RNA–Protein interactions for RNA: ENST00000550380.5

LINC02407-201, Transcript of long intergenic non-protein coding RNA 2407, humanhuman

TSL 4

Gene LINC02407, Length 543 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02407-201ENST00000550380 MYOM1P52179 1685 aa17.2■□□□□ 0.34
LINC02407-201ENST00000550380 TULP4Q9NRJ4 1543 aa17.19■□□□□ 0.34
LINC02407-201ENST00000550380 NCOA3Q9Y6Q9 1424 aa17.18■□□□□ 0.34
LINC02407-201ENST00000550380 PTPRUQ92729 1446 aa17.16■□□□□ 0.34
LINC02407-201ENST00000550380 STK26Q9P289 416 aa17.16■□□□□ 0.34
LINC02407-201ENST00000550380 NPC1L1Q9UHC9 1359 aa17.15■□□□□ 0.34
LINC02407-201ENST00000550380 SLC26A8Q96RN1 970 aa17.15■□□□□ 0.34
LINC02407-201ENST00000550380 AMOTL2Q9Y2J4 779 aa17.15■□□□□ 0.34
LINC02407-201ENST00000550380 DMRT2Q9Y5R5 561 aa17.15■□□□□ 0.34
LINC02407-201ENST00000550380 ROBO2Q9HCK4 1378 aa17.15■□□□□ 0.34
LINC02407-201ENST00000550380 USP32Q8NFA0 1604 aa17.14■□□□□ 0.33
LINC02407-201ENST00000550380 ANP32CO43423 234 aa17.14■□□□□ 0.33
LINC02407-201ENST00000550380 KCNA6P17658 529 aa17.14■□□□□ 0.33
LINC02407-201ENST00000550380 STRCQ7RTU9 1775 aa17.14■□□□□ 0.33
LINC02407-201ENST00000550380 ITSN1Q15811 1721 aa17.13■□□□□ 0.33
LINC02407-201ENST00000550380 CDC42BPGQ6DT37 1551 aa17.13■□□□□ 0.33
LINC02407-201ENST00000550380 ATP7BP35670 1465 aa17.12■□□□□ 0.33
LINC02407-201ENST00000550380 ANKARQ7Z5J8 1434 aa17.11■□□□□ 0.33
LINC02407-201ENST00000550380 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.1■□□□□ 0.33
LINC02407-201ENST00000550380 WASLO00401 505 aaPredicted RBP17.1■□□□□ 0.33
LINC02407-201ENST00000550380 ANKRD36BQ8N2N9 1353 aa17.1■□□□□ 0.33
LINC02407-201ENST00000550380 CCER2I3L3R5 266 aa17.09■□□□□ 0.33
LINC02407-201ENST00000550380 TOPAZ1Q8N9V7 1692 aa17.08■□□□□ 0.32
LINC02407-201ENST00000550380 DCCP43146 1447 aa17.08■□□□□ 0.32
LINC02407-201ENST00000550380 NSD2O96028 1365 aa17.08■□□□□ 0.32
LINC02407-201ENST00000550380 NCKAP5LQ9HCH0 1330 aa17.08■□□□□ 0.32
LINC02407-201ENST00000550380 ADGRL3Q9HAR2 1447 aa17.07■□□□□ 0.32
LINC02407-201ENST00000550380 PLEKHH1Q9ULM0 1364 aa17.07■□□□□ 0.32
LINC02407-201ENST00000550380 PER1O15534 1290 aaPredicted RBP17.07■□□□□ 0.32
LINC02407-201ENST00000550380 SRPK2P78362 688 aaKnown RBP17.07■□□□□ 0.32
LINC02407-201ENST00000550380 RALBP1Q15311 655 aa17.07■□□□□ 0.32
LINC02407-201ENST00000550380 TERF2IPQ9NYB0 399 aa17.07■□□□□ 0.32
LINC02407-201ENST00000550380 MINK1Q8N4C8 1332 aaPredicted RBP17.06■□□□□ 0.32
LINC02407-201ENST00000550380 WAPLQ7Z5K2 1190 aa17.06■□□□□ 0.32
LINC02407-201ENST00000550380 CDK19Q9BWU1 502 aa17.06■□□□□ 0.32
LINC02407-201ENST00000550380 FMN2Q9NZ56 1722 aa17.06■□□□□ 0.32
LINC02407-201ENST00000550380 POLR3GLQ9BT43 218 aa17.05■□□□□ 0.32
LINC02407-201ENST00000550380 KNSTRNQ9Y448 316 aa17.05■□□□□ 0.32
LINC02407-201ENST00000550380 CCDC61Q9Y6R9 512 aa17.05■□□□□ 0.32
LINC02407-201ENST00000550380 NALCNQ8IZF0 1738 aa17.04■□□□□ 0.32
LINC02407-201ENST00000550380 PANK3Q9H999 370 aa17.04■□□□□ 0.32
LINC02407-201ENST00000550380 BRD4O60885 1362 aaPredicted RBP17.03■□□□□ 0.32
LINC02407-201ENST00000550380 PRKRIP1Q9H875 184 aaPredicted RBP17.03■□□□□ 0.32
LINC02407-201ENST00000550380 SAFB2Q14151 953 aaKnown RBP eCLIP17.02■□□□□ 0.32
LINC02407-201ENST00000550380 AKAP12Q02952 1782 aa17.02■□□□□ 0.31
LINC02407-201ENST00000550380 PARD3Q8TEW0 1356 aa17.02■□□□□ 0.31
LINC02407-201ENST00000550380 HDGFL2Q7Z4V5 671 aaPredicted RBP17.01■□□□□ 0.31
LINC02407-201ENST00000550380 ZNF692Q9BU19 519 aaPredicted RBP17.01■□□□□ 0.31
LINC02407-201ENST00000550380 MON2Q7Z3U7 1717 aa17.01■□□□□ 0.31
LINC02407-201ENST00000550380 HSPA2P54652 639 aa17■□□□□ 0.31
LINC02407-201ENST00000550380 CPSF1Q10570 1443 aaKnown RBP17■□□□□ 0.31
LINC02407-201ENST00000550380 CABP2Q9NPB3 220 aa17■□□□□ 0.31
LINC02407-201ENST00000550380 CGNL1Q0VF96 1302 aa16.99■□□□□ 0.31
LINC02407-201ENST00000550380 PPIP5K1Q6PFW1 1433 aa16.99■□□□□ 0.31
LINC02407-201ENST00000550380 PLEKHG3A1L390 1219 aa16.99■□□□□ 0.31
LINC02407-201ENST00000550380 MIER1Q8N108 512 aa16.99■□□□□ 0.31
LINC02407-201ENST00000550380 ANKRD26Q9UPS8 1709 aa16.99■□□□□ 0.31
LINC02407-201ENST00000550380 TMC1Q8TDI8 760 aa16.98■□□□□ 0.31
LINC02407-201ENST00000550380 NUDT16Q96DE0 195 aaKnown RBP16.98■□□□□ 0.31
LINC02407-201ENST00000550380 CD163L1Q9NR16 1453 aa16.98■□□□□ 0.31
LINC02407-201ENST00000550380 STRCP1A6NGW2 1772 aa16.97■□□□□ 0.31
LINC02407-201ENST00000550380 EDC4Q6P2E9 1401 aaKnown RBP16.97■□□□□ 0.31
LINC02407-201ENST00000550380 AMER1Q5JTC6 1135 aaPredicted RBP16.97■□□□□ 0.31
LINC02407-201ENST00000550380 C19orf44Q9H6X5 657 aa16.97■□□□□ 0.31
LINC02407-201ENST00000550380 A0A1W2PP64 1363 aa16.97■□□□□ 0.31
LINC02407-201ENST00000550380 SLC12A5Q9H2X9 1139 aa16.96■□□□□ 0.31
LINC02407-201ENST00000550380 POLR3AO14802 1390 aaPredicted RBP16.96■□□□□ 0.31
LINC02407-201ENST00000550380 KIF1AQ12756 1690 aa16.96■□□□□ 0.31
LINC02407-201ENST00000550380 KIF20BQ96Q89 1820 aa16.95■□□□□ 0.3
LINC02407-201ENST00000550380 NSD3Q9BZ95 1437 aa16.95■□□□□ 0.3
LINC02407-201ENST00000550380 MYBBP1AQ9BQG0 1328 aaKnown RBP16.95■□□□□ 0.3
LINC02407-201ENST00000550380 PROSER2Q86WR7 435 aaPredicted RBP16.94■□□□□ 0.3
LINC02407-201ENST00000550380 CABP1Q9NZU7 370 aa16.93■□□□□ 0.3
LINC02407-201ENST00000550380 NRKQ7Z2Y5 1582 aa16.93■□□□□ 0.3
LINC02407-201ENST00000550380 NLRP13Q86W25 1043 aa16.92■□□□□ 0.3
LINC02407-201ENST00000550380 LRRC7Q96NW7 1537 aa16.91■□□□□ 0.3
LINC02407-201ENST00000550380 MSH6P52701 1360 aa16.91■□□□□ 0.3
LINC02407-201ENST00000550380 TMEM94Q12767 1356 aa16.91■□□□□ 0.3
LINC02407-201ENST00000550380 CADPS2Q86UW7 1296 aa16.91■□□□□ 0.3
LINC02407-201ENST00000550380 CARD14Q9BXL6 1004 aa16.91■□□□□ 0.3
LINC02407-201ENST00000550380 PRR36Q9H6K5 1346 aa16.91■□□□□ 0.3
LINC02407-201ENST00000550380 SCAF1Q9H7N4 1312 aaKnown RBP16.91■□□□□ 0.3
LINC02407-201ENST00000550380 XIRP1Q702N8 1843 aaKnown RBP16.9■□□□□ 0.3
LINC02407-201ENST00000550380 USP54Q70EL1 1684 aa16.9■□□□□ 0.3
LINC02407-201ENST00000550380 INSRP06213 1382 aa16.89■□□□□ 0.3
LINC02407-201ENST00000550380 RGPD8O14715 1765 aaPredicted RBP16.89■□□□□ 0.3
LINC02407-201ENST00000550380 C14orf37Q86TY3 774 aa16.89■□□□□ 0.29
LINC02407-201ENST00000550380 TTC21AQ8NDW8 1320 aa16.89■□□□□ 0.29
LINC02407-201ENST00000550380 USP6P35125 1406 aa16.88■□□□□ 0.29
LINC02407-201ENST00000550380 ATF3P18847 181 aa16.87■□□□□ 0.29
LINC02407-201ENST00000550380 SSH2Q76I76 1423 aa16.87■□□□□ 0.29
LINC02407-201ENST00000550380 ACEP12821 1306 aa16.85■□□□□ 0.29
LINC02407-201ENST00000550380 MST1RQ04912 1400 aa16.84■□□□□ 0.29
LINC02407-201ENST00000550380 C1orf167Q5SNV9 1468 aa16.84■□□□□ 0.29
LINC02407-201ENST00000550380 PHF8Q9UPP1 1060 aa16.83■□□□□ 0.28
LINC02407-201ENST00000550380 IQSEC2Q5JU85 1478 aa16.82■□□□□ 0.28
LINC02407-201ENST00000550380 AATKQ6ZMQ8 1374 aa16.82■□□□□ 0.28
LINC02407-201ENST00000550380 USP31Q70CQ4 1352 aa16.82■□□□□ 0.28
LINC02407-201ENST00000550380 CC2D1BQ5T0F9 858 aaKnown RBP16.82■□□□□ 0.28
LINC02407-201ENST00000550380 MORC1Q86VD1 984 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms