RNA–Protein interactions for RNA: ENST00000550589.1

CCDC59-204, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-204ENST00000550589 TSPY4P0CV99 314 aa6.07□□□□□ -1.44
CCDC59-204ENST00000550589 TSPY10P0CW01 314 aa6.07□□□□□ -1.44
CCDC59-204ENST00000550589 DDX10Q13206 875 aaKnown RBP6.07□□□□□ -1.44
CCDC59-204ENST00000550589 KCNK17Q96T54 332 aa6.07□□□□□ -1.44
CCDC59-204ENST00000550589 NUP160Q12769 1436 aa6.07□□□□□ -1.44
CCDC59-204ENST00000550589 RAPGEF6Q8TEU7 1601 aa6.07□□□□□ -1.44
CCDC59-204ENST00000550589 NUP153P49790 1475 aaKnown RBP6.07□□□□□ -1.44
CCDC59-204ENST00000550589 DAPK1P53355 1430 aa6.07□□□□□ -1.44
CCDC59-204ENST00000550589 ARID3CA6NKF2 412 aa6.07□□□□□ -1.44
CCDC59-204ENST00000550589 TK2O00142 265 aa6.07□□□□□ -1.44
CCDC59-204ENST00000550589 EIF4G2P78344 907 aaKnown RBP eCLIP6.07□□□□□ -1.44
CCDC59-204ENST00000550589 EPAS1Q99814 870 aa6.07□□□□□ -1.44
CCDC59-204ENST00000550589 CDK13Q14004 1512 aaKnown RBP6.06□□□□□ -1.44
CCDC59-204ENST00000550589 NBR1Q14596 966 aa6.06□□□□□ -1.44
CCDC59-204ENST00000550589 TSR1Q2NL82 804 aaKnown RBP6.06□□□□□ -1.44
CCDC59-204ENST00000550589 RBM33Q96EV2 1170 aaKnown RBP6.06□□□□□ -1.44
CCDC59-204ENST00000550589 MAGI3Q5TCQ9 1506 aa6.06□□□□□ -1.44
CCDC59-204ENST00000550589 ANKRD30AQ9BXX3 1397 aa6.06□□□□□ -1.44
CCDC59-204ENST00000550589 EN1Q05925 392 aaPredicted RBP6.05□□□□□ -1.44
CCDC59-204ENST00000550589 C6orf132Q5T0Z8 1188 aa6.05□□□□□ -1.44
CCDC59-204ENST00000550589 FBXW7Q969H0 707 aa6.05□□□□□ -1.44
CCDC59-204ENST00000550589 PTPREP23469 700 aa6.04□□□□□ -1.44
CCDC59-204ENST00000550589 ZBED2Q9BTP6 218 aa6.04□□□□□ -1.44
CCDC59-204ENST00000550589 ZNF777Q9ULD5 760 aaPredicted RBP6.04□□□□□ -1.44
CCDC59-204ENST00000550589 LRRIQ1Q96JM4 1722 aa6.04□□□□□ -1.44
CCDC59-204ENST00000550589 ABCC5O15440 1437 aa6.04□□□□□ -1.44
CCDC59-204ENST00000550589 GCC2Q8IWJ2 1684 aa6.04□□□□□ -1.44
CCDC59-204ENST00000550589 TESPA1A2RU30 521 aaPredicted RBP6.04□□□□□ -1.44
CCDC59-204ENST00000550589 FAM181BA6NEQ2 426 aa6.04□□□□□ -1.44
CCDC59-204ENST00000550589 HRO43593 1189 aa6.04□□□□□ -1.44
CCDC59-204ENST00000550589 VPS9D1Q9Y2B5 631 aa6.04□□□□□ -1.44
CCDC59-204ENST00000550589 PTPRGP23470 1445 aa6.03□□□□□ -1.44
CCDC59-204ENST00000550589 ITSN2Q9NZM3 1697 aa6.03□□□□□ -1.44
CCDC59-204ENST00000550589 DNMT1P26358 1616 aaKnown RBP6.03□□□□□ -1.44
CCDC59-204ENST00000550589 SLC4A5Q9BY07 1137 aa6.02□□□□□ -1.45
CCDC59-204ENST00000550589 CDHR5Q9HBB8 845 aa6.02□□□□□ -1.45
CCDC59-204ENST00000550589 NPDC1Q9NQX5 325 aaPredicted RBP6.02□□□□□ -1.45
CCDC59-204ENST00000550589 PRG4Q92954 1404 aaPredicted RBP6.02□□□□□ -1.45
CCDC59-204ENST00000550589 CEP170Q5SW79 1584 aa6.02□□□□□ -1.45
CCDC59-204ENST00000550589 PLB1Q6P1J6 1458 aa6.02□□□□□ -1.45
CCDC59-204ENST00000550589 GPATCH8Q9UKJ3 1502 aaKnown RBP6.02□□□□□ -1.45
CCDC59-204ENST00000550589 PTPN5P54829 565 aa6.02□□□□□ -1.45
CCDC59-204ENST00000550589 NCOA1Q15788 1441 aa6.02□□□□□ -1.45
CCDC59-204ENST00000550589 PROX2Q3B8N5 592 aa6.02□□□□□ -1.45
CCDC59-204ENST00000550589 ANKRD30BQ9BXX2 1392 aa6.01□□□□□ -1.45
CCDC59-204ENST00000550589 PPP1R3GB7ZBB8 358 aa6.01□□□□□ -1.45
CCDC59-204ENST00000550589 BHMG1C9JSJ3 638 aaPredicted RBP6.01□□□□□ -1.45
CCDC59-204ENST00000550589 NEFLP07196 543 aa6.01□□□□□ -1.45
CCDC59-204ENST00000550589 L3MBTL2Q969R5 705 aa6.01□□□□□ -1.45
CCDC59-204ENST00000550589 CAMSAP2Q08AD1 1489 aa6.01□□□□□ -1.45
CCDC59-204ENST00000550589 MAP3K7O43318 606 aa6.01□□□□□ -1.45
CCDC59-204ENST00000550589 ADGRL2O95490 1459 aa6.01□□□□□ -1.45
CCDC59-204ENST00000550589 RPRD2Q5VT52 1461 aaKnown RBP6.01□□□□□ -1.45
CCDC59-204ENST00000550589 ZNF644Q9H582 1327 aaPredicted RBP6□□□□□ -1.45
CCDC59-204ENST00000550589 KIF14Q15058 1648 aa6□□□□□ -1.45
CCDC59-204ENST00000550589 ANKRD50Q9ULJ7 1429 aa6□□□□□ -1.45
CCDC59-204ENST00000550589 ARID4BQ4LE39 1312 aaPredicted RBP6□□□□□ -1.45
CCDC59-204ENST00000550589 SHANK2Q9UPX8 1470 aa6□□□□□ -1.45
CCDC59-204ENST00000550589 C3orf80F5H4A9 247 aa5.99□□□□□ -1.45
CCDC59-204ENST00000550589 HSPA5P11021 654 aaKnown RBP5.99□□□□□ -1.45
CCDC59-204ENST00000550589 FAM198AQ9UFP1 575 aa5.99□□□□□ -1.45
CCDC59-204ENST00000550589 ADCY10Q96PN6 1610 aa5.99□□□□□ -1.45
CCDC59-204ENST00000550589 ATP10BO94823 1461 aa5.99□□□□□ -1.45
CCDC59-204ENST00000550589 HIRIP3Q9BW71 556 aaPredicted RBP5.99□□□□□ -1.45
CCDC59-204ENST00000550589 KIAA1107Q9UPP5 1409 aa5.99□□□□□ -1.45
CCDC59-204ENST00000550589 ABCA8O94911 1581 aa5.98□□□□□ -1.45
CCDC59-204ENST00000550589 RBM26Q5T8P6 1007 aaKnown RBP5.98□□□□□ -1.45
CCDC59-204ENST00000550589 TSKSQ9UJT2 592 aa5.98□□□□□ -1.45
CCDC59-204ENST00000550589 NUP155O75694 1391 aa5.98□□□□□ -1.45
CCDC59-204ENST00000550589 C9orf84Q5VXU9 1444 aa5.98□□□□□ -1.45
CCDC59-204ENST00000550589 PLEKHH2Q8IVE3 1493 aa5.97□□□□□ -1.45
CCDC59-204ENST00000550589 SLC24A1O60721 1099 aa5.96□□□□□ -1.45
CCDC59-204ENST00000550589 ABCC10Q5T3U5 1492 aa5.96□□□□□ -1.46
CCDC59-204ENST00000550589 KIF15Q9NS87 1388 aa5.96□□□□□ -1.46
CCDC59-204ENST00000550589 WASHC2AQ641Q2 1341 aa5.96□□□□□ -1.46
CCDC59-204ENST00000550589 TRIM6-TRIM34B2RNG4 842 aa5.96□□□□□ -1.46
CCDC59-204ENST00000550589 TTC13Q8NBP0 860 aa5.96□□□□□ -1.46
CCDC59-204ENST00000550589 KCNH8Q96L42 1107 aa5.96□□□□□ -1.46
CCDC59-204ENST00000550589 KIAA1468Q9P260 1216 aa5.96□□□□□ -1.46
CCDC59-204ENST00000550589 SUPT16HQ9Y5B9 1047 aaKnown RBP5.96□□□□□ -1.46
CCDC59-204ENST00000550589 CCDC141Q6ZP82 1450 aa5.95□□□□□ -1.46
CCDC59-204ENST00000550589 ROCK2O75116 1388 aaKnown RBP5.95□□□□□ -1.46
CCDC59-204ENST00000550589 GPR37O15354 613 aa5.95□□□□□ -1.46
CCDC59-204ENST00000550589 HNRNPMP52272 730 aaKnown RBP eCLIP5.95□□□□□ -1.46
CCDC59-204ENST00000550589 PTGDRQ13258 359 aa5.95□□□□□ -1.46
CCDC59-204ENST00000550589 CDCA7LQ96GN5 454 aa5.95□□□□□ -1.46
CCDC59-204ENST00000550589 ADGBQ8N7X0 1667 aa5.95□□□□□ -1.46
CCDC59-204ENST00000550589 DENND4BO75064 1496 aaPredicted RBP5.95□□□□□ -1.46
CCDC59-204ENST00000550589 ONECUT3O60422 494 aaPredicted RBP5.95□□□□□ -1.46
CCDC59-204ENST00000550589 PRSS12P56730 875 aa5.95□□□□□ -1.46
CCDC59-204ENST00000550589 EFCAB2Q5VUJ9 269 aa5.95□□□□□ -1.46
CCDC59-204ENST00000550589 KRTAP4-8Q9BYQ9 185 aa5.95□□□□□ -1.46
CCDC59-204ENST00000550589 RABGEF1Q9UJ41 708 aa5.95□□□□□ -1.46
CCDC59-204ENST00000550589 ARHGEF5Q12774 1597 aa5.95□□□□□ -1.46
CCDC59-204ENST00000550589 CNTLNQ9NXG0 1405 aa5.94□□□□□ -1.46
CCDC59-204ENST00000550589 CCDC7Q96M83 1385 aa5.94□□□□□ -1.46
CCDC59-204ENST00000550589 MYT1Q01538 1121 aa5.94□□□□□ -1.46
CCDC59-204ENST00000550589 PZPP20742 1482 aa5.94□□□□□ -1.46
CCDC59-204ENST00000550589 KDM5BQ9UGL1 1544 aa5.93□□□□□ -1.46
CCDC59-204ENST00000550589 TEX14Q8IWB6 1497 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms