RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 MBD5Q9P267 1494 aa8.74□□□□□ -1.01
HOXB3-213ENST00000552000 SYNMO15061 1565 aa8.73□□□□□ -1.01
HOXB3-213ENST00000552000 SPOCK2Q92563 424 aa8.72□□□□□ -1.01
HOXB3-213ENST00000552000 XIRP1Q702N8 1843 aaKnown RBP8.72□□□□□ -1.01
HOXB3-213ENST00000552000 TIAM1Q13009 1591 aa8.72□□□□□ -1.01
HOXB3-213ENST00000552000 SETD1AO15047 1707 aaKnown RBP8.71□□□□□ -1.01
HOXB3-213ENST00000552000 ZC3H13Q5T200 1668 aaKnown RBP8.71□□□□□ -1.02
HOXB3-213ENST00000552000 CCDC141Q6ZP82 1450 aa8.7□□□□□ -1.02
HOXB3-213ENST00000552000 LTKP29376 864 aa8.69□□□□□ -1.02
HOXB3-213ENST00000552000 FAM135BQ49AJ0 1406 aa8.69□□□□□ -1.02
HOXB3-213ENST00000552000 ERVK-7P63135 1459 aa8.69□□□□□ -1.02
HOXB3-213ENST00000552000 SCAF11Q99590 1463 aaKnown RBP8.69□□□□□ -1.02
HOXB3-213ENST00000552000 TXNDC2Q86VQ3 553 aa8.68□□□□□ -1.02
HOXB3-213ENST00000552000 ZSWIM6Q9HCJ5 1215 aa8.68□□□□□ -1.02
HOXB3-213ENST00000552000 ABCC3O15438 1527 aa8.68□□□□□ -1.02
HOXB3-213ENST00000552000 UBR1Q8IWV7 1749 aa8.68□□□□□ -1.02
HOXB3-213ENST00000552000 PTGER2P43116 358 aa8.67□□□□□ -1.02
HOXB3-213ENST00000552000 CAMSAP2Q08AD1 1489 aa8.67□□□□□ -1.02
HOXB3-213ENST00000552000 NCOA2Q15596 1464 aa8.67□□□□□ -1.02
HOXB3-213ENST00000552000 ZNF687Q8N1G0 1237 aa8.67□□□□□ -1.02
HOXB3-213ENST00000552000 EHBP1L1Q8N3D4 1523 aa8.67□□□□□ -1.02
HOXB3-213ENST00000552000 EFCAB3Q8N7B9 438 aa8.67□□□□□ -1.02
HOXB3-213ENST00000552000 CEP162Q5TB80 1403 aa8.66□□□□□ -1.02
HOXB3-213ENST00000552000 TMEM94Q12767 1356 aa8.66□□□□□ -1.02
HOXB3-213ENST00000552000 RSPH4AQ5TD94 716 aa8.66□□□□□ -1.02
HOXB3-213ENST00000552000 ROBO1Q9Y6N7 1651 aa8.65□□□□□ -1.02
HOXB3-213ENST00000552000 TSPY4P0CV99 314 aa8.65□□□□□ -1.02
HOXB3-213ENST00000552000 TSPY10P0CW01 314 aa8.65□□□□□ -1.02
HOXB3-213ENST00000552000 RBM33Q96EV2 1170 aaKnown RBP8.65□□□□□ -1.02
HOXB3-213ENST00000552000 EID1Q9Y6B2 187 aa8.65□□□□□ -1.02
HOXB3-213ENST00000552000 CEP152O94986 1710 aa8.65□□□□□ -1.03
HOXB3-213ENST00000552000 ARHGAP23Q9P227 1491 aa8.64□□□□□ -1.03
HOXB3-213ENST00000552000 MICALL2Q8IY33 904 aa8.64□□□□□ -1.03
HOXB3-213ENST00000552000 SLIT1O75093 1534 aa8.64□□□□□ -1.03
HOXB3-213ENST00000552000 PROSER2Q86WR7 435 aaPredicted RBP8.63□□□□□ -1.03
HOXB3-213ENST00000552000 UPF1Q92900 1129 aaKnown RBP eCLIP8.63□□□□□ -1.032e-6■■■□□ 17.8
HOXB3-213ENST00000552000 ARHGEF5Q12774 1597 aa8.63□□□□□ -1.03
HOXB3-213ENST00000552000 KCNA6P17658 529 aa8.62□□□□□ -1.03
HOXB3-213ENST00000552000 TRIM52Q96A61 297 aa8.62□□□□□ -1.03
HOXB3-213ENST00000552000 PHLPP1O60346 1717 aa8.62□□□□□ -1.03
HOXB3-213ENST00000552000 MROH1Q8NDA8 1641 aa8.62□□□□□ -1.03
HOXB3-213ENST00000552000 JCADQ9P266 1359 aa8.61□□□□□ -1.03
HOXB3-213ENST00000552000 MAP3K1Q13233 1512 aa8.61□□□□□ -1.03
HOXB3-213ENST00000552000 IFNLR1Q8IU57 520 aaPredicted RBP8.61□□□□□ -1.03
HOXB3-213ENST00000552000 SLC26A8Q96RN1 970 aa8.61□□□□□ -1.03
HOXB3-213ENST00000552000 LRRC9Q6ZRR7 1453 aa8.61□□□□□ -1.03
HOXB3-213ENST00000552000 TMEM2Q9UHN6 1383 aa8.61□□□□□ -1.03
HOXB3-213ENST00000552000 MEX3CQ5U5Q3 659 aaKnown RBP8.6□□□□□ -1.03
HOXB3-213ENST00000552000 ANKRD13DQ6ZTN6 518 aa8.6□□□□□ -1.03
HOXB3-213ENST00000552000 PIK3C2BO00750 1634 aa8.6□□□□□ -1.03
HOXB3-213ENST00000552000 EIF2AK4Q9P2K8 1649 aaKnown RBP8.6□□□□□ -1.03
HOXB3-213ENST00000552000 MSH6P52701 1360 aa8.6□□□□□ -1.03
HOXB3-213ENST00000552000 GPR153Q6NV75 609 aa8.59□□□□□ -1.03
HOXB3-213ENST00000552000 TMEM92Q6UXU6 159 aa8.59□□□□□ -1.03
HOXB3-213ENST00000552000 SLAIN2Q9P270 581 aa8.59□□□□□ -1.03
HOXB3-213ENST00000552000 PRDM15P57071 1507 aaPredicted RBP8.59□□□□□ -1.03
HOXB3-213ENST00000552000 MAST1Q9Y2H9 1570 aa8.58□□□□□ -1.04
HOXB3-213ENST00000552000 ZNF772Q68DY9 489 aaPredicted RBP8.58□□□□□ -1.04
HOXB3-213ENST00000552000 BCANQ96GW7 911 aa8.58□□□□□ -1.04
HOXB3-213ENST00000552000 LRP6O75581 1613 aa8.58□□□□□ -1.04
HOXB3-213ENST00000552000 ARHGAP31Q2M1Z3 1444 aa8.57□□□□□ -1.04
HOXB3-213ENST00000552000 SOX12O15370 315 aa8.57□□□□□ -1.04
HOXB3-213ENST00000552000 EFCAB6Q5THR3 1501 aa8.57□□□□□ -1.04
HOXB3-213ENST00000552000 COL16A1Q07092 1604 aaPredicted RBP8.57□□□□□ -1.04
HOXB3-213ENST00000552000 NKTRP30414 1462 aaKnown RBP8.57□□□□□ -1.04
HOXB3-213ENST00000552000 TET3O43151 1660 aa8.56□□□□□ -1.04
HOXB3-213ENST00000552000 RXRBP28702 533 aa8.56□□□□□ -1.04
HOXB3-213ENST00000552000 IDI1Q13907 227 aa8.56□□□□□ -1.04
HOXB3-213ENST00000552000 ARSIQ5FYB1 569 aa8.56□□□□□ -1.04
HOXB3-213ENST00000552000 NWD1Q149M9 1564 aa8.56□□□□□ -1.04
HOXB3-213ENST00000552000 SPATA31A6Q5VVP1 1343 aa8.55□□□□□ -1.04
HOXB3-213ENST00000552000 DUOX2Q9NRD8 1548 aa8.55□□□□□ -1.04
HOXB3-213ENST00000552000 KIF15Q9NS87 1388 aa8.54□□□□□ -1.04
HOXB3-213ENST00000552000 ZNF316A6NFI3 1004 aaPredicted RBP8.54□□□□□ -1.04
HOXB3-213ENST00000552000 C14orf37Q86TY3 774 aa8.54□□□□□ -1.04
HOXB3-213ENST00000552000 CHD2O14647 1828 aaKnown RBP8.54□□□□□ -1.04
HOXB3-213ENST00000552000 FGD6Q6ZV73 1430 aa8.54□□□□□ -1.04
HOXB3-213ENST00000552000 KDM5AP29375 1690 aaKnown RBP8.53□□□□□ -1.04
HOXB3-213ENST00000552000 KANK1Q14678 1352 aa8.53□□□□□ -1.04
HOXB3-213ENST00000552000 NUTM2BA6NNL0 878 aaPredicted RBP8.53□□□□□ -1.04
HOXB3-213ENST00000552000 NUTM2EB1AL46 878 aaPredicted RBP8.53□□□□□ -1.04
HOXB3-213ENST00000552000 LSM11P83369 360 aaKnown RBP eCLIP8.53□□□□□ -1.04
HOXB3-213ENST00000552000 NUTM2AQ8IVF1 878 aaPredicted RBP8.53□□□□□ -1.04
HOXB3-213ENST00000552000 RRP7BPQ9NSQ0 103 aa8.53□□□□□ -1.04
HOXB3-213ENST00000552000 MYO5BQ9ULV0 1848 aa8.52□□□□□ -1.04
HOXB3-213ENST00000552000 MYOM3Q5VTT5 1437 aa8.52□□□□□ -1.05
HOXB3-213ENST00000552000 SHPRHQ149N8 1683 aa8.52□□□□□ -1.05
HOXB3-213ENST00000552000 AFF2P51816 1311 aa8.52□□□□□ -1.05
HOXB3-213ENST00000552000 EP400Q96L91 3159 aa8.51□□□□□ -1.05
HOXB3-213ENST00000552000 ADGRB3O60242 1522 aa8.51□□□□□ -1.05
HOXB3-213ENST00000552000 PPP1R15AO75807 674 aaPredicted RBP8.51□□□□□ -1.05
HOXB3-213ENST00000552000 PHF8Q9UPP1 1060 aa8.51□□□□□ -1.05
HOXB3-213ENST00000552000 ERBINQ96RT1 1412 aa8.51□□□□□ -1.05
HOXB3-213ENST00000552000 CDK12Q9NYV4 1490 aaPredicted RBP8.51□□□□□ -1.05
HOXB3-213ENST00000552000 AHDC1Q5TGY3 1603 aaPredicted RBP8.51□□□□□ -1.05
HOXB3-213ENST00000552000 RIOK3O14730 519 aaKnown RBP8.5□□□□□ -1.05
HOXB3-213ENST00000552000 SLC24A1O60721 1099 aa8.5□□□□□ -1.05
HOXB3-213ENST00000552000 ATF3P18847 181 aa8.5□□□□□ -1.05
HOXB3-213ENST00000552000 MS4A4AQ96JQ5 239 aa8.5□□□□□ -1.05
HOXB3-213ENST00000552000 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms