RNA–Protein interactions for RNA: ENST00000549362.1

USP25-210, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 2

Gene USP25, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-210ENST00000549362 ZMYND15Q9H091 742 aa7.25□□□□□ -1.25
USP25-210ENST00000549362 SENP2Q9HC62 589 aa7.25□□□□□ -1.25
USP25-210ENST00000549362 PKD2L1Q9P0L9 805 aa7.25□□□□□ -1.25
USP25-210ENST00000549362 ATP1B4Q9UN42 357 aaPredicted RBP7.25□□□□□ -1.25
USP25-210ENST00000549362 PLEKHG3A1L390 1219 aa7.24□□□□□ -1.25
USP25-210ENST00000549362 GIGYF2Q6Y7W6 1299 aaKnown RBP7.24□□□□□ -1.25
USP25-210ENST00000549362 CYP4X1Q8N118 509 aa7.24□□□□□ -1.25
USP25-210ENST00000549362 CDHR5Q9HBB8 845 aa7.24□□□□□ -1.25
USP25-210ENST00000549362 C3orf80F5H4A9 247 aa7.23□□□□□ -1.25
USP25-210ENST00000549362 TLL1O43897 1013 aa7.23□□□□□ -1.25
USP25-210ENST00000549362 TOR4AQ9NXH8 423 aa7.23□□□□□ -1.25
USP25-210ENST00000549362 LCE2CQ5TA81 110 aa7.22□□□□□ -1.25
USP25-210ENST00000549362 PCMTD1Q96MG8 357 aaPredicted RBP7.22□□□□□ -1.25
USP25-210ENST00000549362 RSPH6AQ9H0K4 717 aa7.22□□□□□ -1.25
USP25-210ENST00000549362 ADH1BP00325 375 aa7.21□□□□□ -1.26
USP25-210ENST00000549362 CLCN1P35523 988 aa7.21□□□□□ -1.26
USP25-210ENST00000549362 MDM2Q00987 491 aaPredicted RBP7.2□□□□□ -1.26
USP25-210ENST00000549362 KIFC2Q96AC6 838 aa7.2□□□□□ -1.26
USP25-210ENST00000549362 TRIM47Q96LD4 638 aa7.2□□□□□ -1.26
USP25-210ENST00000549362 SLC6A16Q9GZN6 736 aa7.2□□□□□ -1.26
USP25-210ENST00000549362 NPDC1Q9NQX5 325 aaPredicted RBP7.2□□□□□ -1.26
USP25-210ENST00000549362 CD2BP2O95400 341 aaKnown RBP7.19□□□□□ -1.26
USP25-210ENST00000549362 RPIAP49247 311 aa7.19□□□□□ -1.26
USP25-210ENST00000549362 GPCPD1Q9NPB8 672 aa7.19□□□□□ -1.26
USP25-210ENST00000549362 ATP13A2Q9NQ11 1180 aa7.19□□□□□ -1.26
USP25-210ENST00000549362 MS4A1P11836 297 aa7.18□□□□□ -1.26
USP25-210ENST00000549362 SNRPBP14678 240 aaKnown RBP7.18□□□□□ -1.26
USP25-210ENST00000549362 FLIIQ13045 1269 aa7.18□□□□□ -1.26
USP25-210ENST00000549362 KMT5BQ4FZB7 885 aa7.18□□□□□ -1.26
USP25-210ENST00000549362 GOPCQ9HD26 462 aa7.18□□□□□ -1.26
USP25-210ENST00000549362 CCDC180Q9P1Z9 1646 aa7.18□□□□□ -1.26
USP25-210ENST00000549362 TTC24A2A3L6 582 aaPredicted RBP7.17□□□□□ -1.26
USP25-210ENST00000549362 NR1I2O75469 434 aa7.17□□□□□ -1.26
USP25-210ENST00000549362 OATP04181 439 aa7.17□□□□□ -1.26
USP25-210ENST00000549362 SSTR3P32745 418 aaPredicted RBP7.17□□□□□ -1.26
USP25-210ENST00000549362 PLA2G2CQ5R387 149 aa7.17□□□□□ -1.26
USP25-210ENST00000549362 IRF7Q92985 503 aa7.17□□□□□ -1.26
USP25-210ENST00000549362 REPIN1Q9BWE0 567 aaKnown RBP7.17□□□□□ -1.26
USP25-210ENST00000549362 ACTN4O43707 911 aaKnown RBP7.15□□□□□ -1.26
USP25-210ENST00000549362 FAM161AQ3B820 660 aa7.15□□□□□ -1.26
USP25-210ENST00000549362 GMPRP36959 345 aa7.14□□□□□ -1.27
USP25-210ENST00000549362 PADI6Q6TGC4 694 aa7.14□□□□□ -1.27
USP25-210ENST00000549362 NPAS3Q8IXF0 933 aa7.14□□□□□ -1.27
USP25-210ENST00000549362 BEGAINQ9BUH8 593 aa7.14□□□□□ -1.27
USP25-210ENST00000549362 SH3D19Q5HYK7 790 aa7.13□□□□□ -1.27
USP25-210ENST00000549362 PHOX2BQ99453 314 aa7.13□□□□□ -1.27
USP25-210ENST00000549362 ARID3AQ99856 593 aa7.13□□□□□ -1.27
USP25-210ENST00000549362 NXF1Q9UBU9 619 aaKnown RBP7.13□□□□□ -1.27
USP25-210ENST00000549362 ZCCHC6Q5VYS8 1495 aaKnown RBP7.12□□□□□ -1.27
USP25-210ENST00000549362 LORP23490 312 aaPredicted RBP7.12□□□□□ -1.27
USP25-210ENST00000549362 METTL3Q86U44 580 aaKnown RBP7.12□□□□□ -1.27
USP25-210ENST00000549362 NLRP7Q8WX94 980 aa7.12□□□□□ -1.27
USP25-210ENST00000549362 SKIV2LQ15477 1246 aaKnown RBP7.11□□□□□ -1.27
USP25-210ENST00000549362 TTC13Q8NBP0 860 aa7.11□□□□□ -1.27
USP25-210ENST00000549362 RBM46Q8TBY0 533 aaKnown RBP7.11□□□□□ -1.27
USP25-210ENST00000549362 POLR3EQ9NVU0 708 aa7.11□□□□□ -1.27
USP25-210ENST00000549362 UBTFP17480 764 aaKnown RBP7.1□□□□□ -1.27
USP25-210ENST00000549362 PXYLP1Q8TE99 480 aa7.1□□□□□ -1.27
USP25-210ENST00000549362 FAM217BQ9NTX9 383 aaPredicted RBP7.1□□□□□ -1.27
USP25-210ENST00000549362 ADGRG1Q9Y653 693 aa7.1□□□□□ -1.27
USP25-210ENST00000549362 KCNMA1Q12791 1236 aa7.09□□□□□ -1.27
USP25-210ENST00000549362 EYA1Q99502 592 aa7.09□□□□□ -1.27
USP25-210ENST00000549362 KCTD17Q8N5Z5 321 aa7.08□□□□□ -1.28
USP25-210ENST00000549362 SNIP1Q8TAD8 396 aaKnown RBP7.08□□□□□ -1.28
USP25-210ENST00000549362 SHROOM4Q9ULL8 1493 aa7.08□□□□□ -1.28
USP25-210ENST00000549362 APBB1O00213 710 aa7.07□□□□□ -1.28
USP25-210ENST00000549362 CFHP08603 1231 aa7.07□□□□□ -1.28
USP25-210ENST00000549362 DNAJB2P25686 324 aa7.07□□□□□ -1.28
USP25-210ENST00000549362 DIXDC1Q155Q3 683 aa7.07□□□□□ -1.28
USP25-210ENST00000549362 PROCA1Q8NCQ7 364 aaPredicted RBP7.07□□□□□ -1.28
USP25-210ENST00000549362 ARID3CA6NKF2 412 aa7.06□□□□□ -1.28
USP25-210ENST00000549362 ZBTB24O43167 697 aaPredicted RBP7.06□□□□□ -1.28
USP25-210ENST00000549362 RAD21O60216 631 aa7.06□□□□□ -1.28
USP25-210ENST00000549362 CLUAP1Q96AJ1 413 aa7.06□□□□□ -1.28
USP25-210ENST00000549362 SPSB2Q99619 263 aa7.06□□□□□ -1.28
USP25-210ENST00000549362 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.05□□□□□ -1.28
USP25-210ENST00000549362 SMPD1P17405 629 aa7.05□□□□□ -1.28
USP25-210ENST00000549362 CLK2P49760 499 aaKnown RBP7.04□□□□□ -1.28
USP25-210ENST00000549362 MYSM1Q5VVJ2 828 aa7.04□□□□□ -1.28
USP25-210ENST00000549362 SCUBE3Q8IX30 993 aa7.04□□□□□ -1.28
USP25-210ENST00000549362 TBC1D2Q9BYX2 928 aa7.04□□□□□ -1.28
USP25-210ENST00000549362 FCF1Q9Y324 198 aaKnown RBP7.04□□□□□ -1.28
USP25-210ENST00000549362 RCCD1A6NED2 376 aa7.03□□□□□ -1.28
USP25-210ENST00000549362 A6NJR5 290 aa7.03□□□□□ -1.28
USP25-210ENST00000549362 WNT7AO00755 349 aa7.03□□□□□ -1.28
USP25-210ENST00000549362 MCM6Q14566 821 aa7.03□□□□□ -1.28
USP25-210ENST00000549362 TMEM151AQ8N4L1 468 aa7.03□□□□□ -1.28
USP25-210ENST00000549362 H3BM21 787 aa7.02□□□□□ -1.29
USP25-210ENST00000549362 TRAK2O60296 914 aa7.02□□□□□ -1.29
USP25-210ENST00000549362 NUTM1Q86Y26 1132 aa7.02□□□□□ -1.29
USP25-210ENST00000549362 SULF1Q8IWU6 871 aa7.02□□□□□ -1.29
USP25-210ENST00000549362 DDX11L8A8MPP1 907 aa7.01□□□□□ -1.29
USP25-210ENST00000549362 TMEM134Q9H6X4 195 aa7.01□□□□□ -1.29
USP25-210ENST00000549362 RNF225M0QZC1 329 aaPredicted RBP7□□□□□ -1.29
USP25-210ENST00000549362 RIC3Q7Z5B4 369 aa7□□□□□ -1.29
USP25-210ENST00000549362 C1orf115Q9H7X2 142 aa7□□□□□ -1.29
USP25-210ENST00000549362 GDF11O95390 407 aa6.99□□□□□ -1.29
USP25-210ENST00000549362 RSPH4AQ5TD94 716 aa6.99□□□□□ -1.29
USP25-210ENST00000549362 PROSER2Q86WR7 435 aaPredicted RBP6.99□□□□□ -1.29
USP25-210ENST00000549362 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms