP9.92□□□□□ -0.82
USP44-207ENST00000552237 WDR4P57081 412 aaKnown RBP9.92□□□□□ -0.82
USP44-207ENST00000552237 MTMR2Q13614 643 aa9.92□□□□□ -0.82
USP44-207ENST00000552237 TTLL12Q14166 644 aaPredicted RBP9.92□□□□□ -0.82
USP44-207ENST00000552237 SPIRE2Q8WWL2 714 aa9.92□□□□□ -0.82
USP44-207ENST00000552237 PURBQ96QR8 312 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms