RNA–Protein interactions for RNA: ENST00000550161.5

TMEM106C-214, Transcript of transmembrane protein 106C, humanhuman

TSL 3 BASIC

Gene TMEM106C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-214ENST00000550161 ATF3P18847 181 aa24.75■■□□□ 1.55
TMEM106C-214ENST00000550161 ARHGEF28Q8N1W1 1705 aaKnown RBP24.75■■□□□ 1.55
TMEM106C-214ENST00000550161 TIMELESSQ9UNS1 1208 aa24.74■■□□□ 1.55
TMEM106C-214ENST00000550161 SCAF1Q9H7N4 1312 aaKnown RBP24.73■■□□□ 1.55
TMEM106C-214ENST00000550161 SLAIN2Q9P270 581 aa24.73■■□□□ 1.55
TMEM106C-214ENST00000550161 CDC42BPGQ6DT37 1551 aa24.71■■□□□ 1.55
TMEM106C-214ENST00000550161 RALGAPBQ86X10 1494 aa24.71■■□□□ 1.55
TMEM106C-214ENST00000550161 MST1RQ04912 1400 aa24.71■■□□□ 1.55
TMEM106C-214ENST00000550161 GPRASP1Q5JY77 1395 aa24.71■■□□□ 1.55
TMEM106C-214ENST00000550161 POGKQ9P215 609 aa24.71■■□□□ 1.55
TMEM106C-214ENST00000550161 ROCK2O75116 1388 aaKnown RBP24.7■■□□□ 1.55
TMEM106C-214ENST00000550161 SAFB2Q14151 953 aaKnown RBP eCLIP24.7■■□□□ 1.54
TMEM106C-214ENST00000550161 ROBO1Q9Y6N7 1651 aa24.69■■□□□ 1.54
TMEM106C-214ENST00000550161 ADGRB2O60241 1585 aa24.65■■□□□ 1.54
TMEM106C-214ENST00000550161 C1orf167Q5SNV9 1468 aa24.64■■□□□ 1.54
TMEM106C-214ENST00000550161 FMN2Q9NZ56 1722 aa24.64■■□□□ 1.53
TMEM106C-214ENST00000550161 MINK1Q8N4C8 1332 aaPredicted RBP24.62■■□□□ 1.53
TMEM106C-214ENST00000550161 HSPA1LP34931 641 aa24.62■■□□□ 1.53
TMEM106C-214ENST00000550161 BRINP3Q76B58 766 aa24.61■■□□□ 1.53
TMEM106C-214ENST00000550161 CARD11Q9BXL7 1154 aa24.61■■□□□ 1.53
TMEM106C-214ENST00000550161 HIRIP3Q9BW71 556 aaPredicted RBP24.6■■□□□ 1.53
TMEM106C-214ENST00000550161 CENPJQ9HC77 1338 aaPredicted RBP24.6■■□□□ 1.53
TMEM106C-214ENST00000550161 NUTM2FA1L443 756 aa24.57■■□□□ 1.52
TMEM106C-214ENST00000550161 QRICH2Q9H0J4 1663 aa24.56■■□□□ 1.52
TMEM106C-214ENST00000550161 ORAI2Q96SN7 254 aa24.56■■□□□ 1.52
TMEM106C-214ENST00000550161 WASLO00401 505 aaPredicted RBP24.55■■□□□ 1.52
TMEM106C-214ENST00000550161 EIF3AQ14152 1382 aaKnown RBP24.54■■□□□ 1.52
TMEM106C-214ENST00000550161 AHDC1Q5TGY3 1603 aaPredicted RBP24.54■■□□□ 1.52
TMEM106C-214ENST00000550161 USP32Q8NFA0 1604 aa24.54■■□□□ 1.52
TMEM106C-214ENST00000550161 NHSL1Q5SYE7 1610 aa24.52■■□□□ 1.52
TMEM106C-214ENST00000550161 PHLPP1O60346 1717 aa24.52■■□□□ 1.52
TMEM106C-214ENST00000550161 RGPD8O14715 1765 aaPredicted RBP24.52■■□□□ 1.52
TMEM106C-214ENST00000550161 ANKARQ7Z5J8 1434 aa24.52■■□□□ 1.52
TMEM106C-214ENST00000550161 TULP4Q9NRJ4 1543 aa24.51■■□□□ 1.51
TMEM106C-214ENST00000550161 ESCO1Q5FWF5 840 aa24.51■■□□□ 1.51
TMEM106C-214ENST00000550161 PRR36Q9H6K5 1346 aa24.51■■□□□ 1.51
TMEM106C-214ENST00000550161 CDK19Q9BWU1 502 aa24.49■■□□□ 1.51
TMEM106C-214ENST00000550161 COL16A1Q07092 1604 aaPredicted RBP24.49■■□□□ 1.51
TMEM106C-214ENST00000550161 DDX17Q92841 729 aaKnown RBP24.48■■□□□ 1.51
TMEM106C-214ENST00000550161 ATP7BP35670 1465 aa24.46■■□□□ 1.51
TMEM106C-214ENST00000550161 SBNO2Q9Y2G9 1366 aa24.45■■□□□ 1.5
TMEM106C-214ENST00000550161 KIF1AQ12756 1690 aa24.45■■□□□ 1.5
TMEM106C-214ENST00000550161 NUDT16Q96DE0 195 aaKnown RBP24.44■■□□□ 1.5
TMEM106C-214ENST00000550161 PHF8Q9UPP1 1060 aa24.44■■□□□ 1.5
TMEM106C-214ENST00000550161 USP47Q96K76 1375 aa24.43■■□□□ 1.5
TMEM106C-214ENST00000550161 ST20-MTHFSA0A0A6YYL1 179 aa24.42■■□□□ 1.5
TMEM106C-214ENST00000550161 SOS2Q07890 1332 aaPredicted RBP24.41■■□□□ 1.5
TMEM106C-214ENST00000550161 FOXO3O43524 673 aa24.41■■□□□ 1.5
TMEM106C-214ENST00000550161 CABP2Q9NPB3 220 aa24.41■■□□□ 1.5
TMEM106C-214ENST00000550161 TOPAZ1Q8N9V7 1692 aa24.4■■□□□ 1.5
TMEM106C-214ENST00000550161 EVC2Q86UK5 1308 aa24.4■■□□□ 1.5
TMEM106C-214ENST00000550161 TESK2Q96S53 571 aa24.4■■□□□ 1.5
TMEM106C-214ENST00000550161 PXDNQ92626 1479 aa24.39■■□□□ 1.5
TMEM106C-214ENST00000550161 NPHP3Q7Z494 1330 aa24.39■■□□□ 1.5
TMEM106C-214ENST00000550161 ITSN1Q15811 1721 aa24.39■■□□□ 1.5
TMEM106C-214ENST00000550161 SRPK2P78362 688 aaKnown RBP24.39■■□□□ 1.49
TMEM106C-214ENST00000550161 PMFBP1Q8TBY8 1022 aa24.39■■□□□ 1.49
TMEM106C-214ENST00000550161 JCADQ9P266 1359 aa24.37■■□□□ 1.49
TMEM106C-214ENST00000550161 XPCQ01831 940 aaPredicted RBP24.36■■□□□ 1.49
TMEM106C-214ENST00000550161 CCDC61Q9Y6R9 512 aa24.36■■□□□ 1.49
TMEM106C-214ENST00000550161 LRRC59Q96AG4 307 aaKnown RBP24.34■■□□□ 1.49
TMEM106C-214ENST00000550161 SHPRHQ149N8 1683 aa24.34■■□□□ 1.49
TMEM106C-214ENST00000550161 PLEKHG3A1L390 1219 aa24.33■■□□□ 1.49
TMEM106C-214ENST00000550161 KRT28Q7Z3Y7 464 aa24.33■■□□□ 1.49
TMEM106C-214ENST00000550161 PPIP5K1Q6PFW1 1433 aa24.32■■□□□ 1.48
TMEM106C-214ENST00000550161 PNPLA6Q8IY17 1366 aa24.3■■□□□ 1.48
TMEM106C-214ENST00000550161 NGDNQ8NEJ9 315 aaKnown RBP24.3■■□□□ 1.48
TMEM106C-214ENST00000550161 POLR3AO14802 1390 aaPredicted RBP24.29■■□□□ 1.48
TMEM106C-214ENST00000550161 PSME1Q06323 249 aa24.29■■□□□ 1.48
TMEM106C-214ENST00000550161 ATAD2Q6PL18 1390 aa24.29■■□□□ 1.48
TMEM106C-214ENST00000550161 CABP1Q9NZU7 370 aa24.28■■□□□ 1.48
TMEM106C-214ENST00000550161 ACEP12821 1306 aa24.28■■□□□ 1.48
TMEM106C-214ENST00000550161 TRPM3Q9HCF6 1732 aaPredicted RBP24.27■■□□□ 1.48
TMEM106C-214ENST00000550161 SLC24A1O60721 1099 aa24.27■■□□□ 1.48
TMEM106C-214ENST00000550161 PUS7Q96PZ0 661 aaKnown RBP24.27■■□□□ 1.48
TMEM106C-214ENST00000550161 SPATA31A3Q5VYP0 1347 aa24.27■■□□□ 1.48
TMEM106C-214ENST00000550161 SBNO1A3KN83 1393 aa24.27■■□□□ 1.48
TMEM106C-214ENST00000550161 DISP3Q9P2K9 1392 aa24.27■■□□□ 1.48
TMEM106C-214ENST00000550161 HSPA5P11021 654 aaKnown RBP24.26■■□□□ 1.47
TMEM106C-214ENST00000550161 EIF4G2P78344 907 aaKnown RBP eCLIP24.26■■□□□ 1.47
TMEM106C-214ENST00000550161 MED1Q15648 1581 aaPredicted RBP24.25■■□□□ 1.47
TMEM106C-214ENST00000550161 SPATA31A6Q5VVP1 1343 aa24.25■■□□□ 1.47
TMEM106C-214ENST00000550161 TNS3Q68CZ2 1445 aa24.25■■□□□ 1.47
TMEM106C-214ENST00000550161 COL22A1Q8NFW1 1626 aaPredicted RBP24.24■■□□□ 1.47
TMEM106C-214ENST00000550161 TMF1P82094 1093 aa24.23■■□□□ 1.47
TMEM106C-214ENST00000550161 LRP6O75581 1613 aa24.22■■□□□ 1.47
TMEM106C-214ENST00000550161 ALS2Q96Q42 1657 aa24.21■■□□□ 1.47
TMEM106C-214ENST00000550161 AKAP12Q02952 1782 aa24.19■■□□□ 1.46
TMEM106C-214ENST00000550161 CD163L1Q9NR16 1453 aa24.18■■□□□ 1.46
TMEM106C-214ENST00000550161 USP6P35125 1406 aa24.18■■□□□ 1.46
TMEM106C-214ENST00000550161 CPSF1Q10570 1443 aaKnown RBP24.18■■□□□ 1.46
TMEM106C-214ENST00000550161 NUTM2BA6NNL0 878 aaPredicted RBP24.17■■□□□ 1.46
TMEM106C-214ENST00000550161 NUTM2EB1AL46 878 aaPredicted RBP24.17■■□□□ 1.46
TMEM106C-214ENST00000550161 NUTM2AQ8IVF1 878 aaPredicted RBP24.17■■□□□ 1.46
TMEM106C-214ENST00000550161 SLC12A5Q9H2X9 1139 aa24.17■■□□□ 1.46
TMEM106C-214ENST00000550161 ARHGEF10O15013 1369 aa24.16■■□□□ 1.46
TMEM106C-214ENST00000550161 TMC1Q8TDI8 760 aa24.16■■□□□ 1.46
TMEM106C-214ENST00000550161 SSH2Q76I76 1423 aa24.16■■□□□ 1.46
TMEM106C-214ENST00000550161 PAK3O75914 559 aaPredicted RBP24.15■■□□□ 1.46
TMEM106C-214ENST00000550161 LMOD2Q6P5Q4 547 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms