RNA–Protein interactions for RNA: ENST00000549917.1

PPFIA2-217, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 4

Gene PPFIA2, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-217ENST00000549917 GOPCQ9HD26 462 aa11.44□□□□□ -0.58
PPFIA2-217ENST00000549917 BRICD5Q6PL45 260 aa11.43□□□□□ -0.58
PPFIA2-217ENST00000549917 QPCTQ16769 361 aa11.42□□□□□ -0.58
PPFIA2-217ENST00000549917 TUSC1Q2TAM9 212 aa11.42□□□□□ -0.58
PPFIA2-217ENST00000549917 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.42□□□□□ -0.58
PPFIA2-217ENST00000549917 SALL2Q9Y467 1007 aaPredicted RBP11.42□□□□□ -0.58
PPFIA2-217ENST00000549917 KCNC4Q03721 635 aa11.41□□□□□ -0.58
PPFIA2-217ENST00000549917 CSPP1Q1MSJ5 1256 aa11.39□□□□□ -0.59
PPFIA2-217ENST00000549917 FAM160A2Q8N612 972 aaPredicted RBP11.39□□□□□ -0.59
PPFIA2-217ENST00000549917 CABLES1Q8TDN4 633 aa11.39□□□□□ -0.59
PPFIA2-217ENST00000549917 PLA2G2EQ9NZK7 142 aa11.39□□□□□ -0.59
PPFIA2-217ENST00000549917 HRCP23327 699 aa11.38□□□□□ -0.59
PPFIA2-217ENST00000549917 IFFO2Q5TF58 517 aa11.38□□□□□ -0.59
PPFIA2-217ENST00000549917 LILRB3O75022 631 aa11.37□□□□□ -0.59
PPFIA2-217ENST00000549917 FMNL1O95466 1100 aaPredicted RBP11.37□□□□□ -0.59
PPFIA2-217ENST00000549917 ADH1BP00325 375 aa11.37□□□□□ -0.59
PPFIA2-217ENST00000549917 Q3C1V9 767 aa11.37□□□□□ -0.59
PPFIA2-217ENST00000549917 SPSB2Q99619 263 aa11.37□□□□□ -0.59
PPFIA2-217ENST00000549917 TMEM132AQ24JP5 1023 aa11.36□□□□□ -0.59
PPFIA2-217ENST00000549917 C6orf229H3BNL8 230 aa11.35□□□□□ -0.59
PPFIA2-217ENST00000549917 MTMR2Q13614 643 aa11.35□□□□□ -0.59
PPFIA2-217ENST00000549917 RTL5Q5HYW3 569 aaPredicted RBP11.35□□□□□ -0.59
PPFIA2-217ENST00000549917 PRPF38BQ5VTL8 546 aaKnown RBP11.35□□□□□ -0.59
PPFIA2-217ENST00000549917 PRDM9Q9NQV7 894 aa11.35□□□□□ -0.59
PPFIA2-217ENST00000549917 RETREG3Q86VR2 466 aa11.34□□□□□ -0.59
PPFIA2-217ENST00000549917 USB1Q9BQ65 265 aaKnown RBP11.34□□□□□ -0.59
PPFIA2-217ENST00000549917 ZBTB3Q9H5J0 574 aa11.34□□□□□ -0.59
PPFIA2-217ENST00000549917 CFAP99D6REC4 459 aa11.33□□□□□ -0.6
PPFIA2-217ENST00000549917 PCMTD1Q96MG8 357 aaPredicted RBP11.33□□□□□ -0.6
PPFIA2-217ENST00000549917 MSS51Q4VC12 460 aa11.32□□□□□ -0.6
PPFIA2-217ENST00000549917 PPP2R2DQ66LE6 453 aa11.32□□□□□ -0.6
PPFIA2-217ENST00000549917 S1PR4O95977 384 aa11.31□□□□□ -0.6
PPFIA2-217ENST00000549917 PRR7Q8TB68 274 aa11.3□□□□□ -0.6
PPFIA2-217ENST00000549917 SPDYE5A6NIY4 337 aa11.29□□□□□ -0.6
PPFIA2-217ENST00000549917 MMP16P51512 607 aa11.29□□□□□ -0.6
PPFIA2-217ENST00000549917 SLC6A16Q9GZN6 736 aa11.29□□□□□ -0.6
PPFIA2-217ENST00000549917 DXOO77932 396 aaKnown RBP11.28□□□□□ -0.6
PPFIA2-217ENST00000549917 PPP1R18Q6NYC8 613 aa11.28□□□□□ -0.6
PPFIA2-217ENST00000549917 A0A0G2JS52 829 aa11.27□□□□□ -0.61
PPFIA2-217ENST00000549917 NUTM2BA6NNL0 878 aaPredicted RBP11.27□□□□□ -0.61
PPFIA2-217ENST00000549917 NUTM2EB1AL46 878 aaPredicted RBP11.27□□□□□ -0.61
PPFIA2-217ENST00000549917 NUTM2DQ5VT03 806 aaPredicted RBP11.27□□□□□ -0.61
PPFIA2-217ENST00000549917 NUTM2AQ8IVF1 878 aaPredicted RBP11.27□□□□□ -0.61
PPFIA2-217ENST00000549917 RNF223E7ERA6 249 aa11.26□□□□□ -0.61
PPFIA2-217ENST00000549917 PPEF1O14829 653 aaPredicted RBP11.26□□□□□ -0.61
PPFIA2-217ENST00000549917 RFC5P40937 340 aa11.26□□□□□ -0.61
PPFIA2-217ENST00000549917 JUNDP17535 347 aa11.25□□□□□ -0.61
PPFIA2-217ENST00000549917 DESI1Q6ICB0 168 aa11.24□□□□□ -0.61
PPFIA2-217ENST00000549917 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.24□□□□□ -0.61
PPFIA2-217ENST00000549917 ATP1B4Q9UN42 357 aaPredicted RBP11.24□□□□□ -0.61
PPFIA2-217ENST00000549917 PER1O15534 1290 aaPredicted RBP11.23□□□□□ -0.61
PPFIA2-217ENST00000549917 PLA2G2CQ5R387 149 aa11.22□□□□□ -0.61
PPFIA2-217ENST00000549917 EMID1Q96A84 441 aaPredicted RBP11.21□□□□□ -0.61
PPFIA2-217ENST00000549917 CTDSPL2Q05D32 466 aa11.2□□□□□ -0.62
PPFIA2-217ENST00000549917 LYPD8Q6UX82 237 aa11.2□□□□□ -0.62
PPFIA2-217ENST00000549917 FCF1Q9Y324 198 aaKnown RBP11.2□□□□□ -0.62
PPFIA2-217ENST00000549917 TSC1Q92574 1164 aa11.19□□□□□ -0.62
PPFIA2-217ENST00000549917 PTPRNQ16849 979 aa11.18□□□□□ -0.62
PPFIA2-217ENST00000549917 ANKLE1Q8NAG6 615 aa11.18□□□□□ -0.62
PPFIA2-217ENST00000549917 AP1G2O75843 785 aa11.17□□□□□ -0.62
PPFIA2-217ENST00000549917 F12P00748 615 aaPredicted RBP11.16□□□□□ -0.62
PPFIA2-217ENST00000549917 USP17L8P0C7I0 530 aa11.16□□□□□ -0.62
PPFIA2-217ENST00000549917 GGCXP38435 758 aa11.16□□□□□ -0.62
PPFIA2-217ENST00000549917 HELBQ8NG08 1087 aaPredicted RBP11.16□□□□□ -0.62
PPFIA2-217ENST00000549917 LRRN4Q8WUT4 740 aa11.16□□□□□ -0.62
PPFIA2-217ENST00000549917 NUDT12Q9BQG2 462 aa11.16□□□□□ -0.62
PPFIA2-217ENST00000549917 CCNYL3P0C7X3 344 aa11.14□□□□□ -0.63
PPFIA2-217ENST00000549917 TMEM259Q4ZIN3 620 aa11.14□□□□□ -0.63
PPFIA2-217ENST00000549917 PTCRAQ6ISU1 281 aaPredicted RBP11.14□□□□□ -0.63
PPFIA2-217ENST00000549917 HMX1Q9NP08 348 aaPredicted RBP11.14□□□□□ -0.63
PPFIA2-217ENST00000549917 MAP10Q9P2G4 905 aa11.13□□□□□ -0.63
PPFIA2-217ENST00000549917 LIAT1Q6ZQX7 453 aa11.12□□□□□ -0.63
PPFIA2-217ENST00000549917 EVA1BQ9NVM1 165 aa11.12□□□□□ -0.63
PPFIA2-217ENST00000549917 SNRKQ9NRH2 765 aa11.11□□□□□ -0.63
PPFIA2-217ENST00000549917 CCDC24Q8N4L8 307 aa11.1□□□□□ -0.63
PPFIA2-217ENST00000549917 BANK1Q8NDB2 785 aa11.1□□□□□ -0.63
PPFIA2-217ENST00000549917 KCNH2Q12809 1159 aa11.09□□□□□ -0.63
PPFIA2-217ENST00000549917 MTMR14Q8NCE2 650 aa11.09□□□□□ -0.63
PPFIA2-217ENST00000549917 EPS8L1Q8TE68 723 aa11.09□□□□□ -0.63
PPFIA2-217ENST00000549917 GJD4Q96KN9 370 aaPredicted RBP11.09□□□□□ -0.63
PPFIA2-217ENST00000549917 TRIM34Q9BYJ4 488 aa11.09□□□□□ -0.63
PPFIA2-217ENST00000549917 MCM6Q14566 821 aa11.06□□□□□ -0.64
PPFIA2-217ENST00000549917 PRKD2Q9BZL6 878 aa11.06□□□□□ -0.64
PPFIA2-217ENST00000549917 UNC93B1Q9H1C4 597 aa11.06□□□□□ -0.64
PPFIA2-217ENST00000549917 NR6A1Q15406 480 aa11.05□□□□□ -0.64
PPFIA2-217ENST00000549917 GPR37L1O60883 481 aa11.04□□□□□ -0.64
PPFIA2-217ENST00000549917 CTHP32929 405 aa11.04□□□□□ -0.64
PPFIA2-217ENST00000549917 SLC19A1P41440 591 aa11.04□□□□□ -0.64
PPFIA2-217ENST00000549917 RPIAP49247 311 aa11.04□□□□□ -0.64
PPFIA2-217ENST00000549917 SOCS7O14512 581 aa11.03□□□□□ -0.64
PPFIA2-217ENST00000549917 SKOR1P84550 965 aa11.02□□□□□ -0.65
PPFIA2-217ENST00000549917 TRIM32Q13049 653 aa11.02□□□□□ -0.65
PPFIA2-217ENST00000549917 SPRYD7Q5W111 196 aa11.02□□□□□ -0.65
PPFIA2-217ENST00000549917 V9GY48 417 aaPredicted RBP11.02□□□□□ -0.65
PPFIA2-217ENST00000549917 RGS20O76081 388 aa11□□□□□ -0.65
PPFIA2-217ENST00000549917 BAP1Q92560 729 aa10.99□□□□□ -0.65
PPFIA2-217ENST00000549917 ZBTB24O43167 697 aaPredicted RBP10.98□□□□□ -0.65
PPFIA2-217ENST00000549917 LINC01559Q495D7 138 aa10.98□□□□□ -0.65
PPFIA2-217ENST00000549917 SH3BP2P78314 561 aa10.97□□□□□ -0.65
PPFIA2-217ENST00000549917 FKBPLQ9UIM3 349 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms