RNA–Protein interactions for RNA: ENST00000551567.1

TROAP-216, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3

Gene TROAP, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-216ENST00000551567 ORAI2Q96SN7 254 aa34.13■■■■□ 3.05
TROAP-216ENST00000551567 MYOM2P54296 1465 aa34.09■■■■□ 3.05
TROAP-216ENST00000551567 PNPLA6Q8IY17 1366 aa34.09■■■■□ 3.05
TROAP-216ENST00000551567 WAPLQ7Z5K2 1190 aa34.08■■■■□ 3.05
TROAP-216ENST00000551567 NRXN1Q9ULB1 1477 aa34.07■■■■□ 3.05
TROAP-216ENST00000551567 YTHDC2Q9H6S0 1430 aaKnown RBP34.07■■■■□ 3.04
TROAP-216ENST00000551567 ABCC11Q96J66 1382 aa34.07■■■■□ 3.04
TROAP-216ENST00000551567 PLEKHH1Q9ULM0 1364 aa34.06■■■■□ 3.04
TROAP-216ENST00000551567 ZNF772Q68DY9 489 aaPredicted RBP34.03■■■■□ 3.04
TROAP-216ENST00000551567 C14orf93Q9H972 538 aaKnown RBP34.01■■■■□ 3.03
TROAP-216ENST00000551567 SOS2Q07890 1332 aaPredicted RBP34.01■■■■□ 3.03
TROAP-216ENST00000551567 ESCO1Q5FWF5 840 aa34■■■■□ 3.03
TROAP-216ENST00000551567 CFAP70Q5T0N1 1121 aa34■■■■□ 3.03
TROAP-216ENST00000551567 FMN2Q9NZ56 1722 aa34■■■■□ 3.03
TROAP-216ENST00000551567 NUTM2FA1L443 756 aa33.98■■■■□ 3.03
TROAP-216ENST00000551567 AFF2P51816 1311 aa33.97■■■■□ 3.03
TROAP-216ENST00000551567 DHX57Q6P158 1386 aaKnown RBP33.95■■■■□ 3.02
TROAP-216ENST00000551567 C8orf37Q96NL8 207 aa33.94■■■■□ 3.02
TROAP-216ENST00000551567 NPHP3Q7Z494 1330 aa33.93■■■■□ 3.02
TROAP-216ENST00000551567 PXDNQ92626 1479 aa33.92■■■■□ 3.02
TROAP-216ENST00000551567 COL22A1Q8NFW1 1626 aaPredicted RBP33.91■■■■□ 3.02
TROAP-216ENST00000551567 ADAMTS2O95450 1211 aa33.9■■■■□ 3.02
TROAP-216ENST00000551567 HRCP23327 699 aa33.9■■■■□ 3.02
TROAP-216ENST00000551567 XPCQ01831 940 aaPredicted RBP33.89■■■■□ 3.02
TROAP-216ENST00000551567 RGPD8O14715 1765 aaPredicted RBP33.88■■■■□ 3.01
TROAP-216ENST00000551567 KIF1AQ12756 1690 aa33.88■■■■□ 3.01
TROAP-216ENST00000551567 FOXO3O43524 673 aa33.88■■■■□ 3.01
TROAP-216ENST00000551567 SIRT1Q96EB6 747 aa33.88■■■■□ 3.01
TROAP-216ENST00000551567 ADGRB1O14514 1584 aa33.86■■■■□ 3.01
TROAP-216ENST00000551567 RXRBP28702 533 aa33.86■■■■□ 3.01
TROAP-216ENST00000551567 SAFB2Q14151 953 aaKnown RBP eCLIP33.86■■■■□ 3.01
TROAP-216ENST00000551567 KDM2AQ9Y2K7 1162 aa33.86■■■■□ 3.01
TROAP-216ENST00000551567 PRAM1Q96QH2 718 aa33.85■■■■□ 3.01
TROAP-216ENST00000551567 DLC1Q96QB1 1528 aa33.84■■■■□ 3.01
TROAP-216ENST00000551567 DCAF11Q8TEB1 546 aa33.84■■■■□ 3.01
TROAP-216ENST00000551567 NGLY1Q96IV0 654 aa33.82■■■■□ 3
TROAP-216ENST00000551567 POGKQ9P215 609 aa33.79■■■■□ 3
TROAP-216ENST00000551567 CDK12Q9NYV4 1490 aaPredicted RBP33.78■■■■□ 3
TROAP-216ENST00000551567 MARF1Q9Y4F3 1742 aaKnown RBP33.78■■■■□ 3
TROAP-216ENST00000551567 QTRT2Q9H974 415 aaKnown RBP33.77■■■■□ 3
TROAP-216ENST00000551567 ADGRB2O60241 1585 aa33.76■■■□□ 2.99
TROAP-216ENST00000551567 TRAK1Q9UPV9 953 aa33.75■■■□□ 2.99
TROAP-216ENST00000551567 USP32Q8NFA0 1604 aa33.74■■■□□ 2.99
TROAP-216ENST00000551567 PHF8Q9UPP1 1060 aa33.71■■■□□ 2.99
TROAP-216ENST00000551567 RGS12O14924 1447 aa33.7■■■□□ 2.99
TROAP-216ENST00000551567 RBM6P78332 1123 aaKnown RBP33.7■■■□□ 2.99
TROAP-216ENST00000551567 STAC3Q96MF2 364 aa33.7■■■□□ 2.99
TROAP-216ENST00000551567 USP21Q9UK80 565 aa33.7■■■□□ 2.99
TROAP-216ENST00000551567 KRT28Q7Z3Y7 464 aa33.69■■■□□ 2.98
TROAP-216ENST00000551567 HIRIP3Q9BW71 556 aaPredicted RBP33.69■■■□□ 2.98
TROAP-216ENST00000551567 SPATA31A3Q5VYP0 1347 aa33.69■■■□□ 2.98
TROAP-216ENST00000551567 ARHGEF28Q8N1W1 1705 aaKnown RBP33.67■■■□□ 2.98
TROAP-216ENST00000551567 ANKARQ7Z5J8 1434 aa33.66■■■□□ 2.98
TROAP-216ENST00000551567 MINK1Q8N4C8 1332 aaPredicted RBP33.66■■■□□ 2.98
TROAP-216ENST00000551567 FNBP4Q8N3X1 1017 aaPredicted RBP33.65■■■□□ 2.98
TROAP-216ENST00000551567 TNS3Q68CZ2 1445 aa33.64■■■□□ 2.98
TROAP-216ENST00000551567 UPF1Q92900 1129 aaKnown RBP eCLIP33.64■■■□□ 2.98
TROAP-216ENST00000551567 TRPC5Q9UL62 973 aaPredicted RBP33.61■■■□□ 2.97
TROAP-216ENST00000551567 ATRNO75882 1429 aa33.61■■■□□ 2.97
TROAP-216ENST00000551567 PSME1Q06323 249 aa33.6■■■□□ 2.97
TROAP-216ENST00000551567 PMFBP1Q8TBY8 1022 aa33.6■■■□□ 2.97
TROAP-216ENST00000551567 TULP4Q9NRJ4 1543 aa33.59■■■□□ 2.97
TROAP-216ENST00000551567 ABCA3Q99758 1704 aa33.59■■■□□ 2.97
TROAP-216ENST00000551567 BCL9LQ86UU0 1499 aa33.58■■■□□ 2.97
TROAP-216ENST00000551567 KIAA1210Q9ULL0 1709 aa33.58■■■□□ 2.97
TROAP-216ENST00000551567 EIF3AQ14152 1382 aaKnown RBP33.57■■■□□ 2.96
TROAP-216ENST00000551567 PLEKHG5O94827 1062 aa33.56■■■□□ 2.96
TROAP-216ENST00000551567 SBNO1A3KN83 1393 aa33.56■■■□□ 2.96
TROAP-216ENST00000551567 PRR36Q9H6K5 1346 aa33.55■■■□□ 2.96
TROAP-216ENST00000551567 LMOD2Q6P5Q4 547 aa33.55■■■□□ 2.96
TROAP-216ENST00000551567 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.55■■■□□ 2.96
TROAP-216ENST00000551567 TRPM3Q9HCF6 1732 aaPredicted RBP33.55■■■□□ 2.96
TROAP-216ENST00000551567 WASLO00401 505 aaPredicted RBP33.54■■■□□ 2.96
TROAP-216ENST00000551567 HAP1P54257 671 aaPredicted RBP33.53■■■□□ 2.96
TROAP-216ENST00000551567 CABLES1Q8TDN4 633 aa33.52■■■□□ 2.96
TROAP-216ENST00000551567 ITSN1Q15811 1721 aa33.51■■■□□ 2.96
TROAP-216ENST00000551567 ARHGEF10O15013 1369 aa33.51■■■□□ 2.96
TROAP-216ENST00000551567 SLIT2O94813 1529 aa33.49■■■□□ 2.95
TROAP-216ENST00000551567 PLCH1Q4KWH8 1693 aa33.48■■■□□ 2.95
TROAP-216ENST00000551567 ALS2Q96Q42 1657 aa33.48■■■□□ 2.95
TROAP-216ENST00000551567 GPRASP1Q5JY77 1395 aa33.47■■■□□ 2.95
TROAP-216ENST00000551567 ATP7BP35670 1465 aa33.46■■■□□ 2.95
TROAP-216ENST00000551567 UNC5CLQ8IV45 518 aa33.44■■■□□ 2.94
TROAP-216ENST00000551567 NBPF1Q3BBV0 1214 aa33.43■■■□□ 2.94
TROAP-216ENST00000551567 GJD4Q96KN9 370 aaPredicted RBP33.42■■■□□ 2.94
TROAP-216ENST00000551567 ATAD2Q6PL18 1390 aa33.42■■■□□ 2.94
TROAP-216ENST00000551567 GLI3P10071 1580 aa33.42■■■□□ 2.94
TROAP-216ENST00000551567 NWD2Q9ULI1 1742 aa33.42■■■□□ 2.94
TROAP-216ENST00000551567 NGDNQ8NEJ9 315 aaKnown RBP33.41■■■□□ 2.94
TROAP-216ENST00000551567 RALGAPBQ86X10 1494 aa33.4■■■□□ 2.94
TROAP-216ENST00000551567 TOPAZ1Q8N9V7 1692 aa33.39■■■□□ 2.94
TROAP-216ENST00000551567 NUDT16Q96DE0 195 aaKnown RBP33.39■■■□□ 2.94
TROAP-216ENST00000551567 CDK19Q9BWU1 502 aa33.37■■■□□ 2.93
TROAP-216ENST00000551567 CRYBG1Q9Y4K1 1723 aa33.36■■■□□ 2.93
TROAP-216ENST00000551567 PAK3O75914 559 aaPredicted RBP33.34■■■□□ 2.93
TROAP-216ENST00000551567 L3MBTL2Q969R5 705 aa33.34■■■□□ 2.93
TROAP-216ENST00000551567 SIN3AQ96ST3 1273 aa33.34■■■□□ 2.93
TROAP-216ENST00000551567 QRICH2Q9H0J4 1663 aa33.33■■■□□ 2.93
TROAP-216ENST00000551567 EP400Q96L91 3159 aa33.32■■■□□ 2.92
TROAP-216ENST00000551567 NRAPQ86VF7 1730 aa33.31■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms