RNA–Protein interactions for RNA: ENST00000549915.5

RAB5B-207, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 494 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-207ENST00000549915 ANKLE1Q8NAG6 615 aa5.56□□□□□ -1.52
RAB5B-207ENST00000549915 SPSB2Q99619 263 aa5.56□□□□□ -1.52
RAB5B-207ENST00000549915 TOP2AP11388 1531 aaKnown RBP5.56□□□□□ -1.52
RAB5B-207ENST00000549915 TRIM66O15016 1216 aa5.55□□□□□ -1.52
RAB5B-207ENST00000549915 SSTR3P32745 418 aaPredicted RBP5.55□□□□□ -1.52
RAB5B-207ENST00000549915 GJA5P36382 358 aa5.55□□□□□ -1.52
RAB5B-207ENST00000549915 MSS51Q4VC12 460 aa5.55□□□□□ -1.52
RAB5B-207ENST00000549915 GIGYF2Q6Y7W6 1299 aaKnown RBP5.55□□□□□ -1.52
RAB5B-207ENST00000549915 NLRP7Q8WX94 980 aa5.55□□□□□ -1.52
RAB5B-207ENST00000549915 GOLGA3Q08378 1498 aa5.55□□□□□ -1.52
RAB5B-207ENST00000549915 WIZO95785 1651 aa5.55□□□□□ -1.52
RAB5B-207ENST00000549915 HOXA2O43364 376 aa5.54□□□□□ -1.52
RAB5B-207ENST00000549915 CECR2Q9BXF3 1484 aa5.53□□□□□ -1.52
RAB5B-207ENST00000549915 SPDYE5A6NIY4 337 aa5.53□□□□□ -1.52
RAB5B-207ENST00000549915 PUS10Q3MIT2 529 aaKnown RBP5.53□□□□□ -1.52
RAB5B-207ENST00000549915 IRX2Q9BZI1 471 aaPredicted RBP5.53□□□□□ -1.52
RAB5B-207ENST00000549915 SLC27A5Q9Y2P5 690 aa5.53□□□□□ -1.52
RAB5B-207ENST00000549915 KIF21BO75037 1637 aa5.52□□□□□ -1.53
RAB5B-207ENST00000549915 TLL1O43897 1013 aa5.52□□□□□ -1.53
RAB5B-207ENST00000549915 PDE4DQ08499 809 aa5.52□□□□□ -1.53
RAB5B-207ENST00000549915 BRICD5Q6PL45 260 aa5.52□□□□□ -1.53
RAB5B-207ENST00000549915 PARP9Q8IXQ6 854 aa5.52□□□□□ -1.53
RAB5B-207ENST00000549915 NKX2-3Q8TAU0 364 aa5.52□□□□□ -1.53
RAB5B-207ENST00000549915 THAP11Q96EK4 314 aa5.52□□□□□ -1.53
RAB5B-207ENST00000549915 BAZ1BQ9UIG0 1483 aaKnown RBP5.51□□□□□ -1.53
RAB5B-207ENST00000549915 RNF223E7ERA6 249 aa5.51□□□□□ -1.53
RAB5B-207ENST00000549915 S1PR4O95977 384 aa5.51□□□□□ -1.53
RAB5B-207ENST00000549915 USB1Q9BQ65 265 aaKnown RBP5.51□□□□□ -1.53
RAB5B-207ENST00000549915 BEGAINQ9BUH8 593 aa5.51□□□□□ -1.53
RAB5B-207ENST00000549915 PRKD2Q9BZL6 878 aa5.51□□□□□ -1.53
RAB5B-207ENST00000549915 RSPH6AQ9H0K4 717 aa5.51□□□□□ -1.53
RAB5B-207ENST00000549915 CEP164Q9UPV0 1460 aa5.51□□□□□ -1.53
RAB5B-207ENST00000549915 SMARCA2P51531 1590 aa5.5□□□□□ -1.53
RAB5B-207ENST00000549915 FDX1P10109 184 aa5.5□□□□□ -1.53
RAB5B-207ENST00000549915 RPIAP49247 311 aa5.5□□□□□ -1.53
RAB5B-207ENST00000549915 RETREG3Q86VR2 466 aa5.5□□□□□ -1.53
RAB5B-207ENST00000549915 SLC24A3Q9HC58 644 aa5.5□□□□□ -1.53
RAB5B-207ENST00000549915 CCDC88BA6NC98 1476 aa5.5□□□□□ -1.53
RAB5B-207ENST00000549915 ZBTB24O43167 697 aaPredicted RBP5.49□□□□□ -1.53
RAB5B-207ENST00000549915 SLC19A1P41440 591 aa5.49□□□□□ -1.53
RAB5B-207ENST00000549915 MMP16P51512 607 aa5.49□□□□□ -1.53
RAB5B-207ENST00000549915 SPIRE2Q8WWL2 714 aa5.49□□□□□ -1.53
RAB5B-207ENST00000549915 VPS8Q8N3P4 1428 aa5.48□□□□□ -1.53
RAB5B-207ENST00000549915 TUSC1Q2TAM9 212 aa5.48□□□□□ -1.53
RAB5B-207ENST00000549915 PRPF38BQ5VTL8 546 aaKnown RBP5.48□□□□□ -1.53
RAB5B-207ENST00000549915 DDRGK1Q96HY6 314 aa5.48□□□□□ -1.53
RAB5B-207ENST00000549915 REPIN1Q9BWE0 567 aaKnown RBP5.48□□□□□ -1.53
RAB5B-207ENST00000549915 SMARCA4P51532 1647 aa5.48□□□□□ -1.53
RAB5B-207ENST00000549915 ABCC8Q09428 1581 aa5.47□□□□□ -1.53
RAB5B-207ENST00000549915 DXOO77932 396 aaKnown RBP5.47□□□□□ -1.53
RAB5B-207ENST00000549915 CD2BP2O95400 341 aaKnown RBP5.47□□□□□ -1.53
RAB5B-207ENST00000549915 MTMR2Q13614 643 aa5.47□□□□□ -1.53
RAB5B-207ENST00000549915 DESI1Q6ICB0 168 aa5.47□□□□□ -1.53
RAB5B-207ENST00000549915 RNF19BQ6ZMZ0 732 aa5.47□□□□□ -1.53
RAB5B-207ENST00000549915 ZNF598Q86UK7 904 aaKnown RBP5.47□□□□□ -1.53
RAB5B-207ENST00000549915 TBC1D2Q9BYX2 928 aa5.47□□□□□ -1.53
RAB5B-207ENST00000549915 C6orf229H3BNL8 230 aa5.46□□□□□ -1.54
RAB5B-207ENST00000549915 NRG2O14511 850 aaPredicted RBP5.46□□□□□ -1.54
RAB5B-207ENST00000549915 JUNDP17535 347 aa5.46□□□□□ -1.54
RAB5B-207ENST00000549915 SPRYD7Q5W111 196 aa5.46□□□□□ -1.54
RAB5B-207ENST00000549915 YTHDC1Q96MU7 727 aaKnown RBP5.46□□□□□ -1.54
RAB5B-207ENST00000549915 ANP32EQ9BTT0 268 aa5.46□□□□□ -1.54
RAB5B-207ENST00000549915 ZBTB3Q9H5J0 574 aa5.46□□□□□ -1.54
RAB5B-207ENST00000549915 FCF1Q9Y324 198 aaKnown RBP5.46□□□□□ -1.54
RAB5B-207ENST00000549915 SOGA1O94964 1423 aa5.46□□□□□ -1.54
RAB5B-207ENST00000549915 SPTLC1O15269 473 aa5.45□□□□□ -1.54
RAB5B-207ENST00000549915 MS4A1P11836 297 aa5.45□□□□□ -1.54
RAB5B-207ENST00000549915 PRR20EP86478 221 aa5.45□□□□□ -1.54
RAB5B-207ENST00000549915 PRR20CP86479 221 aa5.45□□□□□ -1.54
RAB5B-207ENST00000549915 PRR20DP86480 221 aa5.45□□□□□ -1.54
RAB5B-207ENST00000549915 PRR20BP86481 221 aa5.45□□□□□ -1.54
RAB5B-207ENST00000549915 PRR20AP86496 221 aa5.45□□□□□ -1.54
RAB5B-207ENST00000549915 RSBN1LQ6PCB5 846 aaPredicted RBP5.45□□□□□ -1.54
RAB5B-207ENST00000549915 FAM160A2Q8N612 972 aaPredicted RBP5.45□□□□□ -1.54
RAB5B-207ENST00000549915 SUPT16HQ9Y5B9 1047 aaKnown RBP5.45□□□□□ -1.54
RAB5B-207ENST00000549915 CLIP1P30622 1438 aa5.45□□□□□ -1.54
RAB5B-207ENST00000549915 CUX2O14529 1486 aa5.45□□□□□ -1.54
RAB5B-207ENST00000549915 MOXD2PA6NHM9 499 aa5.44□□□□□ -1.54
RAB5B-207ENST00000549915 PTPRNQ16849 979 aa5.44□□□□□ -1.54
RAB5B-207ENST00000549915 PEG3Q9GZU2 1588 aa5.43□□□□□ -1.54
RAB5B-207ENST00000549915 ZNF697Q5TEC3 545 aa5.43□□□□□ -1.54
RAB5B-207ENST00000549915 RIC3Q7Z5B4 369 aa5.43□□□□□ -1.54
RAB5B-207ENST00000549915 PDZRN3Q9UPQ7 1066 aa5.43□□□□□ -1.54
RAB5B-207ENST00000549915 PPEF1O14829 653 aaPredicted RBP5.42□□□□□ -1.54
RAB5B-207ENST00000549915 GFRA3O60609 400 aa5.42□□□□□ -1.54
RAB5B-207ENST00000549915 CCNYL3P0C7X3 344 aa5.42□□□□□ -1.54
RAB5B-207ENST00000549915 CLK2P49760 499 aaKnown RBP5.42□□□□□ -1.54
RAB5B-207ENST00000549915 WNT7BP56706 349 aa5.42□□□□□ -1.54
RAB5B-207ENST00000549915 HELBQ8NG08 1087 aaPredicted RBP5.42□□□□□ -1.54
RAB5B-207ENST00000549915 NUDT12Q9BQG2 462 aa5.42□□□□□ -1.54
RAB5B-207ENST00000549915 KDM4CQ9H3R0 1056 aa5.42□□□□□ -1.54
RAB5B-207ENST00000549915 UBTFP17480 764 aaKnown RBP5.41□□□□□ -1.54
RAB5B-207ENST00000549915 GUCA2AQ02747 115 aa5.41□□□□□ -1.54
RAB5B-207ENST00000549915 TRIM32Q13049 653 aa5.41□□□□□ -1.54
RAB5B-207ENST00000549915 SH3D19Q5HYK7 790 aa5.41□□□□□ -1.54
RAB5B-207ENST00000549915 MYSM1Q5VVJ2 828 aa5.41□□□□□ -1.54
RAB5B-207ENST00000549915 PRR7Q8TB68 274 aa5.41□□□□□ -1.54
RAB5B-207ENST00000549915 PRDM9Q9NQV7 894 aa5.41□□□□□ -1.54
RAB5B-207ENST00000549915 PCDHGC3Q9UN70 934 aa5.41□□□□□ -1.54
RAB5B-207ENST00000549915 ERICH3Q5RHP9 1530 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 259.2 ms