RNA–Protein interactions for RNA: ENST00000549963.1

GPN3-206, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 497 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-206ENST00000549963 DLC1Q96QB1 1528 aa21.31■■□□□ 1
GPN3-206ENST00000549963 ROCK2O75116 1388 aaKnown RBP21.29■■□□□ 1
GPN3-206ENST00000549963 SAFB2Q14151 953 aaKnown RBP eCLIP21.29■■□□□ 1
GPN3-206ENST00000549963 NALCNQ8IZF0 1738 aa21.29■■□□□ 1
GPN3-206ENST00000549963 NBPF8Q3BBV2 869 aa21.28■■□□□ 1
GPN3-206ENST00000549963 TRPM1Q7Z4N2 1603 aa21.27■■□□□ 1
GPN3-206ENST00000549963 PLEKHH1Q9ULM0 1364 aa21.26■□□□□ 0.99
GPN3-206ENST00000549963 CARD11Q9BXL7 1154 aa21.23■□□□□ 0.99
GPN3-206ENST00000549963 ROBO1Q9Y6N7 1651 aa21.22■□□□□ 0.99
GPN3-206ENST00000549963 MINK1Q8N4C8 1332 aaPredicted RBP21.22■□□□□ 0.99
GPN3-206ENST00000549963 MST1RQ04912 1400 aa21.21■□□□□ 0.99
GPN3-206ENST00000549963 ARHGEF28Q8N1W1 1705 aaKnown RBP21.21■□□□□ 0.99
GPN3-206ENST00000549963 HSPA1LP34931 641 aa21.21■□□□□ 0.99
GPN3-206ENST00000549963 CDC42BPGQ6DT37 1551 aa21.21■□□□□ 0.99
GPN3-206ENST00000549963 EIF3AQ14152 1382 aaKnown RBP21.21■□□□□ 0.99
GPN3-206ENST00000549963 CENPJQ9HC77 1338 aaPredicted RBP21.2■□□□□ 0.98
GPN3-206ENST00000549963 HIRIP3Q9BW71 556 aaPredicted RBP21.19■□□□□ 0.98
GPN3-206ENST00000549963 ESCO1Q5FWF5 840 aa21.18■□□□□ 0.98
GPN3-206ENST00000549963 BRINP3Q76B58 766 aa21.18■□□□□ 0.98
GPN3-206ENST00000549963 GPRASP1Q5JY77 1395 aa21.18■□□□□ 0.98
GPN3-206ENST00000549963 C1orf167Q5SNV9 1468 aa21.18■□□□□ 0.98
GPN3-206ENST00000549963 RALGAPBQ86X10 1494 aa21.18■□□□□ 0.98
GPN3-206ENST00000549963 NUTM2FA1L443 756 aa21.17■□□□□ 0.98
GPN3-206ENST00000549963 WASLO00401 505 aaPredicted RBP21.17■□□□□ 0.98
GPN3-206ENST00000549963 FMN2Q9NZ56 1722 aa21.15■□□□□ 0.98
GPN3-206ENST00000549963 ORAI2Q96SN7 254 aa21.14■□□□□ 0.97
GPN3-206ENST00000549963 ADGRB2O60241 1585 aa21.13■□□□□ 0.97
GPN3-206ENST00000549963 PHLPP1O60346 1717 aa21.12■□□□□ 0.97
GPN3-206ENST00000549963 CDK19Q9BWU1 502 aa21.12■□□□□ 0.97
GPN3-206ENST00000549963 SLC24A1O60721 1099 aa21.11■□□□□ 0.97
GPN3-206ENST00000549963 QRICH2Q9H0J4 1663 aa21.1■□□□□ 0.97
GPN3-206ENST00000549963 ANKARQ7Z5J8 1434 aa21.1■□□□□ 0.97
GPN3-206ENST00000549963 EVC2Q86UK5 1308 aa21.09■□□□□ 0.97
GPN3-206ENST00000549963 SRPK2P78362 688 aaKnown RBP21.09■□□□□ 0.97
GPN3-206ENST00000549963 NPHP3Q7Z494 1330 aa21.08■□□□□ 0.97
GPN3-206ENST00000549963 RGPD8O14715 1765 aaPredicted RBP21.08■□□□□ 0.97
GPN3-206ENST00000549963 LRRC59Q96AG4 307 aaKnown RBP21.08■□□□□ 0.97
GPN3-206ENST00000549963 PHF8Q9UPP1 1060 aa21.08■□□□□ 0.97
GPN3-206ENST00000549963 AHDC1Q5TGY3 1603 aaPredicted RBP21.07■□□□□ 0.96
GPN3-206ENST00000549963 NUDT16Q96DE0 195 aaKnown RBP21.07■□□□□ 0.96
GPN3-206ENST00000549963 TULP4Q9NRJ4 1543 aa21.06■□□□□ 0.96
GPN3-206ENST00000549963 FOXO3O43524 673 aa21.06■□□□□ 0.96
GPN3-206ENST00000549963 NHSL1Q5SYE7 1610 aa21.04■□□□□ 0.96
GPN3-206ENST00000549963 PSME1Q06323 249 aa21.04■□□□□ 0.96
GPN3-206ENST00000549963 DDX17Q92841 729 aaKnown RBP21.04■□□□□ 0.96
GPN3-206ENST00000549963 CCDC61Q9Y6R9 512 aa21.04■□□□□ 0.96
GPN3-206ENST00000549963 KIF1AQ12756 1690 aa21.04■□□□□ 0.96
GPN3-206ENST00000549963 JCADQ9P266 1359 aa21.02■□□□□ 0.96
GPN3-206ENST00000549963 ST20-MTHFSA0A0A6YYL1 179 aa21.02■□□□□ 0.96
GPN3-206ENST00000549963 NGDNQ8NEJ9 315 aaKnown RBP21.02■□□□□ 0.96
GPN3-206ENST00000549963 PMFBP1Q8TBY8 1022 aa21.02■□□□□ 0.96
GPN3-206ENST00000549963 CABP2Q9NPB3 220 aa21.02■□□□□ 0.96
GPN3-206ENST00000549963 ITSN1Q15811 1721 aa21.01■□□□□ 0.95
GPN3-206ENST00000549963 SBNO2Q9Y2G9 1366 aa21.01■□□□□ 0.95
GPN3-206ENST00000549963 SOS2Q07890 1332 aaPredicted RBP21.01■□□□□ 0.95
GPN3-206ENST00000549963 COL16A1Q07092 1604 aaPredicted RBP21■□□□□ 0.95
GPN3-206ENST00000549963 USP47Q96K76 1375 aa21■□□□□ 0.95
GPN3-206ENST00000549963 KRT28Q7Z3Y7 464 aa21■□□□□ 0.95
GPN3-206ENST00000549963 PRR36Q9H6K5 1346 aa21■□□□□ 0.95
GPN3-206ENST00000549963 USP32Q8NFA0 1604 aa21■□□□□ 0.95
GPN3-206ENST00000549963 XPCQ01831 940 aaPredicted RBP20.97■□□□□ 0.95
GPN3-206ENST00000549963 ATP7BP35670 1465 aa20.96■□□□□ 0.95
GPN3-206ENST00000549963 PLEKHG3A1L390 1219 aa20.96■□□□□ 0.95
GPN3-206ENST00000549963 EIF4G2P78344 907 aaKnown RBP eCLIP20.96■□□□□ 0.95
GPN3-206ENST00000549963 SPATA31A6Q5VVP1 1343 aa20.96■□□□□ 0.95
GPN3-206ENST00000549963 TMF1P82094 1093 aa20.95■□□□□ 0.94
GPN3-206ENST00000549963 CDCA8Q53HL2 280 aa20.94■□□□□ 0.94
GPN3-206ENST00000549963 PUS7Q96PZ0 661 aaKnown RBP20.94■□□□□ 0.94
GPN3-206ENST00000549963 ATAD2Q6PL18 1390 aa20.94■□□□□ 0.94
GPN3-206ENST00000549963 CABP1Q9NZU7 370 aa20.93■□□□□ 0.94
GPN3-206ENST00000549963 PPIP5K1Q6PFW1 1433 aa20.93■□□□□ 0.94
GPN3-206ENST00000549963 SHPRHQ149N8 1683 aa20.93■□□□□ 0.94
GPN3-206ENST00000549963 LMOD2Q6P5Q4 547 aa20.92■□□□□ 0.94
GPN3-206ENST00000549963 TESK2Q96S53 571 aa20.92■□□□□ 0.94
GPN3-206ENST00000549963 ACEP12821 1306 aa20.92■□□□□ 0.94
GPN3-206ENST00000549963 PXDNQ92626 1479 aa20.92■□□□□ 0.94
GPN3-206ENST00000549963 PAK3O75914 559 aaPredicted RBP20.91■□□□□ 0.94
GPN3-206ENST00000549963 SBNO1A3KN83 1393 aa20.9■□□□□ 0.94
GPN3-206ENST00000549963 SPATA31A3Q5VYP0 1347 aa20.9■□□□□ 0.94
GPN3-206ENST00000549963 ZNF692Q9BU19 519 aaPredicted RBP20.9■□□□□ 0.94
GPN3-206ENST00000549963 TOPAZ1Q8N9V7 1692 aa20.89■□□□□ 0.94
GPN3-206ENST00000549963 NUTM2BA6NNL0 878 aaPredicted RBP20.89■□□□□ 0.93
GPN3-206ENST00000549963 NUTM2EB1AL46 878 aaPredicted RBP20.89■□□□□ 0.93
GPN3-206ENST00000549963 MEX3CQ5U5Q3 659 aaKnown RBP20.89■□□□□ 0.93
GPN3-206ENST00000549963 NUTM2AQ8IVF1 878 aaPredicted RBP20.89■□□□□ 0.93
GPN3-206ENST00000549963 TMC1Q8TDI8 760 aa20.89■□□□□ 0.93
GPN3-206ENST00000549963 POLR3AO14802 1390 aaPredicted RBP20.88■□□□□ 0.93
GPN3-206ENST00000549963 PNPLA6Q8IY17 1366 aa20.88■□□□□ 0.93
GPN3-206ENST00000549963 ARHGEF10O15013 1369 aa20.87■□□□□ 0.93
GPN3-206ENST00000549963 PHF23Q9BUL5 403 aaPredicted RBP20.87■□□□□ 0.93
GPN3-206ENST00000549963 HSPA5P11021 654 aaKnown RBP20.86■□□□□ 0.93
GPN3-206ENST00000549963 HAP1P54257 671 aaPredicted RBP20.85■□□□□ 0.93
GPN3-206ENST00000549963 TNS3Q68CZ2 1445 aa20.85■□□□□ 0.93
GPN3-206ENST00000549963 BRD4O60885 1362 aaPredicted RBP20.85■□□□□ 0.93
GPN3-206ENST00000549963 HDGFL2Q7Z4V5 671 aaPredicted RBP20.84■□□□□ 0.93
GPN3-206ENST00000549963 TERF2IPQ9NYB0 399 aa20.84■□□□□ 0.93
GPN3-206ENST00000549963 MED1Q15648 1581 aaPredicted RBP20.84■□□□□ 0.93
GPN3-206ENST00000549963 DISP3Q9P2K9 1392 aa20.83■□□□□ 0.92
GPN3-206ENST00000549963 NINLQ9Y2I6 1382 aa20.82■□□□□ 0.92
GPN3-206ENST00000549963 ABTB2Q8N961 1025 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms