RNA–Protein interactions for RNA: ENST00000552022.5

CACNB3-221, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 564 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-221ENST00000552022 LRP5O75197 1615 aa19.71■□□□□ 0.75
CACNB3-221ENST00000552022 NEXMIFQ5QGS0 1516 aa19.69■□□□□ 0.74
CACNB3-221ENST00000552022 ROBO2Q9HCK4 1378 aa19.69■□□□□ 0.74
CACNB3-221ENST00000552022 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.68■□□□□ 0.74
CACNB3-221ENST00000552022 GLI3P10071 1580 aa19.67■□□□□ 0.74
CACNB3-221ENST00000552022 PXDNQ92626 1479 aa19.66■□□□□ 0.74
CACNB3-221ENST00000552022 ROCK1Q13464 1354 aa19.65■□□□□ 0.74
CACNB3-221ENST00000552022 RALGAPBQ86X10 1494 aa19.65■□□□□ 0.74
CACNB3-221ENST00000552022 NPHP3Q7Z494 1330 aa19.63■□□□□ 0.73
CACNB3-221ENST00000552022 UNC5CLQ8IV45 518 aa19.63■□□□□ 0.73
CACNB3-221ENST00000552022 CLTCL1P53675 1640 aa19.62■□□□□ 0.73
CACNB3-221ENST00000552022 XPCQ01831 940 aaPredicted RBP19.62■□□□□ 0.73
CACNB3-221ENST00000552022 ESCO1Q5FWF5 840 aa19.62■□□□□ 0.73
CACNB3-221ENST00000552022 SLIT2O94813 1529 aa19.61■□□□□ 0.73
CACNB3-221ENST00000552022 KIF1BO60333 1816 aa19.61■□□□□ 0.73
CACNB3-221ENST00000552022 FOXO3O43524 673 aa19.6■□□□□ 0.73
CACNB3-221ENST00000552022 SF3B2Q13435 895 aaKnown RBP19.6■□□□□ 0.73
CACNB3-221ENST00000552022 PRAG1Q86YV5 1406 aa19.59■□□□□ 0.73
CACNB3-221ENST00000552022 PSDA5PKW4 1024 aaPredicted RBP19.58■□□□□ 0.72
CACNB3-221ENST00000552022 SEPT12Q8IYM1 358 aa19.58■□□□□ 0.72
CACNB3-221ENST00000552022 HFM1A2PYH4 1435 aa19.58■□□□□ 0.72
CACNB3-221ENST00000552022 HRCP23327 699 aa19.57■□□□□ 0.72
CACNB3-221ENST00000552022 CDC42BPGQ6DT37 1551 aa19.56■□□□□ 0.72
CACNB3-221ENST00000552022 VGFO15240 615 aaPredicted RBP19.55■□□□□ 0.72
CACNB3-221ENST00000552022 ONECUT3O60422 494 aaPredicted RBP19.54■□□□□ 0.72
CACNB3-221ENST00000552022 USP32Q8NFA0 1604 aa19.53■□□□□ 0.72
CACNB3-221ENST00000552022 KRT27Q7Z3Y8 459 aa19.52■□□□□ 0.72
CACNB3-221ENST00000552022 LRPPRCP42704 1394 aaKnown RBP19.52■□□□□ 0.72
CACNB3-221ENST00000552022 SPATA31A3Q5VYP0 1347 aa19.51■□□□□ 0.71
CACNB3-221ENST00000552022 NUTM2FA1L443 756 aa19.51■□□□□ 0.71
CACNB3-221ENST00000552022 VPS72Q15906 364 aa19.51■□□□□ 0.71
CACNB3-221ENST00000552022 ITGAEP38570 1179 aa19.49■□□□□ 0.71
CACNB3-221ENST00000552022 NAIPQ13075 1403 aa19.49■□□□□ 0.71
CACNB3-221ENST00000552022 PLCH1Q4KWH8 1693 aa19.49■□□□□ 0.71
CACNB3-221ENST00000552022 NWD2Q9ULI1 1742 aa19.48■□□□□ 0.71
CACNB3-221ENST00000552022 PPLO60437 1756 aa19.48■□□□□ 0.71
CACNB3-221ENST00000552022 BAG6P46379 1132 aa19.48■□□□□ 0.71
CACNB3-221ENST00000552022 WAPLQ7Z5K2 1190 aa19.46■□□□□ 0.71
CACNB3-221ENST00000552022 KRT28Q7Z3Y7 464 aa19.45■□□□□ 0.7
CACNB3-221ENST00000552022 CABLES1Q8TDN4 633 aa19.45■□□□□ 0.7
CACNB3-221ENST00000552022 CCDC9Q9Y3X0 531 aaKnown RBP19.45■□□□□ 0.7
CACNB3-221ENST00000552022 RPGRIP1LQ68CZ1 1315 aa19.45■□□□□ 0.7
CACNB3-221ENST00000552022 EN1Q05925 392 aaPredicted RBP19.44■□□□□ 0.7
CACNB3-221ENST00000552022 FMN2Q9NZ56 1722 aa19.44■□□□□ 0.7
CACNB3-221ENST00000552022 RGPD8O14715 1765 aaPredicted RBP19.44■□□□□ 0.7
CACNB3-221ENST00000552022 KIF1AQ12756 1690 aa19.43■□□□□ 0.7
CACNB3-221ENST00000552022 R3HDM1Q15032 1099 aaKnown RBP19.43■□□□□ 0.7
CACNB3-221ENST00000552022 CCDC144AA2RUR9 1427 aa19.42■□□□□ 0.7
CACNB3-221ENST00000552022 HAP1P54257 671 aaPredicted RBP19.42■□□□□ 0.7
CACNB3-221ENST00000552022 RGPD1P0DJD0 1748 aa19.42■□□□□ 0.7
CACNB3-221ENST00000552022 ABCA3Q99758 1704 aa19.42■□□□□ 0.7
CACNB3-221ENST00000552022 STK26Q9P289 416 aa19.41■□□□□ 0.7
CACNB3-221ENST00000552022 FAM83GA6ND36 823 aa19.4■□□□□ 0.7
CACNB3-221ENST00000552022 PLEKHG5O94827 1062 aa19.4■□□□□ 0.7
CACNB3-221ENST00000552022 PLEKHH1Q9ULM0 1364 aa19.4■□□□□ 0.7
CACNB3-221ENST00000552022 TECPR2O15040 1411 aa19.4■□□□□ 0.7
CACNB3-221ENST00000552022 TNS3Q68CZ2 1445 aa19.39■□□□□ 0.69
CACNB3-221ENST00000552022 A0A0G2JS52 829 aa19.38■□□□□ 0.69
CACNB3-221ENST00000552022 MYT1Q01538 1121 aa19.38■□□□□ 0.69
CACNB3-221ENST00000552022 FAM98CQ17RN3 349 aaKnown RBP19.38■□□□□ 0.69
CACNB3-221ENST00000552022 FAM182BQ5T319 152 aa19.38■□□□□ 0.69
CACNB3-221ENST00000552022 NRAPQ86VF7 1730 aa19.38■□□□□ 0.69
CACNB3-221ENST00000552022 ADGRF5Q8IZF2 1346 aa19.36■□□□□ 0.69
CACNB3-221ENST00000552022 TNS1Q9HBL0 1735 aaKnown RBP19.36■□□□□ 0.69
CACNB3-221ENST00000552022 KNDC1Q76NI1 1749 aa19.35■□□□□ 0.69
CACNB3-221ENST00000552022 YY1P25490 414 aa19.35■□□□□ 0.69
CACNB3-221ENST00000552022 PSME1Q06323 249 aa19.35■□□□□ 0.69
CACNB3-221ENST00000552022 DISP2A7MBM2 1401 aa19.34■□□□□ 0.69
CACNB3-221ENST00000552022 ABCC11Q96J66 1382 aa19.34■□□□□ 0.69
CACNB3-221ENST00000552022 EZH2Q15910 746 aaKnown RBP19.34■□□□□ 0.69
CACNB3-221ENST00000552022 PHF8Q9UPP1 1060 aa19.34■□□□□ 0.69
CACNB3-221ENST00000552022 IFT172Q9UG01 1749 aa19.34■□□□□ 0.69
CACNB3-221ENST00000552022 TMEM132EQ6IEE7 984 aa19.33■□□□□ 0.68
CACNB3-221ENST00000552022 LMOD2Q6P5Q4 547 aa19.33■□□□□ 0.68
CACNB3-221ENST00000552022 SBNO1A3KN83 1393 aa19.32■□□□□ 0.68
CACNB3-221ENST00000552022 BTG4Q9NY30 223 aa19.32■□□□□ 0.68
CACNB3-221ENST00000552022 CAMKK2Q96RR4 588 aa19.3■□□□□ 0.68
CACNB3-221ENST00000552022 ARHGEF10O15013 1369 aa19.3■□□□□ 0.68
CACNB3-221ENST00000552022 NRXN1Q9ULB1 1477 aa19.29■□□□□ 0.68
CACNB3-221ENST00000552022 RRBP1Q9P2E9 1410 aaKnown RBP19.29■□□□□ 0.68
CACNB3-221ENST00000552022 THSD7AQ9UPZ6 1657 aa19.29■□□□□ 0.68
CACNB3-221ENST00000552022 COL14A1Q05707 1796 aaKnown RBP19.28■□□□□ 0.68
CACNB3-221ENST00000552022 SPATA31A5Q5VU36 1347 aa19.27■□□□□ 0.68
CACNB3-221ENST00000552022 SPATA31A7Q8IWB4 1347 aa19.27■□□□□ 0.68
CACNB3-221ENST00000552022 YTHDC2Q9H6S0 1430 aaKnown RBP19.26■□□□□ 0.67
CACNB3-221ENST00000552022 TRIM37O94972 964 aa19.25■□□□□ 0.67
CACNB3-221ENST00000552022 SIRT1Q96EB6 747 aa19.25■□□□□ 0.67
CACNB3-221ENST00000552022 TRPM3Q9HCF6 1732 aaPredicted RBP19.25■□□□□ 0.67
CACNB3-221ENST00000552022 RGL3Q3MIN7 710 aa19.24■□□□□ 0.67
CACNB3-221ENST00000552022 SLC4A1APQ9BWU0 796 aaKnown RBP19.24■□□□□ 0.67
CACNB3-221ENST00000552022 PMFBP1Q8TBY8 1022 aa19.23■□□□□ 0.67
CACNB3-221ENST00000552022 RREB1Q92766 1687 aa19.23■□□□□ 0.67
CACNB3-221ENST00000552022 ADGRB2O60241 1585 aa19.23■□□□□ 0.67
CACNB3-221ENST00000552022 ALS2Q96Q42 1657 aa19.22■□□□□ 0.67
CACNB3-221ENST00000552022 PIK3C2GO75747 1445 aa19.22■□□□□ 0.67
CACNB3-221ENST00000552022 ANKRD30BQ9BXX2 1392 aa19.21■□□□□ 0.67
CACNB3-221ENST00000552022 APBA3O96018 575 aa19.21■□□□□ 0.67
CACNB3-221ENST00000552022 NUP188Q5SRE5 1749 aa19.21■□□□□ 0.67
CACNB3-221ENST00000552022 SPATA31E1Q6ZUB1 1445 aa19.21■□□□□ 0.67
CACNB3-221ENST00000552022 PPARGC1BQ86YN6 1023 aaKnown RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms