RNA–Protein interactions for RNA: ENST00000551752.5

RBFOX1-213, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best)

Gene RBFOX1, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-213ENST00000551752 MRPL50Q8N5N7 158 aaKnown RBP13.2□□□□□ -0.3
RBFOX1-213ENST00000551752 MYT1LQ9UL68 1186 aa13.2□□□□□ -0.3
RBFOX1-213ENST00000551752 CASKIN1Q8WXD9 1431 aa13.19□□□□□ -0.3
RBFOX1-213ENST00000551752 ARID3CA6NKF2 412 aa13.18□□□□□ -0.3
RBFOX1-213ENST00000551752 NBPF26B4DH59 902 aa13.17□□□□□ -0.3
RBFOX1-213ENST00000551752 GNPATO15228 680 aa13.17□□□□□ -0.3
RBFOX1-213ENST00000551752 PLSCR2Q9NRY7 297 aa13.17□□□□□ -0.3
RBFOX1-213ENST00000551752 FAM198AQ9UFP1 575 aa13.17□□□□□ -0.3
RBFOX1-213ENST00000551752 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.17□□□□□ -0.3
RBFOX1-213ENST00000551752 CCDC18Q5T9S5 1454 aa13.16□□□□□ -0.3
RBFOX1-213ENST00000551752 GOLGA8CPA6NN73 597 aa13.16□□□□□ -0.3
RBFOX1-213ENST00000551752 GPR37O15354 613 aa13.16□□□□□ -0.3
RBFOX1-213ENST00000551752 MMRN1Q13201 1228 aa13.16□□□□□ -0.3
RBFOX1-213ENST00000551752 TTC13Q8NBP0 860 aa13.16□□□□□ -0.3
RBFOX1-213ENST00000551752 CFAP74Q9C0B2 1584 aa13.15□□□□□ -0.3
RBFOX1-213ENST00000551752 PLCH2O75038 1416 aa13.15□□□□□ -0.3
RBFOX1-213ENST00000551752 TROQ12816 1431 aaPredicted RBP13.15□□□□□ -0.3
RBFOX1-213ENST00000551752 LAPTM4BQ86VI4 370 aa13.15□□□□□ -0.3
RBFOX1-213ENST00000551752 SEPT9Q9UHD8 586 aaPredicted RBP13.15□□□□□ -0.3
RBFOX1-213ENST00000551752 PNMA3Q9UL41 463 aa13.15□□□□□ -0.3
RBFOX1-213ENST00000551752 CLIP1P30622 1438 aa13.14□□□□□ -0.31
RBFOX1-213ENST00000551752 CDK13Q14004 1512 aaKnown RBP13.14□□□□□ -0.31
RBFOX1-213ENST00000551752 TATDN2Q93075 761 aa13.14□□□□□ -0.31
RBFOX1-213ENST00000551752 AKNAQ7Z591 1439 aa13.13□□□□□ -0.31
RBFOX1-213ENST00000551752 FYCO1Q9BQS8 1478 aa13.13□□□□□ -0.31
RBFOX1-213ENST00000551752 NUDT18Q6ZVK8 323 aa13.13□□□□□ -0.31
RBFOX1-213ENST00000551752 FANCAO15360 1455 aa13.12□□□□□ -0.31
RBFOX1-213ENST00000551752 SMAPO00193 183 aa13.12□□□□□ -0.31
RBFOX1-213ENST00000551752 RNF166Q96A37 237 aaPredicted RBP13.12□□□□□ -0.31
RBFOX1-213ENST00000551752 DENND4BO75064 1496 aaPredicted RBP13.11□□□□□ -0.31
RBFOX1-213ENST00000551752 MAGI2Q86UL8 1455 aa13.11□□□□□ -0.31
RBFOX1-213ENST00000551752 FAM98CQ17RN3 349 aaKnown RBP13.11□□□□□ -0.31
RBFOX1-213ENST00000551752 EFCAB2Q5VUJ9 269 aa13.11□□□□□ -0.31
RBFOX1-213ENST00000551752 FECHP22830 423 aa13.1□□□□□ -0.31
RBFOX1-213ENST00000551752 TTC37Q6PGP7 1564 aa13.09□□□□□ -0.31
RBFOX1-213ENST00000551752 ATP1B4Q9UN42 357 aaPredicted RBP13.09□□□□□ -0.31
RBFOX1-213ENST00000551752 C3orf80F5H4A9 247 aa13.08□□□□□ -0.32
RBFOX1-213ENST00000551752 RAPGEF3O95398 923 aa13.08□□□□□ -0.32
RBFOX1-213ENST00000551752 WNT2BQ93097 391 aa13.08□□□□□ -0.32
RBFOX1-213ENST00000551752 KCTD12Q96CX2 325 aaKnown RBP13.08□□□□□ -0.32
RBFOX1-213ENST00000551752 ZFRQ96KR1 1074 aaKnown RBP13.08□□□□□ -0.32
RBFOX1-213ENST00000551752 KIF14Q15058 1648 aa13.08□□□□□ -0.32
RBFOX1-213ENST00000551752 ADGRL1O94910 1474 aa13.08□□□□□ -0.32
RBFOX1-213ENST00000551752 RBM46Q8TBY0 533 aaKnown RBP13.07□□□□□ -0.32
RBFOX1-213ENST00000551752 ADGRG1Q9Y653 693 aa13.07□□□□□ -0.32
RBFOX1-213ENST00000551752 ZMYM4Q5VZL5 1548 aa13.07□□□□□ -0.32
RBFOX1-213ENST00000551752 RICTORQ6R327 1708 aa13.06□□□□□ -0.32
RBFOX1-213ENST00000551752 FAM161AQ3B820 660 aa13.06□□□□□ -0.32
RBFOX1-213ENST00000551752 ANKK1Q8NFD2 765 aa13.06□□□□□ -0.32
RBFOX1-213ENST00000551752 ZC3H15Q8WU90 426 aaKnown RBP13.06□□□□□ -0.32
RBFOX1-213ENST00000551752 PCF11O94913 1555 aaKnown RBP13.06□□□□□ -0.32
RBFOX1-213ENST00000551752 FRMPD1Q5SYB0 1578 aa13.06□□□□□ -0.32
RBFOX1-213ENST00000551752 LRRIQ1Q96JM4 1722 aa13.05□□□□□ -0.32
RBFOX1-213ENST00000551752 MYO5CQ9NQX4 1742 aa13.05□□□□□ -0.32
RBFOX1-213ENST00000551752 OATP04181 439 aa13.05□□□□□ -0.32
RBFOX1-213ENST00000551752 EYA1Q99502 592 aa13.04□□□□□ -0.32
RBFOX1-213ENST00000551752 SCAPERQ9BY12 1400 aa13.04□□□□□ -0.32
RBFOX1-213ENST00000551752 HDGFP51858 240 aaKnown RBP13.03□□□□□ -0.32
RBFOX1-213ENST00000551752 CEP162Q5TB80 1403 aa13.03□□□□□ -0.32
RBFOX1-213ENST00000551752 POGZQ7Z3K3 1410 aa13.03□□□□□ -0.32
RBFOX1-213ENST00000551752 MAP2K5Q13163 448 aa13.02□□□□□ -0.33
RBFOX1-213ENST00000551752 KRI1Q8N9T8 703 aaKnown RBP13.01□□□□□ -0.33
RBFOX1-213ENST00000551752 ZNF518AQ6AHZ1 1483 aa13.01□□□□□ -0.33
RBFOX1-213ENST00000551752 ARHGEF40Q8TER5 1519 aa13.01□□□□□ -0.33
RBFOX1-213ENST00000551752 MINK1Q8N4C8 1332 aaPredicted RBP13□□□□□ -0.33
RBFOX1-213ENST00000551752 ZMYND10O75800 440 aa13□□□□□ -0.33
RBFOX1-213ENST00000551752 LRCH3Q96II8 777 aa13□□□□□ -0.33
RBFOX1-213ENST00000551752 THSD4Q6ZMP0 1018 aa12.99□□□□□ -0.33
RBFOX1-213ENST00000551752 METTL3Q86U44 580 aaKnown RBP12.99□□□□□ -0.33
RBFOX1-213ENST00000551752 ARHGAP5Q13017 1502 aa12.98□□□□□ -0.33
RBFOX1-213ENST00000551752 DNAJB2P25686 324 aa12.98□□□□□ -0.33
RBFOX1-213ENST00000551752 BARGINQ6ZT62 677 aa12.98□□□□□ -0.33
RBFOX1-213ENST00000551752 SAMD7Q7Z3H4 446 aa12.98□□□□□ -0.33
RBFOX1-213ENST00000551752 PXYLP1Q8TE99 480 aa12.98□□□□□ -0.33
RBFOX1-213ENST00000551752 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.98□□□□□ -0.33
RBFOX1-213ENST00000551752 CDC42BPBQ9Y5S2 1711 aa12.98□□□□□ -0.33
RBFOX1-213ENST00000551752 ADAMTSL3P82987 1691 aa12.98□□□□□ -0.33
RBFOX1-213ENST00000551752 PREX2Q70Z35 1606 aa12.98□□□□□ -0.33
RBFOX1-213ENST00000551752 KDM5CP41229 1560 aa12.98□□□□□ -0.33
RBFOX1-213ENST00000551752 ZFYVE16Q7Z3T8 1539 aa12.98□□□□□ -0.33
RBFOX1-213ENST00000551752 MLH3Q9UHC1 1453 aa12.97□□□□□ -0.33
RBFOX1-213ENST00000551752 RCCD1A6NED2 376 aa12.97□□□□□ -0.33
RBFOX1-213ENST00000551752 SOWAHBA6NEL2 793 aa12.97□□□□□ -0.33
RBFOX1-213ENST00000551752 IRF6O14896 467 aa12.97□□□□□ -0.33
RBFOX1-213ENST00000551752 ATP10AO60312 1499 aa12.97□□□□□ -0.33
RBFOX1-213ENST00000551752 KIAA1107Q9UPP5 1409 aa12.96□□□□□ -0.33
RBFOX1-213ENST00000551752 BCAMP50895 628 aa12.96□□□□□ -0.33
RBFOX1-213ENST00000551752 PTPN5P54829 565 aa12.96□□□□□ -0.33
RBFOX1-213ENST00000551752 GPATCH8Q9UKJ3 1502 aaKnown RBP12.96□□□□□ -0.33
RBFOX1-213ENST00000551752 PLEKHH2Q8IVE3 1493 aa12.96□□□□□ -0.34
RBFOX1-213ENST00000551752 BCORL1Q5H9F3 1711 aa12.96□□□□□ -0.34
RBFOX1-213ENST00000551752 MTUS2Q5JR59 1369 aa12.95□□□□□ -0.34
RBFOX1-213ENST00000551752 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.95□□□□□ -0.34
RBFOX1-213ENST00000551752 HCSTQ9UBK5 93 aa12.95□□□□□ -0.34
RBFOX1-213ENST00000551752 REREQ9P2R6 1566 aa12.94□□□□□ -0.34
RBFOX1-213ENST00000551752 MAP3K1Q13233 1512 aa12.94□□□□□ -0.34
RBFOX1-213ENST00000551752 SLC4A3P48751 1232 aa12.94□□□□□ -0.34
RBFOX1-213ENST00000551752 SWT1Q5T5J6 900 aaKnown RBP12.94□□□□□ -0.34
RBFOX1-213ENST00000551752 CDC42BPAQ5VT25 1732 aa12.93□□□□□ -0.34
RBFOX1-213ENST00000551752 ABCC1P33527 1531 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms