RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, human

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA2-216	ENST00000549396	ABCA5	Q8WWZ7	1642 aa		11.41	□□□□□ -0.58
PPFIA2-216	ENST00000549396	RRP1	P56182	461 aa	Known RBP	11.41	□□□□□ -0.58
PPFIA2-216	ENST00000549396	ATP6V1D	Q9Y5K8	247 aa		11.41	□□□□□ -0.58
PPFIA2-216	ENST00000549396	ERC2	O15083	957 aa		11.41	□□□□□ -0.58
PPFIA2-216	ENST00000549396	RAPGEF3	O95398	923 aa		11.41	□□□□□ -0.58
PPFIA2-216	ENST00000549396	MFAP1	P55081	439 aa	Known RBP	11.41	□□□□□ -0.58
PPFIA2-216	ENST00000549396	DZIP1L	Q8IYY4	767 aa	Known RBP	11.41	□□□□□ -0.58
PPFIA2-216	ENST00000549396	CDK19	Q9BWU1	502 aa		11.41	□□□□□ -0.58
PPFIA2-216	ENST00000549396	TSPYL4	Q9UJ04	414 aa		11.41	□□□□□ -0.58
PPFIA2-216	ENST00000549396	A2M	P01023	1474 aa		11.41	□□□□□ -0.58
PPFIA2-216	ENST00000549396	REC8	O95072	547 aa		11.41	□□□□□ -0.58
PPFIA2-216	ENST00000549396	B4GALNT3	Q6L9W6	998 aa		11.41	□□□□□ -0.58
PPFIA2-216	ENST00000549396	CPLX2	Q6PUV4	134 aa	Known RBP	11.41	□□□□□ -0.58
PPFIA2-216	ENST00000549396	ABTB2	Q8N961	1025 aa		11.41	□□□□□ -0.58
PPFIA2-216	ENST00000549396	PUS7	Q96PZ0	661 aa	Known RBP	11.41	□□□□□ -0.58
PPFIA2-216	ENST00000549396	NUTM2F	A1L443	756 aa		11.4	□□□□□ -0.58
PPFIA2-216	ENST00000549396	GNAI3	P08754	354 aa		11.4	□□□□□ -0.58
PPFIA2-216	ENST00000549396	ESCO1	Q5FWF5	840 aa		11.4	□□□□□ -0.58
PPFIA2-216	ENST00000549396	SCAF11	Q99590	1463 aa	Known RBP	11.4	□□□□□ -0.59
PPFIA2-216	ENST00000549396	TRIM6-TRIM34	B2RNG4	842 aa		11.4	□□□□□ -0.59
PPFIA2-216	ENST00000549396	CHAF1A	Q13111	956 aa	Predicted RBP	11.4	□□□□□ -0.59
PPFIA2-216	ENST00000549396	WDR63	Q8IWG1	891 aa		11.4	□□□□□ -0.59
PPFIA2-216	ENST00000549396	TNR	Q92752	1358 aa		11.39	□□□□□ -0.59
PPFIA2-216	ENST00000549396	CABP2	Q9NPB3	220 aa		11.39	□□□□□ -0.59
PPFIA2-216	ENST00000549396	ABCC11	Q96J66	1382 aa		11.39	□□□□□ -0.59
PPFIA2-216	ENST00000549396	FRAT2	O75474	233 aa	Predicted RBP	11.39	□□□□□ -0.59
PPFIA2-216	ENST00000549396	NUP153	P49790	1475 aa	Known RBP	11.39	□□□□□ -0.59
PPFIA2-216	ENST00000549396	PHF14	O94880	888 aa		11.39	□□□□□ -0.59
PPFIA2-216	ENST00000549396	RNF20	Q5VTR2	975 aa		11.39	□□□□□ -0.59
PPFIA2-216	ENST00000549396	NLRP2	Q9NX02	1062 aa		11.39	□□□□□ -0.59
PPFIA2-216	ENST00000549396	ERC1	Q8IUD2	1116 aa		11.38	□□□□□ -0.59
PPFIA2-216	ENST00000549396	G3BP1	Q13283	466 aa	Known RBP eCLIP	11.38	□□□□□ -0.59
PPFIA2-216	ENST00000549396	CCDC61	Q9Y6R9	512 aa		11.38	□□□□□ -0.59
PPFIA2-216	ENST00000549396	APAF1	O14727	1248 aa		11.38	□□□□□ -0.59
PPFIA2-216	ENST00000549396	SYNE3	Q6ZMZ3	975 aa		11.38	□□□□□ -0.59
PPFIA2-216	ENST00000549396	RPRD2	Q5VT52	1461 aa	Known RBP	11.37	□□□□□ -0.59
PPFIA2-216	ENST00000549396	HIP1	O00291	1037 aa		11.37	□□□□□ -0.59
PPFIA2-216	ENST00000549396	PPP2R1A	P30153	589 aa		11.36	□□□□□ -0.59
PPFIA2-216	ENST00000549396	NBR1	Q14596	966 aa		11.36	□□□□□ -0.59
PPFIA2-216	ENST00000549396	KIF6	Q6ZMV9	814 aa		11.36	□□□□□ -0.59
PPFIA2-216	ENST00000549396	IFIT2	P09913	472 aa	Known RBP	11.36	□□□□□ -0.59
PPFIA2-216	ENST00000549396	DCAF8L1	A6NGE4	600 aa		11.36	□□□□□ -0.59
PPFIA2-216	ENST00000549396	UHRF1BP1L	A0JNW5	1464 aa		11.35	□□□□□ -0.59
PPFIA2-216	ENST00000549396	NEO1	Q92859	1461 aa		11.35	□□□□□ -0.59
PPFIA2-216	ENST00000549396	FCHSD2	O94868	740 aa		11.35	□□□□□ -0.59
PPFIA2-216	ENST00000549396	DIAPH3	Q9NSV4	1193 aa		11.35	□□□□□ -0.59
PPFIA2-216	ENST00000549396	ZKSCAN1	P17029	563 aa	Predicted RBP	11.35	□□□□□ -0.59
PPFIA2-216	ENST00000549396	ISY1	Q9ULR0	285 aa	Known RBP	11.35	□□□□□ -0.59
PPFIA2-216	ENST00000549396	TMEM132E	Q6IEE7	984 aa		11.35	□□□□□ -0.59
PPFIA2-216	ENST00000549396	KIAA2012	Q0VF49	1180 aa		11.35	□□□□□ -0.59
PPFIA2-216	ENST00000549396	FAM161A	Q3B820	660 aa		11.34	□□□□□ -0.59
PPFIA2-216	ENST00000549396	TRIM34	Q9BYJ4	488 aa		11.34	□□□□□ -0.59
PPFIA2-216	ENST00000549396	FKBP5	Q13451	457 aa	Predicted RBP	11.34	□□□□□ -0.59
PPFIA2-216	ENST00000549396	GGNBP2	Q9H3C7	697 aa		11.34	□□□□□ -0.59
PPFIA2-216	ENST00000549396	AMOT	Q4VCS5	1084 aa		11.34	□□□□□ -0.59
PPFIA2-216	ENST00000549396	MTHFS	P49914	203 aa		11.33	□□□□□ -0.6
PPFIA2-216	ENST00000549396	CCT4	P50991	539 aa	Known RBP	11.33	□□□□□ -0.6
PPFIA2-216	ENST00000549396	AKAP17A	Q02040	695 aa	Known RBP	11.33	□□□□□ -0.6
PPFIA2-216	ENST00000549396	PDE3A	Q14432	1141 aa		11.33	□□□□□ -0.6
PPFIA2-216	ENST00000549396	TTC21B	Q7Z4L5	1316 aa		11.33	□□□□□ -0.6
PPFIA2-216	ENST00000549396	RIC3	Q7Z5B4	369 aa		11.32	□□□□□ -0.6
PPFIA2-216	ENST00000549396	SF3B2	Q13435	895 aa	Known RBP	11.32	□□□□□ -0.6
PPFIA2-216	ENST00000549396	RBM33	Q96EV2	1170 aa	Known RBP	11.31	□□□□□ -0.6
PPFIA2-216	ENST00000549396	RRP7A	Q9Y3A4	280 aa	Known RBP	11.31	□□□□□ -0.6
PPFIA2-216	ENST00000549396	APBB1	O00213	710 aa		11.31	□□□□□ -0.6
PPFIA2-216	ENST00000549396	SKOR2	Q2VWA4	1001 aa	Predicted RBP	11.31	□□□□□ -0.6
PPFIA2-216	ENST00000549396	INTS3	Q68E01	1043 aa	Known RBP	11.31	□□□□□ -0.6
PPFIA2-216	ENST00000549396	NUDT16	Q96DE0	195 aa	Known RBP	11.31	□□□□□ -0.6
PPFIA2-216	ENST00000549396	C14orf93	Q9H972	538 aa	Known RBP	11.31	□□□□□ -0.6
PPFIA2-216	ENST00000549396	TTC21A	Q8NDW8	1320 aa		11.31	□□□□□ -0.6
PPFIA2-216	ENST00000549396	ARHGEF12	Q9NZN5	1544 aa		11.31	□□□□□ -0.6
PPFIA2-216	ENST00000549396	DDX11L8	A8MPP1	907 aa		11.31	□□□□□ -0.6
PPFIA2-216	ENST00000549396	UBTFL1	P0CB47	393 aa	Predicted RBP	11.31	□□□□□ -0.6
PPFIA2-216	ENST00000549396	IL27	Q8NEV9	243 aa		11.31	□□□□□ -0.6
PPFIA2-216	ENST00000549396	TRDN	Q13061	729 aa		11.31	□□□□□ -0.6
PPFIA2-216	ENST00000549396	VPS37D	Q86XT2	251 aa		11.31	□□□□□ -0.6
PPFIA2-216	ENST00000549396	SYCP2	Q9BX26	1530 aa		11.3	□□□□□ -0.6
PPFIA2-216	ENST00000549396	USP35	Q9P2H5	1018 aa		11.3	□□□□□ -0.6
PPFIA2-216	ENST00000549396	ANKRD36B	Q8N2N9	1353 aa		11.3	□□□□□ -0.6
PPFIA2-216	ENST00000549396	GCC1	Q96CN9	775 aa		11.3	□□□□□ -0.6
PPFIA2-216	ENST00000549396	CABP1	Q9NZU7	370 aa		11.3	□□□□□ -0.6
PPFIA2-216	ENST00000549396	SAMD9	Q5K651	1589 aa		11.3	□□□□□ -0.6
PPFIA2-216	ENST00000549396	EIF2S2	P20042	333 aa	Known RBP	11.3	□□□□□ -0.6
PPFIA2-216	ENST00000549396	CADPS2	Q86UW7	1296 aa		11.3	□□□□□ -0.6
PPFIA2-216	ENST00000549396	ADGRL2	O95490	1459 aa		11.3	□□□□□ -0.6
PPFIA2-216	ENST00000549396	ANKRD45	Q5TZF3	282 aa		11.29	□□□□□ -0.6
PPFIA2-216	ENST00000549396	CLUAP1	Q96AJ1	413 aa		11.29	□□□□□ -0.6
PPFIA2-216	ENST00000549396	GNL3L	Q9NVN8	582 aa	Known RBP	11.29	□□□□□ -0.6
PPFIA2-216	ENST00000549396	CCDC47	Q96A33	483 aa	Known RBP	11.29	□□□□□ -0.6
PPFIA2-216	ENST00000549396	RALGAPB	Q86X10	1494 aa		11.28	□□□□□ -0.6
PPFIA2-216	ENST00000549396	NSD3	Q9BZ95	1437 aa		11.28	□□□□□ -0.6
PPFIA2-216	ENST00000549396	TCP11L2	Q8N4U5	519 aa		11.28	□□□□□ -0.6
PPFIA2-216	ENST00000549396	ERICH2	A1L162	156 aa		11.28	□□□□□ -0.6
PPFIA2-216	ENST00000549396	PRKAR2B	P31323	418 aa		11.28	□□□□□ -0.6
PPFIA2-216	ENST00000549396	CABP4	P57796	275 aa		11.28	□□□□□ -0.6
PPFIA2-216	ENST00000549396	TRIM29	Q14134	588 aa		11.28	□□□□□ -0.6
PPFIA2-216	ENST00000549396	WASL	O00401	505 aa	Predicted RBP	11.28	□□□□□ -0.6
PPFIA2-216	ENST00000549396	DNMT1	P26358	1616 aa	Known RBP	11.28	□□□□□ -0.6
PPFIA2-216	ENST00000549396	CEP170	Q5SW79	1584 aa		11.28	□□□□□ -0.6
PPFIA2-216	ENST00000549396	ATP10A	O60312	1499 aa		11.28	□□□□□ -0.6

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