RNA–Protein interactions for RNA: ENST00000549842.1

CPNE8-206, Transcript of copine 8, humanhuman

TSL 2

Gene CPNE8, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-206ENST00000549842 SPSB2Q99619 263 aa8.31□□□□□ -1.08
CPNE8-206ENST00000549842 MYSM1Q5VVJ2 828 aa8.3□□□□□ -1.08
CPNE8-206ENST00000549842 GOPCQ9HD26 462 aa8.3□□□□□ -1.08
CPNE8-206ENST00000549842 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.3□□□□□ -1.08
CPNE8-206ENST00000549842 PLEKHG3A1L390 1219 aa8.29□□□□□ -1.08
CPNE8-206ENST00000549842 SPDYE5A6NIY4 337 aa8.29□□□□□ -1.08
CPNE8-206ENST00000549842 SH3D19Q5HYK7 790 aa8.29□□□□□ -1.08
CPNE8-206ENST00000549842 RIC3Q7Z5B4 369 aa8.29□□□□□ -1.08
CPNE8-206ENST00000549842 PCDHGC3Q9UN70 934 aa8.29□□□□□ -1.08
CPNE8-206ENST00000549842 TLL1O43897 1013 aa8.28□□□□□ -1.08
CPNE8-206ENST00000549842 NDUFV2P19404 249 aa8.28□□□□□ -1.08
CPNE8-206ENST00000549842 SKIV2LQ15477 1246 aaKnown RBP8.28□□□□□ -1.08
CPNE8-206ENST00000549842 PRPF38BQ5VTL8 546 aaKnown RBP8.28□□□□□ -1.08
CPNE8-206ENST00000549842 PPP1R18Q6NYC8 613 aa8.28□□□□□ -1.08
CPNE8-206ENST00000549842 RNF19BQ6ZMZ0 732 aa8.28□□□□□ -1.08
CPNE8-206ENST00000549842 HLA-CQ95604 372 aa8.28□□□□□ -1.08
CPNE8-206ENST00000549842 USB1Q9BQ65 265 aaKnown RBP8.28□□□□□ -1.08
CPNE8-206ENST00000549842 SLC6A16Q9GZN6 736 aa8.28□□□□□ -1.08
CPNE8-206ENST00000549842 RETREG3Q86VR2 466 aa8.27□□□□□ -1.09
CPNE8-206ENST00000549842 HOMEZQ8IX15 550 aa8.27□□□□□ -1.09
CPNE8-206ENST00000549842 FAM160A2Q8N612 972 aaPredicted RBP8.27□□□□□ -1.09
CPNE8-206ENST00000549842 MMP16P51512 607 aa8.26□□□□□ -1.09
CPNE8-206ENST00000549842 GUCA2AQ02747 115 aa8.26□□□□□ -1.09
CPNE8-206ENST00000549842 ANKLE1Q8NAG6 615 aa8.25□□□□□ -1.09
CPNE8-206ENST00000549842 S1PR4O95977 384 aa8.24□□□□□ -1.09
CPNE8-206ENST00000549842 CLK2P49760 499 aaKnown RBP8.24□□□□□ -1.09
CPNE8-206ENST00000549842 MTMR2Q13614 643 aa8.24□□□□□ -1.09
CPNE8-206ENST00000549842 DESI1Q6ICB0 168 aa8.24□□□□□ -1.09
CPNE8-206ENST00000549842 LIMD1Q9UGP4 676 aa8.24□□□□□ -1.09
CPNE8-206ENST00000549842 PCDHB15Q9Y5E8 787 aa8.24□□□□□ -1.09
CPNE8-206ENST00000549842 RNF223E7ERA6 249 aa8.23□□□□□ -1.09
CPNE8-206ENST00000549842 LILRB3O75022 631 aa8.23□□□□□ -1.09
CPNE8-206ENST00000549842 DXOO77932 396 aaKnown RBP8.23□□□□□ -1.09
CPNE8-206ENST00000549842 ZBTB3Q9H5J0 574 aa8.23□□□□□ -1.09
CPNE8-206ENST00000549842 C6orf229H3BNL8 230 aa8.22□□□□□ -1.09
CPNE8-206ENST00000549842 HRCP23327 699 aa8.22□□□□□ -1.09
CPNE8-206ENST00000549842 IL27Q8NEV9 243 aa8.21□□□□□ -1.1
CPNE8-206ENST00000549842 SYMPKQ92797 1274 aaKnown RBP8.21□□□□□ -1.1
CPNE8-206ENST00000549842 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.21□□□□□ -1.1
CPNE8-206ENST00000549842 POLR3EQ9NVU0 708 aa8.21□□□□□ -1.1
CPNE8-206ENST00000549842 V9GY48 417 aaPredicted RBP8.21□□□□□ -1.1
CPNE8-206ENST00000549842 JUNDP17535 347 aa8.2□□□□□ -1.1
CPNE8-206ENST00000549842 PPP2R2DQ66LE6 453 aa8.2□□□□□ -1.1
CPNE8-206ENST00000549842 PRR7Q8TB68 274 aa8.19□□□□□ -1.1
CPNE8-206ENST00000549842 SUPT5HO00267 1087 aaKnown RBP8.17□□□□□ -1.1
CPNE8-206ENST00000549842 QPCTQ16769 361 aa8.17□□□□□ -1.1
CPNE8-206ENST00000549842 PROCA1Q8NCQ7 364 aaPredicted RBP8.17□□□□□ -1.1
CPNE8-206ENST00000549842 PCMTD1Q96MG8 357 aaPredicted RBP8.17□□□□□ -1.1
CPNE8-206ENST00000549842 PRDM9Q9NQV7 894 aa8.17□□□□□ -1.1
CPNE8-206ENST00000549842 PPEF1O14829 653 aaPredicted RBP8.16□□□□□ -1.1
CPNE8-206ENST00000549842 RPIAP49247 311 aa8.16□□□□□ -1.1
CPNE8-206ENST00000549842 PTPRNQ16849 979 aa8.16□□□□□ -1.1
CPNE8-206ENST00000549842 CABLES1Q8TDN4 633 aa8.16□□□□□ -1.1
CPNE8-206ENST00000549842 FCF1Q9Y324 198 aaKnown RBP8.16□□□□□ -1.1
CPNE8-206ENST00000549842 NUTM2BA6NNL0 878 aaPredicted RBP8.15□□□□□ -1.1
CPNE8-206ENST00000549842 NUTM2EB1AL46 878 aaPredicted RBP8.15□□□□□ -1.1
CPNE8-206ENST00000549842 CFAP99D6REC4 459 aa8.15□□□□□ -1.1
CPNE8-206ENST00000549842 CSPP1Q1MSJ5 1256 aa8.15□□□□□ -1.1
CPNE8-206ENST00000549842 RTL5Q5HYW3 569 aaPredicted RBP8.15□□□□□ -1.1
CPNE8-206ENST00000549842 NUTM2DQ5VT03 806 aaPredicted RBP8.15□□□□□ -1.1
CPNE8-206ENST00000549842 LYPD8Q6UX82 237 aa8.15□□□□□ -1.1
CPNE8-206ENST00000549842 NUTM2AQ8IVF1 878 aaPredicted RBP8.15□□□□□ -1.1
CPNE8-206ENST00000549842 PRKD2Q9BZL6 878 aa8.15□□□□□ -1.1
CPNE8-206ENST00000549842 SLC19A1P41440 591 aa8.14□□□□□ -1.11
CPNE8-206ENST00000549842 EMID1Q96A84 441 aaPredicted RBP8.14□□□□□ -1.11
CPNE8-206ENST00000549842 EVA1BQ9NVM1 165 aa8.14□□□□□ -1.11
CPNE8-206ENST00000549842 LIAT1Q6ZQX7 453 aa8.13□□□□□ -1.11
CPNE8-206ENST00000549842 CCNYL3P0C7X3 344 aa8.12□□□□□ -1.11
CPNE8-206ENST00000549842 PLA2G2CQ5R387 149 aa8.12□□□□□ -1.11
CPNE8-206ENST00000549842 NUDT12Q9BQG2 462 aa8.12□□□□□ -1.11
CPNE8-206ENST00000549842 CD2BP2O95400 341 aaKnown RBP8.11□□□□□ -1.11
CPNE8-206ENST00000549842 SPRYD7Q5W111 196 aa8.11□□□□□ -1.11
CPNE8-206ENST00000549842 HELBQ8NG08 1087 aaPredicted RBP8.11□□□□□ -1.11
CPNE8-206ENST00000549842 TMEM259Q4ZIN3 620 aa8.1□□□□□ -1.11
CPNE8-206ENST00000549842 FBXO31Q5XUX0 539 aaPredicted RBP8.1□□□□□ -1.11
CPNE8-206ENST00000549842 ZNF598Q86UK7 904 aaKnown RBP8.1□□□□□ -1.11
CPNE8-206ENST00000549842 ZMYND15Q9H091 742 aa8.1□□□□□ -1.11
CPNE8-206ENST00000549842 ZBTB24O43167 697 aaPredicted RBP8.09□□□□□ -1.11
CPNE8-206ENST00000549842 KCNH2Q12809 1159 aa8.09□□□□□ -1.11
CPNE8-206ENST00000549842 F12P00748 615 aaPredicted RBP8.08□□□□□ -1.12
CPNE8-206ENST00000549842 RFC5P40937 340 aa8.08□□□□□ -1.12
CPNE8-206ENST00000549842 CCDC24Q8N4L8 307 aa8.07□□□□□ -1.12
CPNE8-206ENST00000549842 ATP1B4Q9UN42 357 aaPredicted RBP8.07□□□□□ -1.12
CPNE8-206ENST00000549842 SOCS7O14512 581 aa8.06□□□□□ -1.12
CPNE8-206ENST00000549842 CTDSPL2Q05D32 466 aa8.06□□□□□ -1.12
CPNE8-206ENST00000549842 PTCRAQ6ISU1 281 aaPredicted RBP8.06□□□□□ -1.12
CPNE8-206ENST00000549842 BANK1Q8NDB2 785 aa8.06□□□□□ -1.12
CPNE8-206ENST00000549842 PER1O15534 1290 aaPredicted RBP8.05□□□□□ -1.12
CPNE8-206ENST00000549842 WNT7BP56706 349 aa8.05□□□□□ -1.12
CPNE8-206ENST00000549842 TRIM32Q13049 653 aa8.05□□□□□ -1.12
CPNE8-206ENST00000549842 PRR20EP86478 221 aa8.04□□□□□ -1.12
CPNE8-206ENST00000549842 PRR20CP86479 221 aa8.04□□□□□ -1.12
CPNE8-206ENST00000549842 PRR20DP86480 221 aa8.04□□□□□ -1.12
CPNE8-206ENST00000549842 PRR20BP86481 221 aa8.04□□□□□ -1.12
CPNE8-206ENST00000549842 PRR20AP86496 221 aa8.04□□□□□ -1.12
CPNE8-206ENST00000549842 ZNF697Q5TEC3 545 aa8.04□□□□□ -1.12
CPNE8-206ENST00000549842 ARMC2Q8NEN0 867 aa8.04□□□□□ -1.12
CPNE8-206ENST00000549842 AP1G2O75843 785 aa8.03□□□□□ -1.12
CPNE8-206ENST00000549842 LAPTM4AQ15012 233 aa8.03□□□□□ -1.12
CPNE8-206ENST00000549842 TSC1Q92574 1164 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms