RNA–Protein interactions for RNA: ENST00000551189.1

DDX23-209, Transcript of DEAD-box helicase 23, humanhuman

TSL 4

Gene DDX23, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-209ENST00000551189 ROBO2Q9HCK4 1378 aa13.58□□□□□ -0.23
DDX23-209ENST00000551189 PLEKHH1Q9ULM0 1364 aa13.58□□□□□ -0.23
DDX23-209ENST00000551189 PTCH1Q13635 1447 aa13.58□□□□□ -0.24
DDX23-209ENST00000551189 XRN1Q8IZH2 1706 aaKnown RBP13.58□□□□□ -0.24
DDX23-209ENST00000551189 KCNA6P17658 529 aa13.57□□□□□ -0.24
DDX23-209ENST00000551189 CHD2O14647 1828 aaKnown RBP13.56□□□□□ -0.24
DDX23-209ENST00000551189 STRCQ7RTU9 1775 aa13.55□□□□□ -0.24
DDX23-209ENST00000551189 SRPK2P78362 688 aaKnown RBP13.55□□□□□ -0.24
DDX23-209ENST00000551189 TULP4Q9NRJ4 1543 aa13.54□□□□□ -0.24
DDX23-209ENST00000551189 DMRT2Q9Y5R5 561 aa13.54□□□□□ -0.24
DDX23-209ENST00000551189 NWD1Q149M9 1564 aa13.54□□□□□ -0.24
DDX23-209ENST00000551189 C14orf37Q86TY3 774 aa13.52□□□□□ -0.25
DDX23-209ENST00000551189 PUS7Q96PZ0 661 aaKnown RBP13.52□□□□□ -0.25
DDX23-209ENST00000551189 CDK19Q9BWU1 502 aa13.52□□□□□ -0.25
DDX23-209ENST00000551189 CABP2Q9NPB3 220 aa13.52□□□□□ -0.25
DDX23-209ENST00000551189 NKTRP30414 1462 aaKnown RBP13.51□□□□□ -0.25
DDX23-209ENST00000551189 ATAD2Q6PL18 1390 aa13.51□□□□□ -0.25
DDX23-209ENST00000551189 WASLO00401 505 aaPredicted RBP13.51□□□□□ -0.25
DDX23-209ENST00000551189 PROSER2Q86WR7 435 aaPredicted RBP13.51□□□□□ -0.25
DDX23-209ENST00000551189 TMC1Q8TDI8 760 aa13.51□□□□□ -0.25
DDX23-209ENST00000551189 ADGRB2O60241 1585 aa13.5□□□□□ -0.25
DDX23-209ENST00000551189 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.5□□□□□ -0.25
DDX23-209ENST00000551189 PANK3Q9H999 370 aa13.48□□□□□ -0.25
DDX23-209ENST00000551189 NINLQ9Y2I6 1382 aa13.47□□□□□ -0.25
DDX23-209ENST00000551189 ANP32CO43423 234 aa13.47□□□□□ -0.25
DDX23-209ENST00000551189 RBM33Q96EV2 1170 aaKnown RBP13.47□□□□□ -0.25
DDX23-209ENST00000551189 MYOM1P52179 1685 aa13.47□□□□□ -0.25
DDX23-209ENST00000551189 ADGRL3Q9HAR2 1447 aa13.46□□□□□ -0.26
DDX23-209ENST00000551189 ZNF335Q9H4Z2 1342 aaPredicted RBP13.45□□□□□ -0.26
DDX23-209ENST00000551189 NALCNQ8IZF0 1738 aa13.45□□□□□ -0.26
DDX23-209ENST00000551189 NUDT16Q96DE0 195 aaKnown RBP13.45□□□□□ -0.26
DDX23-209ENST00000551189 SLC12A5Q9H2X9 1139 aa13.45□□□□□ -0.26
DDX23-209ENST00000551189 NUTM2FA1L443 756 aa13.44□□□□□ -0.26
DDX23-209ENST00000551189 STRCP1A6NGW2 1772 aa13.44□□□□□ -0.26
DDX23-209ENST00000551189 CDC42BPGQ6DT37 1551 aa13.44□□□□□ -0.26
DDX23-209ENST00000551189 TMEM94Q12767 1356 aa13.44□□□□□ -0.26
DDX23-209ENST00000551189 CNGB1Q14028 1251 aaPredicted RBP13.43□□□□□ -0.26
DDX23-209ENST00000551189 PPIP5K1Q6PFW1 1433 aa13.43□□□□□ -0.26
DDX23-209ENST00000551189 HDGFL2Q7Z4V5 671 aaPredicted RBP13.43□□□□□ -0.26
DDX23-209ENST00000551189 TERF2IPQ9NYB0 399 aa13.43□□□□□ -0.26
DDX23-209ENST00000551189 CABP1Q9NZU7 370 aa13.43□□□□□ -0.26
DDX23-209ENST00000551189 KNSTRNQ9Y448 316 aa13.43□□□□□ -0.26
DDX23-209ENST00000551189 ATP7BP35670 1465 aa13.42□□□□□ -0.26
DDX23-209ENST00000551189 NCOA3Q9Y6Q9 1424 aa13.42□□□□□ -0.26
DDX23-209ENST00000551189 CCDC61Q9Y6R9 512 aa13.42□□□□□ -0.26
DDX23-209ENST00000551189 ANKRD36BQ8N2N9 1353 aa13.42□□□□□ -0.26
DDX23-209ENST00000551189 FMN2Q9NZ56 1722 aa13.42□□□□□ -0.26
DDX23-209ENST00000551189 ANKARQ7Z5J8 1434 aa13.41□□□□□ -0.26
DDX23-209ENST00000551189 MIER1Q8N108 512 aa13.41□□□□□ -0.26
DDX23-209ENST00000551189 MSH6P52701 1360 aa13.41□□□□□ -0.26
DDX23-209ENST00000551189 PRR36Q9H6K5 1346 aa13.4□□□□□ -0.26
DDX23-209ENST00000551189 ATF3P18847 181 aa13.4□□□□□ -0.26
DDX23-209ENST00000551189 C19orf44Q9H6X5 657 aa13.4□□□□□ -0.26
DDX23-209ENST00000551189 NSD3Q9BZ95 1437 aa13.39□□□□□ -0.27
DDX23-209ENST00000551189 ITSN1Q15811 1721 aa13.39□□□□□ -0.27
DDX23-209ENST00000551189 A0A1W2PP64 1363 aa13.39□□□□□ -0.27
DDX23-209ENST00000551189 KTN1Q86UP2 1357 aaKnown RBP13.39□□□□□ -0.27
DDX23-209ENST00000551189 LRRC7Q96NW7 1537 aa13.39□□□□□ -0.27
DDX23-209ENST00000551189 TOPAZ1Q8N9V7 1692 aa13.38□□□□□ -0.27
DDX23-209ENST00000551189 USP32Q8NFA0 1604 aa13.38□□□□□ -0.27
DDX23-209ENST00000551189 PER1O15534 1290 aaPredicted RBP13.37□□□□□ -0.27
DDX23-209ENST00000551189 CC2D1BQ5T0F9 858 aaKnown RBP13.37□□□□□ -0.27
DDX23-209ENST00000551189 CARD14Q9BXL6 1004 aa13.37□□□□□ -0.27
DDX23-209ENST00000551189 DCCP43146 1447 aa13.37□□□□□ -0.27
DDX23-209ENST00000551189 PLEKHG3A1L390 1219 aa13.36□□□□□ -0.27
DDX23-209ENST00000551189 CADPS2Q86UW7 1296 aa13.36□□□□□ -0.27
DDX23-209ENST00000551189 NGDNQ8NEJ9 315 aaKnown RBP13.36□□□□□ -0.27
DDX23-209ENST00000551189 PMFBP1Q8TBY8 1022 aa13.36□□□□□ -0.27
DDX23-209ENST00000551189 CGNL1Q0VF96 1302 aa13.36□□□□□ -0.27
DDX23-209ENST00000551189 CD163L1Q9NR16 1453 aa13.36□□□□□ -0.27
DDX23-209ENST00000551189 RALBP1Q15311 655 aa13.35□□□□□ -0.27
DDX23-209ENST00000551189 ESCO1Q5FWF5 840 aa13.35□□□□□ -0.27
DDX23-209ENST00000551189 ZNF692Q9BU19 519 aaPredicted RBP13.35□□□□□ -0.27
DDX23-209ENST00000551189 PRKRIP1Q9H875 184 aaPredicted RBP13.35□□□□□ -0.27
DDX23-209ENST00000551189 ACEP12821 1306 aa13.35□□□□□ -0.27
DDX23-209ENST00000551189 PHF8Q9UPP1 1060 aa13.34□□□□□ -0.27
DDX23-209ENST00000551189 RGPD8O14715 1765 aaPredicted RBP13.34□□□□□ -0.27
DDX23-209ENST00000551189 XIRP1Q702N8 1843 aaKnown RBP13.34□□□□□ -0.27
DDX23-209ENST00000551189 AKAP12Q02952 1782 aa13.33□□□□□ -0.28
DDX23-209ENST00000551189 EDC4Q6P2E9 1401 aaKnown RBP13.33□□□□□ -0.28
DDX23-209ENST00000551189 AMER1Q5JTC6 1135 aaPredicted RBP13.33□□□□□ -0.28
DDX23-209ENST00000551189 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.33□□□□□ -0.28
DDX23-209ENST00000551189 C1orf167Q5SNV9 1468 aa13.33□□□□□ -0.28
DDX23-209ENST00000551189 NPC1L1Q9UHC9 1359 aa13.32□□□□□ -0.28
DDX23-209ENST00000551189 CPSF1Q10570 1443 aaKnown RBP13.32□□□□□ -0.28
DDX23-209ENST00000551189 NSD2O96028 1365 aa13.32□□□□□ -0.28
DDX23-209ENST00000551189 MST1RQ04912 1400 aa13.31□□□□□ -0.28
DDX23-209ENST00000551189 MON2Q7Z3U7 1717 aa13.31□□□□□ -0.28
DDX23-209ENST00000551189 POLR3AO14802 1390 aaPredicted RBP13.31□□□□□ -0.28
DDX23-209ENST00000551189 PARD3Q8TEW0 1356 aa13.31□□□□□ -0.28
DDX23-209ENST00000551189 USP6P35125 1406 aa13.3□□□□□ -0.28
DDX23-209ENST00000551189 CCER2I3L3R5 266 aa13.3□□□□□ -0.28
DDX23-209ENST00000551189 MORC1Q86VD1 984 aa13.3□□□□□ -0.28
DDX23-209ENST00000551189 ORAI2Q96SN7 254 aa13.3□□□□□ -0.28
DDX23-209ENST00000551189 LTBP4Q8N2S1 1624 aa13.3□□□□□ -0.28
DDX23-209ENST00000551189 KIF1AQ12756 1690 aa13.3□□□□□ -0.28
DDX23-209ENST00000551189 MYBBP1AQ9BQG0 1328 aaKnown RBP13.29□□□□□ -0.28
DDX23-209ENST00000551189 KIF20BQ96Q89 1820 aa13.29□□□□□ -0.28
DDX23-209ENST00000551189 PSME1Q06323 249 aa13.28□□□□□ -0.28
DDX23-209ENST00000551189 GGNBP2Q9H3C7 697 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms