RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 QTRT2Q9H974 415 aaKnown RBP32.36■■■□□ 2.77
SMARCC2-210ENST00000550519 CDC42BPGQ6DT37 1551 aa32.36■■■□□ 2.77
SMARCC2-210ENST00000550519 ADAMTS2O95450 1211 aa32.35■■■□□ 2.77
SMARCC2-210ENST00000550519 LRPPRCP42704 1394 aaKnown RBP32.34■■■□□ 2.77
SMARCC2-210ENST00000550519 ABCC11Q96J66 1382 aa32.33■■■□□ 2.77
SMARCC2-210ENST00000550519 NGLY1Q96IV0 654 aa32.33■■■□□ 2.77
SMARCC2-210ENST00000550519 STK26Q9P289 416 aa32.33■■■□□ 2.77
SMARCC2-210ENST00000550519 RBM6P78332 1123 aaKnown RBP32.32■■■□□ 2.76
SMARCC2-210ENST00000550519 ESCO1Q5FWF5 840 aa32.32■■■□□ 2.76
SMARCC2-210ENST00000550519 WAPLQ7Z5K2 1190 aa32.32■■■□□ 2.76
SMARCC2-210ENST00000550519 PIK3C2GO75747 1445 aa32.32■■■□□ 2.76
SMARCC2-210ENST00000550519 IFT172Q9UG01 1749 aa32.31■■■□□ 2.76
SMARCC2-210ENST00000550519 NPHP3Q7Z494 1330 aa32.3■■■□□ 2.76
SMARCC2-210ENST00000550519 ACIN1Q9UKV3 1341 aaKnown RBP32.3■■■□□ 2.76
SMARCC2-210ENST00000550519 TMEM132EQ6IEE7 984 aa32.3■■■□□ 2.76
SMARCC2-210ENST00000550519 RGS12O14924 1447 aa32.27■■■□□ 2.76
SMARCC2-210ENST00000550519 PLEKHH1Q9ULM0 1364 aa32.26■■■□□ 2.75
SMARCC2-210ENST00000550519 PXDNQ92626 1479 aa32.25■■■□□ 2.75
SMARCC2-210ENST00000550519 FOXO3O43524 673 aa32.24■■■□□ 2.75
SMARCC2-210ENST00000550519 FNBP4Q8N3X1 1017 aaPredicted RBP32.24■■■□□ 2.75
SMARCC2-210ENST00000550519 COL22A1Q8NFW1 1626 aaPredicted RBP32.24■■■□□ 2.75
SMARCC2-210ENST00000550519 YTHDC2Q9H6S0 1430 aaKnown RBP32.23■■■□□ 2.75
SMARCC2-210ENST00000550519 MYOM2P54296 1465 aa32.23■■■□□ 2.75
SMARCC2-210ENST00000550519 USP21Q9UK80 565 aa32.22■■■□□ 2.75
SMARCC2-210ENST00000550519 KNDC1Q76NI1 1749 aa32.21■■■□□ 2.75
SMARCC2-210ENST00000550519 NUTM2FA1L443 756 aa32.21■■■□□ 2.75
SMARCC2-210ENST00000550519 SIRT1Q96EB6 747 aa32.21■■■□□ 2.75
SMARCC2-210ENST00000550519 C14orf93Q9H972 538 aaKnown RBP32.21■■■□□ 2.75
SMARCC2-210ENST00000550519 XPCQ01831 940 aaPredicted RBP32.19■■■□□ 2.74
SMARCC2-210ENST00000550519 TRPC5Q9UL62 973 aaPredicted RBP32.18■■■□□ 2.74
SMARCC2-210ENST00000550519 NRXN1Q9ULB1 1477 aa32.17■■■□□ 2.74
SMARCC2-210ENST00000550519 CFAP70Q5T0N1 1121 aa32.14■■■□□ 2.74
SMARCC2-210ENST00000550519 ATRNO75882 1429 aa32.13■■■□□ 2.73
SMARCC2-210ENST00000550519 FMN2Q9NZ56 1722 aa32.12■■■□□ 2.73
SMARCC2-210ENST00000550519 DHX57Q6P158 1386 aaKnown RBP32.11■■■□□ 2.73
SMARCC2-210ENST00000550519 RAB3GAP2Q9H2M9 1393 aa32.1■■■□□ 2.73
SMARCC2-210ENST00000550519 BCL9LQ86UU0 1499 aa32.1■■■□□ 2.73
SMARCC2-210ENST00000550519 SPATA31A3Q5VYP0 1347 aa32.08■■■□□ 2.73
SMARCC2-210ENST00000550519 KIF1AQ12756 1690 aa32.05■■■□□ 2.72
SMARCC2-210ENST00000550519 KRT28Q7Z3Y7 464 aa32.05■■■□□ 2.72
SMARCC2-210ENST00000550519 ATAD2Q6PL18 1390 aa32.04■■■□□ 2.72
SMARCC2-210ENST00000550519 PRAM1Q96QH2 718 aa32.03■■■□□ 2.72
SMARCC2-210ENST00000550519 PHF8Q9UPP1 1060 aa32.03■■■□□ 2.72
SMARCC2-210ENST00000550519 MARF1Q9Y4F3 1742 aaKnown RBP32■■■□□ 2.71
SMARCC2-210ENST00000550519 SAFB2Q14151 953 aaKnown RBP eCLIP31.99■■■□□ 2.71
SMARCC2-210ENST00000550519 DLC1Q96QB1 1528 aa31.99■■■□□ 2.71
SMARCC2-210ENST00000550519 GJD4Q96KN9 370 aaPredicted RBP31.98■■■□□ 2.71
SMARCC2-210ENST00000550519 SLIT2O94813 1529 aa31.96■■■□□ 2.71
SMARCC2-210ENST00000550519 PSME1Q06323 249 aa31.96■■■□□ 2.71
SMARCC2-210ENST00000550519 TNS3Q68CZ2 1445 aa31.96■■■□□ 2.71
SMARCC2-210ENST00000550519 POGKQ9P215 609 aa31.96■■■□□ 2.71
SMARCC2-210ENST00000550519 ADGRB1O14514 1584 aa31.95■■■□□ 2.71
SMARCC2-210ENST00000550519 UNC5CLQ8IV45 518 aa31.95■■■□□ 2.71
SMARCC2-210ENST00000550519 SBNO1A3KN83 1393 aa31.94■■■□□ 2.7
SMARCC2-210ENST00000550519 RGPD8O14715 1765 aaPredicted RBP31.93■■■□□ 2.7
SMARCC2-210ENST00000550519 ANKARQ7Z5J8 1434 aa31.92■■■□□ 2.7
SMARCC2-210ENST00000550519 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.91■■■□□ 2.7
SMARCC2-210ENST00000550519 USP32Q8NFA0 1604 aa31.9■■■□□ 2.7
SMARCC2-210ENST00000550519 TRAK1Q9UPV9 953 aa31.9■■■□□ 2.7
SMARCC2-210ENST00000550519 HRCP23327 699 aa31.89■■■□□ 2.7
SMARCC2-210ENST00000550519 CABLES1Q8TDN4 633 aa31.88■■■□□ 2.69
SMARCC2-210ENST00000550519 DCAF11Q8TEB1 546 aa31.88■■■□□ 2.69
SMARCC2-210ENST00000550519 STAC3Q96MF2 364 aa31.88■■■□□ 2.69
SMARCC2-210ENST00000550519 KDM2AQ9Y2K7 1162 aa31.88■■■□□ 2.69
SMARCC2-210ENST00000550519 ADGRB2O60241 1585 aa31.88■■■□□ 2.69
SMARCC2-210ENST00000550519 RALGAPBQ86X10 1494 aa31.87■■■□□ 2.69
SMARCC2-210ENST00000550519 ARHGEF10O15013 1369 aa31.86■■■□□ 2.69
SMARCC2-210ENST00000550519 HAP1P54257 671 aaPredicted RBP31.86■■■□□ 2.69
SMARCC2-210ENST00000550519 PMFBP1Q8TBY8 1022 aa31.86■■■□□ 2.69
SMARCC2-210ENST00000550519 GLI3P10071 1580 aa31.85■■■□□ 2.69
SMARCC2-210ENST00000550519 CCDC125Q86Z20 511 aa31.84■■■□□ 2.69
SMARCC2-210ENST00000550519 HIRIP3Q9BW71 556 aaPredicted RBP31.84■■■□□ 2.69
SMARCC2-210ENST00000550519 EP400Q96L91 3159 aa31.83■■■□□ 2.69
SMARCC2-210ENST00000550519 LMOD2Q6P5Q4 547 aa31.83■■■□□ 2.69
SMARCC2-210ENST00000550519 MINK1Q8N4C8 1332 aaPredicted RBP31.81■■■□□ 2.68
SMARCC2-210ENST00000550519 PRR36Q9H6K5 1346 aa31.8■■■□□ 2.68
SMARCC2-210ENST00000550519 VPS72Q15906 364 aa31.8■■■□□ 2.68
SMARCC2-210ENST00000550519 EIF3AQ14152 1382 aaKnown RBP31.8■■■□□ 2.68
SMARCC2-210ENST00000550519 PLEKHG5O94827 1062 aa31.79■■■□□ 2.68
SMARCC2-210ENST00000550519 WASLO00401 505 aaPredicted RBP31.78■■■□□ 2.68
SMARCC2-210ENST00000550519 TULP4Q9NRJ4 1543 aa31.76■■■□□ 2.68
SMARCC2-210ENST00000550519 FAM83GA6ND36 823 aa31.75■■■□□ 2.67
SMARCC2-210ENST00000550519 GPRASP1Q5JY77 1395 aa31.75■■■□□ 2.67
SMARCC2-210ENST00000550519 ABCA3Q99758 1704 aa31.75■■■□□ 2.67
SMARCC2-210ENST00000550519 ONECUT3O60422 494 aaPredicted RBP31.74■■■□□ 2.67
SMARCC2-210ENST00000550519 SEPT12Q8IYM1 358 aa31.73■■■□□ 2.67
SMARCC2-210ENST00000550519 TRPM3Q9HCF6 1732 aaPredicted RBP31.72■■■□□ 2.67
SMARCC2-210ENST00000550519 NWD2Q9ULI1 1742 aa31.72■■■□□ 2.67
SMARCC2-210ENST00000550519 PLCH1Q4KWH8 1693 aa31.71■■■□□ 2.67
SMARCC2-210ENST00000550519 ZRANB1Q9UGI0 708 aa31.7■■■□□ 2.67
SMARCC2-210ENST00000550519 CCDC9Q9Y3X0 531 aaKnown RBP31.69■■■□□ 2.66
SMARCC2-210ENST00000550519 SRCAPQ6ZRS2 3230 aa31.68■■■□□ 2.66
SMARCC2-210ENST00000550519 BLMP54132 1417 aaPredicted RBP31.68■■■□□ 2.66
SMARCC2-210ENST00000550519 ALS2Q96Q42 1657 aa31.67■■■□□ 2.66
SMARCC2-210ENST00000550519 NGDNQ8NEJ9 315 aaKnown RBP31.67■■■□□ 2.66
SMARCC2-210ENST00000550519 BRWD3Q6RI45 1802 aa31.64■■■□□ 2.66
SMARCC2-210ENST00000550519 BTG4Q9NY30 223 aa31.64■■■□□ 2.66
SMARCC2-210ENST00000550519 ARHGEF28Q8N1W1 1705 aaKnown RBP31.63■■■□□ 2.65
SMARCC2-210ENST00000550519 ATP7BP35670 1465 aa31.62■■■□□ 2.65
SMARCC2-210ENST00000550519 NUDT16Q96DE0 195 aaKnown RBP31.62■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms