RNA–Protein interactions for RNA: ENST00000551219.5

PTPRR-211, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best)

Gene PTPRR, Length 2,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-211ENST00000551219 AAMPQ13685 434 aa8.64□□□□□ -1.03
PTPRR-211ENST00000551219 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.64□□□□□ -1.03
PTPRR-211ENST00000551219 CGNL1Q0VF96 1302 aa8.64□□□□□ -1.03
PTPRR-211ENST00000551219 MAPK8IP3Q9UPT6 1336 aa8.64□□□□□ -1.03
PTPRR-211ENST00000551219 DEPDC5O75140 1603 aa8.64□□□□□ -1.03
PTPRR-211ENST00000551219 MKRN4PQ13434 485 aaPredicted RBP8.64□□□□□ -1.03
PTPRR-211ENST00000551219 RSPH6AQ9H0K4 717 aa8.64□□□□□ -1.03
PTPRR-211ENST00000551219 TET3O43151 1660 aa8.63□□□□□ -1.03
PTPRR-211ENST00000551219 MYOM2P54296 1465 aa8.63□□□□□ -1.03
PTPRR-211ENST00000551219 PDE3AQ14432 1141 aa8.63□□□□□ -1.03
PTPRR-211ENST00000551219 EFCAB2Q5VUJ9 269 aa8.63□□□□□ -1.03
PTPRR-211ENST00000551219 SPOCK2Q92563 424 aa8.63□□□□□ -1.03
PTPRR-211ENST00000551219 VIRMAQ69YN4 1812 aaKnown RBP8.63□□□□□ -1.03
PTPRR-211ENST00000551219 CLTCL1P53675 1640 aa8.63□□□□□ -1.03
PTPRR-211ENST00000551219 APBB1O00213 710 aa8.62□□□□□ -1.03
PTPRR-211ENST00000551219 SKAP1Q86WV1 359 aa8.62□□□□□ -1.03
PTPRR-211ENST00000551219 UHRF1BP1LA0JNW5 1464 aa8.61□□□□□ -1.03
PTPRR-211ENST00000551219 VWDEQ8N2E2 1590 aa8.61□□□□□ -1.03
PTPRR-211ENST00000551219 ZFYVE16Q7Z3T8 1539 aa8.61□□□□□ -1.03
PTPRR-211ENST00000551219 PDIA4P13667 645 aaKnown RBP8.61□□□□□ -1.03
PTPRR-211ENST00000551219 KANK1Q14678 1352 aa8.61□□□□□ -1.03
PTPRR-211ENST00000551219 POLR3AO14802 1390 aaPredicted RBP8.6□□□□□ -1.03
PTPRR-211ENST00000551219 SBNO2Q9Y2G9 1366 aa8.6□□□□□ -1.03
PTPRR-211ENST00000551219 MYO3AQ8NEV4 1616 aa8.6□□□□□ -1.03
PTPRR-211ENST00000551219 BECN1Q14457 450 aa8.6□□□□□ -1.03
PTPRR-211ENST00000551219 CHMP4AQ9BY43 222 aa8.6□□□□□ -1.03
PTPRR-211ENST00000551219 FRAT1Q92837 279 aaPredicted RBP8.6□□□□□ -1.03
PTPRR-211ENST00000551219 MAP3K4Q9Y6R4 1608 aa8.59□□□□□ -1.03
PTPRR-211ENST00000551219 ERVK-7P63135 1459 aa8.59□□□□□ -1.03
PTPRR-211ENST00000551219 TRAPPC8Q9Y2L5 1435 aa8.59□□□□□ -1.03
PTPRR-211ENST00000551219 APAF1O14727 1248 aa8.59□□□□□ -1.03
PTPRR-211ENST00000551219 RGS3P49796 1198 aa8.59□□□□□ -1.03
PTPRR-211ENST00000551219 SPAG9O60271 1321 aaKnown RBP8.59□□□□□ -1.03
PTPRR-211ENST00000551219 CENPJQ9HC77 1338 aaPredicted RBP8.59□□□□□ -1.03
PTPRR-211ENST00000551219 ZCCHC11Q5TAX3 1644 aaKnown RBP8.58□□□□□ -1.04
PTPRR-211ENST00000551219 SLC4A3P48751 1232 aa8.58□□□□□ -1.04
PTPRR-211ENST00000551219 CLUAP1Q96AJ1 413 aa8.58□□□□□ -1.04
PTPRR-211ENST00000551219 GPBP1L1Q9HC44 474 aaPredicted RBP8.58□□□□□ -1.04
PTPRR-211ENST00000551219 CHD1O14646 1710 aa8.58□□□□□ -1.04
PTPRR-211ENST00000551219 CCDC146Q8IYE0 955 aa8.58□□□□□ -1.04
PTPRR-211ENST00000551219 PMFBP1Q8TBY8 1022 aa8.58□□□□□ -1.04
PTPRR-211ENST00000551219 ABCA6Q8N139 1617 aa8.58□□□□□ -1.04
PTPRR-211ENST00000551219 NRXN1Q9ULB1 1477 aa8.57□□□□□ -1.04
PTPRR-211ENST00000551219 FOXD4L5Q5VV16 416 aaPredicted RBP8.57□□□□□ -1.04
PTPRR-211ENST00000551219 FOXD4L4Q8WXT5 416 aaPredicted RBP8.57□□□□□ -1.04
PTPRR-211ENST00000551219 INO80Q9ULG1 1556 aaPredicted RBP8.57□□□□□ -1.04
PTPRR-211ENST00000551219 SETBP1Q9Y6X0 1596 aa8.57□□□□□ -1.04
PTPRR-211ENST00000551219 BCAR3O75815 825 aa8.57□□□□□ -1.04
PTPRR-211ENST00000551219 KCTD17Q8N5Z5 321 aa8.57□□□□□ -1.04
PTPRR-211ENST00000551219 BRPF3Q9ULD4 1205 aa8.57□□□□□ -1.04
PTPRR-211ENST00000551219 CANXP27824 592 aaKnown RBP8.56□□□□□ -1.04
PTPRR-211ENST00000551219 ANO8Q9HCE9 1232 aaPredicted RBP8.56□□□□□ -1.04
PTPRR-211ENST00000551219 SPINK5Q9NQ38 1064 aaPredicted RBP8.56□□□□□ -1.04
PTPRR-211ENST00000551219 USP19O94966 1318 aa8.56□□□□□ -1.04
PTPRR-211ENST00000551219 IQSEC2Q5JU85 1478 aa8.56□□□□□ -1.04
PTPRR-211ENST00000551219 USP32Q8NFA0 1604 aa8.56□□□□□ -1.04
PTPRR-211ENST00000551219 FRAT2O75474 233 aaPredicted RBP8.56□□□□□ -1.04
PTPRR-211ENST00000551219 UPF2Q9HAU5 1272 aaKnown RBP8.56□□□□□ -1.04
PTPRR-211ENST00000551219 CIZ1Q9ULV3 898 aaPredicted RBP8.56□□□□□ -1.04
PTPRR-211ENST00000551219 ATP7AQ04656 1500 aa8.56□□□□□ -1.04
PTPRR-211ENST00000551219 IFT172Q9UG01 1749 aa8.56□□□□□ -1.04
PTPRR-211ENST00000551219 RAD21O60216 631 aa8.55□□□□□ -1.04
PTPRR-211ENST00000551219 IGHDP01880 384 aa8.55□□□□□ -1.04
PTPRR-211ENST00000551219 NLRP1Q9C000 1473 aa8.55□□□□□ -1.04
PTPRR-211ENST00000551219 WWC1Q8IX03 1113 aa8.55□□□□□ -1.04
PTPRR-211ENST00000551219 FAM43AQ8N2R8 423 aa8.55□□□□□ -1.04
PTPRR-211ENST00000551219 KCNV2Q8TDN2 545 aa8.55□□□□□ -1.04
PTPRR-211ENST00000551219 WDR63Q8IWG1 891 aa8.55□□□□□ -1.04
PTPRR-211ENST00000551219 SHPRHQ149N8 1683 aa8.54□□□□□ -1.04
PTPRR-211ENST00000551219 CCDC27Q2M243 656 aa8.54□□□□□ -1.04
PTPRR-211ENST00000551219 ZC3H15Q8WU90 426 aaKnown RBP8.54□□□□□ -1.04
PTPRR-211ENST00000551219 RUNDC1Q96C34 613 aa8.54□□□□□ -1.04
PTPRR-211ENST00000551219 EFCAB6Q5THR3 1501 aa8.54□□□□□ -1.04
PTPRR-211ENST00000551219 LMTK2Q8IWU2 1503 aa8.54□□□□□ -1.04
PTPRR-211ENST00000551219 L1TD1Q5T7N2 865 aaKnown RBP8.54□□□□□ -1.04
PTPRR-211ENST00000551219 FANCAO15360 1455 aa8.54□□□□□ -1.04
PTPRR-211ENST00000551219 GTPBP6O43824 516 aaPredicted RBP8.53□□□□□ -1.04
PTPRR-211ENST00000551219 CARD14Q9BXL6 1004 aa8.53□□□□□ -1.04
PTPRR-211ENST00000551219 ADGRL1O94910 1474 aa8.53□□□□□ -1.04
PTPRR-211ENST00000551219 ABCA9Q8IUA7 1624 aa8.53□□□□□ -1.04
PTPRR-211ENST00000551219 KIF1BO60333 1816 aa8.53□□□□□ -1.04
PTPRR-211ENST00000551219 CDK11BP21127 795 aaKnown RBP8.53□□□□□ -1.04
PTPRR-211ENST00000551219 MTMR7Q9Y216 660 aa8.53□□□□□ -1.04
PTPRR-211ENST00000551219 ERCC6L2Q5T890 1561 aa8.53□□□□□ -1.04
PTPRR-211ENST00000551219 MROH1Q8NDA8 1641 aa8.53□□□□□ -1.04
PTPRR-211ENST00000551219 RARSP54136 660 aaKnown RBP8.52□□□□□ -1.04
PTPRR-211ENST00000551219 RNF25Q96BH1 459 aaPredicted RBP8.52□□□□□ -1.04
PTPRR-211ENST00000551219 ADGRB3O60242 1522 aa8.52□□□□□ -1.05
PTPRR-211ENST00000551219 NSD2O96028 1365 aa8.52□□□□□ -1.05
PTPRR-211ENST00000551219 CT47B1P0C2W7 299 aaPredicted RBP8.52□□□□□ -1.05
PTPRR-211ENST00000551219 TBC1D32Q96NH3 1257 aa8.52□□□□□ -1.05
PTPRR-211ENST00000551219 RWDD1Q9H446 243 aaPredicted RBP8.52□□□□□ -1.05
PTPRR-211ENST00000551219 COG6Q9Y2V7 657 aa8.52□□□□□ -1.05
PTPRR-211ENST00000551219 ZC3H13Q5T200 1668 aaKnown RBP8.52□□□□□ -1.05
PTPRR-211ENST00000551219 NSD3Q9BZ95 1437 aa8.52□□□□□ -1.05
PTPRR-211ENST00000551219 CFAP70Q5T0N1 1121 aa8.52□□□□□ -1.05
PTPRR-211ENST00000551219 PANK1Q8TE04 598 aa8.52□□□□□ -1.05
PTPRR-211ENST00000551219 CFAP53Q96M91 514 aa8.52□□□□□ -1.05
PTPRR-211ENST00000551219 PUS7Q96PZ0 661 aaKnown RBP8.52□□□□□ -1.05
PTPRR-211ENST00000551219 DMRT2Q9Y5R5 561 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms