RNA–Protein interactions for RNA: ENST00000551641.5

RAB3IP-215, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RAB3IP, Length 2,840 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-215ENST00000551641 METP08581 1390 aa10.79□□□□□ -0.68
RAB3IP-215ENST00000551641 PANK3Q9H999 370 aa10.79□□□□□ -0.68
RAB3IP-215ENST00000551641 CEP170BQ9Y4F5 1589 aaPredicted RBP10.79□□□□□ -0.68
RAB3IP-215ENST00000551641 RRP1P56182 461 aaKnown RBP10.79□□□□□ -0.68
RAB3IP-215ENST00000551641 PIK3C2GO75747 1445 aa10.79□□□□□ -0.68
RAB3IP-215ENST00000551641 PPLO60437 1756 aa10.79□□□□□ -0.68
RAB3IP-215ENST00000551641 UBR1Q8IWV7 1749 aa10.79□□□□□ -0.68
RAB3IP-215ENST00000551641 SETD1BQ9UPS6 1966 aaKnown RBP10.78□□□□□ -0.68
RAB3IP-215ENST00000551641 C14orf37Q86TY3 774 aa10.78□□□□□ -0.68
RAB3IP-215ENST00000551641 CCDC136Q96JN2 1154 aa10.78□□□□□ -0.68
RAB3IP-215ENST00000551641 SCAF11Q99590 1463 aaKnown RBP10.78□□□□□ -0.68
RAB3IP-215ENST00000551641 KIAA1210Q9ULL0 1709 aa10.77□□□□□ -0.69
RAB3IP-215ENST00000551641 ZFYVE9O95405 1425 aa10.77□□□□□ -0.69
RAB3IP-215ENST00000551641 AMOTL2Q9Y2J4 779 aa10.77□□□□□ -0.69
RAB3IP-215ENST00000551641 RCAN3Q9UKA8 241 aa10.76□□□□□ -0.69
RAB3IP-215ENST00000551641 MYOM2P54296 1465 aa10.76□□□□□ -0.69
RAB3IP-215ENST00000551641 CENPJQ9HC77 1338 aaPredicted RBP10.76□□□□□ -0.69
RAB3IP-215ENST00000551641 SRPK2P78362 688 aaKnown RBP10.76□□□□□ -0.69
RAB3IP-215ENST00000551641 CABP2Q9NPB3 220 aa10.76□□□□□ -0.69
RAB3IP-215ENST00000551641 PLEKHH1Q9ULM0 1364 aa10.75□□□□□ -0.69
RAB3IP-215ENST00000551641 CC2D1BQ5T0F9 858 aaKnown RBP10.75□□□□□ -0.69
RAB3IP-215ENST00000551641 NPC1L1Q9UHC9 1359 aa10.75□□□□□ -0.69
RAB3IP-215ENST00000551641 SENP3-EIF4A1A0A087X0R7 540 aa10.75□□□□□ -0.69
RAB3IP-215ENST00000551641 KCNA6P17658 529 aa10.75□□□□□ -0.69
RAB3IP-215ENST00000551641 PLEKHG5O94827 1062 aa10.74□□□□□ -0.69
RAB3IP-215ENST00000551641 IFT172Q9UG01 1749 aa10.74□□□□□ -0.69
RAB3IP-215ENST00000551641 CDCA8Q53HL2 280 aa10.74□□□□□ -0.69
RAB3IP-215ENST00000551641 ALKQ9UM73 1620 aa10.74□□□□□ -0.69
RAB3IP-215ENST00000551641 YTHDC2Q9H6S0 1430 aaKnown RBP10.73□□□□□ -0.69
RAB3IP-215ENST00000551641 MYOM1P52179 1685 aa10.73□□□□□ -0.69
RAB3IP-215ENST00000551641 AMER1Q5JTC6 1135 aaPredicted RBP10.73□□□□□ -0.69
RAB3IP-215ENST00000551641 PLEKHG1Q9ULL1 1385 aa10.73□□□□□ -0.69
RAB3IP-215ENST00000551641 ASXL1Q8IXJ9 1541 aa10.72□□□□□ -0.69
RAB3IP-215ENST00000551641 EIF3AQ14152 1382 aaKnown RBP10.72□□□□□ -0.69
RAB3IP-215ENST00000551641 ADAMTS13Q76LX8 1427 aa10.71□□□□□ -0.69
RAB3IP-215ENST00000551641 NRXN1Q9ULB1 1477 aa10.71□□□□□ -0.69
RAB3IP-215ENST00000551641 EXOC6Q8TAG9 804 aa10.71□□□□□ -0.69
RAB3IP-215ENST00000551641 CDCA7LQ96GN5 454 aa10.71□□□□□ -0.69
RAB3IP-215ENST00000551641 NPHP4O75161 1426 aaPredicted RBP10.71□□□□□ -0.7
RAB3IP-215ENST00000551641 PPP2R1AP30153 589 aa10.7□□□□□ -0.7
RAB3IP-215ENST00000551641 KNSTRNQ9Y448 316 aa10.7□□□□□ -0.7
RAB3IP-215ENST00000551641 TBX22Q9Y458 520 aa10.7□□□□□ -0.7
RAB3IP-215ENST00000551641 ROBO2Q9HCK4 1378 aa10.7□□□□□ -0.7
RAB3IP-215ENST00000551641 PROSER2Q86WR7 435 aaPredicted RBP10.7□□□□□ -0.7
RAB3IP-215ENST00000551641 SLC24A1O60721 1099 aa10.69□□□□□ -0.7
RAB3IP-215ENST00000551641 ERICH6Q7L0X2 663 aa10.69□□□□□ -0.7
RAB3IP-215ENST00000551641 CDK19Q9BWU1 502 aa10.69□□□□□ -0.7
RAB3IP-215ENST00000551641 SLC12A5Q9H2X9 1139 aa10.69□□□□□ -0.7
RAB3IP-215ENST00000551641 PTPRUQ92729 1446 aa10.69□□□□□ -0.7
RAB3IP-215ENST00000551641 ZNF521Q96K83 1311 aa10.69□□□□□ -0.7
RAB3IP-215ENST00000551641 KDM5AP29375 1690 aaKnown RBP10.69□□□□□ -0.7
RAB3IP-215ENST00000551641 ADAMTS8Q9UP79 889 aa10.69□□□□□ -0.7
RAB3IP-215ENST00000551641 SALL2Q9Y467 1007 aaPredicted RBP10.69□□□□□ -0.7
RAB3IP-215ENST00000551641 LMTK3Q96Q04 1460 aa10.69□□□□□ -0.7
RAB3IP-215ENST00000551641 ARHGAP23Q9P227 1491 aa10.69□□□□□ -0.7
RAB3IP-215ENST00000551641 ADGRB1O14514 1584 aa10.68□□□□□ -0.7
RAB3IP-215ENST00000551641 SLIT1O75093 1534 aa10.68□□□□□ -0.7
RAB3IP-215ENST00000551641 ZNF335Q9H4Z2 1342 aaPredicted RBP10.68□□□□□ -0.7
RAB3IP-215ENST00000551641 SBNO2Q9Y2G9 1366 aa10.67□□□□□ -0.7
RAB3IP-215ENST00000551641 NRXN3Q9Y4C0 1643 aa10.67□□□□□ -0.7
RAB3IP-215ENST00000551641 TCERG1O14776 1098 aaKnown RBP10.67□□□□□ -0.7
RAB3IP-215ENST00000551641 EVC2Q86UK5 1308 aa10.67□□□□□ -0.7
RAB3IP-215ENST00000551641 PMFBP1Q8TBY8 1022 aa10.66□□□□□ -0.7
RAB3IP-215ENST00000551641 NOP58Q9Y2X3 529 aaKnown RBP10.66□□□□□ -0.7
RAB3IP-215ENST00000551641 SETBP1Q9Y6X0 1596 aa10.66□□□□□ -0.7
RAB3IP-215ENST00000551641 TNNT2P45379 298 aaPredicted RBP10.66□□□□□ -0.7
RAB3IP-215ENST00000551641 MS4A1P11836 297 aa10.65□□□□□ -0.7
RAB3IP-215ENST00000551641 CABP1Q9NZU7 370 aa10.65□□□□□ -0.71
RAB3IP-215ENST00000551641 DUSP27Q5VZP5 1158 aa10.64□□□□□ -0.71
RAB3IP-215ENST00000551641 IPO9Q96P70 1041 aaKnown RBP10.64□□□□□ -0.71
RAB3IP-215ENST00000551641 ZNF142P52746 1687 aaPredicted RBP10.64□□□□□ -0.71
RAB3IP-215ENST00000551641 ABCC11Q96J66 1382 aa10.64□□□□□ -0.71
RAB3IP-215ENST00000551641 ANP32AP39687 249 aaKnown RBP10.64□□□□□ -0.71
RAB3IP-215ENST00000551641 WDR43Q15061 677 aaKnown RBP eCLIP10.64□□□□□ -0.71
RAB3IP-215ENST00000551641 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.63□□□□□ -0.71
RAB3IP-215ENST00000551641 WASLO00401 505 aaPredicted RBP10.63□□□□□ -0.71
RAB3IP-215ENST00000551641 XPCQ01831 940 aaPredicted RBP10.63□□□□□ -0.71
RAB3IP-215ENST00000551641 TRMT2AQ8IZ69 625 aaKnown RBP10.63□□□□□ -0.71
RAB3IP-215ENST00000551641 SOX12O15370 315 aa10.62□□□□□ -0.71
RAB3IP-215ENST00000551641 NUDT16Q96DE0 195 aaKnown RBP10.62□□□□□ -0.71
RAB3IP-215ENST00000551641 CRBNQ96SW2 442 aa10.62□□□□□ -0.71
RAB3IP-215ENST00000551641 QRICH2Q9H0J4 1663 aa10.62□□□□□ -0.71
RAB3IP-215ENST00000551641 PLIN1O60240 522 aa10.62□□□□□ -0.71
RAB3IP-215ENST00000551641 PAK3O75914 559 aaPredicted RBP10.62□□□□□ -0.71
RAB3IP-215ENST00000551641 GOLGA2Q08379 1002 aa10.61□□□□□ -0.71
RAB3IP-215ENST00000551641 ARHGEF28Q8N1W1 1705 aaKnown RBP10.61□□□□□ -0.71
RAB3IP-215ENST00000551641 SLFN5Q08AF3 891 aa10.61□□□□□ -0.71
RAB3IP-215ENST00000551641 LMOD2Q6P5Q4 547 aa10.61□□□□□ -0.71
RAB3IP-215ENST00000551641 BACH2Q9BYV9 841 aa10.61□□□□□ -0.71
RAB3IP-215ENST00000551641 ESCO1Q5FWF5 840 aa10.6□□□□□ -0.71
RAB3IP-215ENST00000551641 NGEFQ8N5V2 710 aa10.6□□□□□ -0.71
RAB3IP-215ENST00000551641 CARD14Q9BXL6 1004 aa10.6□□□□□ -0.71
RAB3IP-215ENST00000551641 KDM2BQ8NHM5 1336 aa10.6□□□□□ -0.71
RAB3IP-215ENST00000551641 PDE4AP27815 886 aa10.6□□□□□ -0.71
RAB3IP-215ENST00000551641 NUTM2GQ5VZR2 741 aa10.6□□□□□ -0.71
RAB3IP-215ENST00000551641 DDX17Q92841 729 aaKnown RBP10.6□□□□□ -0.71
RAB3IP-215ENST00000551641 MED14O60244 1454 aa10.6□□□□□ -0.71
RAB3IP-215ENST00000551641 NGDNQ8NEJ9 315 aaKnown RBP10.59□□□□□ -0.71
RAB3IP-215ENST00000551641 TMEM94Q12767 1356 aa10.59□□□□□ -0.71
RAB3IP-215ENST00000551641 SETD1AO15047 1707 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms