RNA–Protein interactions for RNA: ENST00000550582.2

NR4A1-216, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 5

Gene NR4A1, Length 607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-216ENST00000550582 PRAG1Q86YV5 1406 aa21.84■■□□□ 1.09
NR4A1-216ENST00000550582 COL22A1Q8NFW1 1626 aaPredicted RBP21.84■■□□□ 1.09
NR4A1-216ENST00000550582 XPCQ01831 940 aaPredicted RBP21.83■■□□□ 1.09
NR4A1-216ENST00000550582 MYOM2P54296 1465 aa21.82■■□□□ 1.08
NR4A1-216ENST00000550582 NPHP3Q7Z494 1330 aa21.81■■□□□ 1.08
NR4A1-216ENST00000550582 FOXO3O43524 673 aa21.81■■□□□ 1.08
NR4A1-216ENST00000550582 PPLO60437 1756 aa21.8■■□□□ 1.08
NR4A1-216ENST00000550582 BCL9LQ86UU0 1499 aa21.8■■□□□ 1.08
NR4A1-216ENST00000550582 PXDNQ92626 1479 aa21.8■■□□□ 1.08
NR4A1-216ENST00000550582 SLC4A1APQ9BWU0 796 aaKnown RBP21.8■■□□□ 1.08
NR4A1-216ENST00000550582 NUTM2FA1L443 756 aa21.79■■□□□ 1.08
NR4A1-216ENST00000550582 RRBP1Q9P2E9 1410 aaKnown RBP21.79■■□□□ 1.08
NR4A1-216ENST00000550582 EP400Q96L91 3159 aa21.79■■□□□ 1.08
NR4A1-216ENST00000550582 ZRANB1Q9UGI0 708 aa21.78■■□□□ 1.08
NR4A1-216ENST00000550582 CDC42BPGQ6DT37 1551 aa21.78■■□□□ 1.08
NR4A1-216ENST00000550582 WAPLQ7Z5K2 1190 aa21.77■■□□□ 1.08
NR4A1-216ENST00000550582 STK26Q9P289 416 aa21.77■■□□□ 1.08
NR4A1-216ENST00000550582 FOXD1Q16676 465 aa21.76■■□□□ 1.07
NR4A1-216ENST00000550582 GJD4Q96KN9 370 aaPredicted RBP21.76■■□□□ 1.07
NR4A1-216ENST00000550582 ADGRF5Q8IZF2 1346 aa21.76■■□□□ 1.07
NR4A1-216ENST00000550582 MARF1Q9Y4F3 1742 aaKnown RBP21.74■■□□□ 1.07
NR4A1-216ENST00000550582 CCDC125Q86Z20 511 aa21.73■■□□□ 1.07
NR4A1-216ENST00000550582 RGL3Q3MIN7 710 aa21.72■■□□□ 1.07
NR4A1-216ENST00000550582 LRPPRCP42704 1394 aaKnown RBP21.72■■□□□ 1.07
NR4A1-216ENST00000550582 TMEM132EQ6IEE7 984 aa21.71■■□□□ 1.07
NR4A1-216ENST00000550582 PLEKHH1Q9ULM0 1364 aa21.71■■□□□ 1.07
NR4A1-216ENST00000550582 UNC5CLQ8IV45 518 aa21.69■■□□□ 1.06
NR4A1-216ENST00000550582 TECPR2O15040 1411 aa21.69■■□□□ 1.06
NR4A1-216ENST00000550582 RALGAPBQ86X10 1494 aa21.67■■□□□ 1.06
NR4A1-216ENST00000550582 SPATA31A3Q5VYP0 1347 aa21.67■■□□□ 1.06
NR4A1-216ENST00000550582 GLI3P10071 1580 aa21.66■■□□□ 1.06
NR4A1-216ENST00000550582 SLIT2O94813 1529 aa21.66■■□□□ 1.06
NR4A1-216ENST00000550582 ABCC11Q96J66 1382 aa21.66■■□□□ 1.06
NR4A1-216ENST00000550582 CCDC144AA2RUR9 1427 aa21.65■■□□□ 1.06
NR4A1-216ENST00000550582 KRT28Q7Z3Y7 464 aa21.65■■□□□ 1.06
NR4A1-216ENST00000550582 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.65■■□□□ 1.06
NR4A1-216ENST00000550582 SPATA31E1Q6ZUB1 1445 aa21.64■■□□□ 1.06
NR4A1-216ENST00000550582 FMN2Q9NZ56 1722 aa21.63■■□□□ 1.05
NR4A1-216ENST00000550582 ANKRD30BQ9BXX2 1392 aa21.63■■□□□ 1.05
NR4A1-216ENST00000550582 PLEKHG5O94827 1062 aa21.63■■□□□ 1.05
NR4A1-216ENST00000550582 DEFB132Q7Z7B7 95 aa21.62■■□□□ 1.05
NR4A1-216ENST00000550582 CABLES1Q8TDN4 633 aa21.62■■□□□ 1.05
NR4A1-216ENST00000550582 BLMP54132 1417 aaPredicted RBP21.62■■□□□ 1.05
NR4A1-216ENST00000550582 KNDC1Q76NI1 1749 aa21.61■■□□□ 1.05
NR4A1-216ENST00000550582 IFT172Q9UG01 1749 aa21.61■■□□□ 1.05
NR4A1-216ENST00000550582 YTHDC2Q9H6S0 1430 aaKnown RBP21.61■■□□□ 1.05
NR4A1-216ENST00000550582 KIF1AQ12756 1690 aa21.6■■□□□ 1.05
NR4A1-216ENST00000550582 USP32Q8NFA0 1604 aa21.6■■□□□ 1.05
NR4A1-216ENST00000550582 HAP1P54257 671 aaPredicted RBP21.6■■□□□ 1.05
NR4A1-216ENST00000550582 SEPT12Q8IYM1 358 aa21.6■■□□□ 1.05
NR4A1-216ENST00000550582 PIK3C2GO75747 1445 aa21.6■■□□□ 1.05
NR4A1-216ENST00000550582 BRWD3Q6RI45 1802 aa21.59■■□□□ 1.05
NR4A1-216ENST00000550582 MPHOSPH9Q99550 1183 aa21.58■■□□□ 1.05
NR4A1-216ENST00000550582 PHF8Q9UPP1 1060 aa21.58■■□□□ 1.05
NR4A1-216ENST00000550582 TNS3Q68CZ2 1445 aa21.57■■□□□ 1.04
NR4A1-216ENST00000550582 RGPD8O14715 1765 aaPredicted RBP21.56■■□□□ 1.04
NR4A1-216ENST00000550582 PSME1Q06323 249 aa21.56■■□□□ 1.04
NR4A1-216ENST00000550582 VPS72Q15906 364 aa21.56■■□□□ 1.04
NR4A1-216ENST00000550582 LMOD2Q6P5Q4 547 aa21.56■■□□□ 1.04
NR4A1-216ENST00000550582 CCDC9Q9Y3X0 531 aaKnown RBP21.56■■□□□ 1.04
NR4A1-216ENST00000550582 SF3B2Q13435 895 aaKnown RBP21.55■■□□□ 1.04
NR4A1-216ENST00000550582 SIRT1Q96EB6 747 aa21.55■■□□□ 1.04
NR4A1-216ENST00000550582 SAFB2Q14151 953 aaKnown RBP eCLIP21.54■■□□□ 1.04
NR4A1-216ENST00000550582 C14orf93Q9H972 538 aaKnown RBP21.53■■□□□ 1.04
NR4A1-216ENST00000550582 ONECUT3O60422 494 aaPredicted RBP21.52■■□□□ 1.04
NR4A1-216ENST00000550582 CFAP70Q5T0N1 1121 aa21.52■■□□□ 1.04
NR4A1-216ENST00000550582 KRT27Q7Z3Y8 459 aa21.52■■□□□ 1.04
NR4A1-216ENST00000550582 PLCH1Q4KWH8 1693 aa21.52■■□□□ 1.04
NR4A1-216ENST00000550582 NRXN1Q9ULB1 1477 aa21.51■■□□□ 1.03
NR4A1-216ENST00000550582 SBNO1A3KN83 1393 aa21.5■■□□□ 1.03
NR4A1-216ENST00000550582 FAM83GA6ND36 823 aa21.5■■□□□ 1.03
NR4A1-216ENST00000550582 PMFBP1Q8TBY8 1022 aa21.5■■□□□ 1.03
NR4A1-216ENST00000550582 PRAM1Q96QH2 718 aa21.5■■□□□ 1.03
NR4A1-216ENST00000550582 DHX57Q6P158 1386 aaKnown RBP21.49■■□□□ 1.03
NR4A1-216ENST00000550582 NWD2Q9ULI1 1742 aa21.49■■□□□ 1.03
NR4A1-216ENST00000550582 A0A0G2JS52 829 aa21.48■■□□□ 1.03
NR4A1-216ENST00000550582 MYT1Q01538 1121 aa21.48■■□□□ 1.03
NR4A1-216ENST00000550582 ABCA3Q99758 1704 aa21.48■■□□□ 1.03
NR4A1-216ENST00000550582 ARHGEF10O15013 1369 aa21.48■■□□□ 1.03
NR4A1-216ENST00000550582 PSDA5PKW4 1024 aaPredicted RBP21.45■■□□□ 1.02
NR4A1-216ENST00000550582 FAM98CQ17RN3 349 aaKnown RBP21.45■■□□□ 1.02
NR4A1-216ENST00000550582 POGKQ9P215 609 aa21.45■■□□□ 1.02
NR4A1-216ENST00000550582 BTG4Q9NY30 223 aa21.44■■□□□ 1.02
NR4A1-216ENST00000550582 BAG6P46379 1132 aa21.42■■□□□ 1.02
NR4A1-216ENST00000550582 HIRIP3Q9BW71 556 aaPredicted RBP21.42■■□□□ 1.02
NR4A1-216ENST00000550582 ANKARQ7Z5J8 1434 aa21.41■■□□□ 1.02
NR4A1-216ENST00000550582 NRAPQ86VF7 1730 aa21.41■■□□□ 1.02
NR4A1-216ENST00000550582 LRP5O75197 1615 aa21.4■■□□□ 1.02
NR4A1-216ENST00000550582 FAM182BQ5T319 152 aa21.4■■□□□ 1.02
NR4A1-216ENST00000550582 TRAK1Q9UPV9 953 aa21.39■■□□□ 1.01
NR4A1-216ENST00000550582 DLC1Q96QB1 1528 aa21.39■■□□□ 1.01
NR4A1-216ENST00000550582 TRPM3Q9HCF6 1732 aaPredicted RBP21.38■■□□□ 1.01
NR4A1-216ENST00000550582 HRCP23327 699 aa21.38■■□□□ 1.01
NR4A1-216ENST00000550582 EN1Q05925 392 aaPredicted RBP21.38■■□□□ 1.01
NR4A1-216ENST00000550582 MINK1Q8N4C8 1332 aaPredicted RBP21.37■■□□□ 1.01
NR4A1-216ENST00000550582 PRR36Q9H6K5 1346 aa21.37■■□□□ 1.01
NR4A1-216ENST00000550582 GPRASP1Q5JY77 1395 aa21.36■■□□□ 1.01
NR4A1-216ENST00000550582 COL14A1Q05707 1796 aaKnown RBP21.36■■□□□ 1.01
NR4A1-216ENST00000550582 ADGRB2O60241 1585 aa21.36■■□□□ 1.01
NR4A1-216ENST00000550582 ACIN1Q9UKV3 1341 aaKnown RBP21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms