RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 NGEFQ8N5V2 710 aa18.18■□□□□ 0.5
RAPGEF3-218ENST00000548919 TMEM132EQ6IEE7 984 aa18.18■□□□□ 0.5
RAPGEF3-218ENST00000548919 PCDHB15Q9Y5E8 787 aa18.18■□□□□ 0.5
RAPGEF3-218ENST00000548919 RUNDC1Q96C34 613 aa18.17■□□□□ 0.5
RAPGEF3-218ENST00000548919 MAPK8IP3Q9UPT6 1336 aa18.17■□□□□ 0.5
RAPGEF3-218ENST00000548919 IFT172Q9UG01 1749 aa18.16■□□□□ 0.5
RAPGEF3-218ENST00000548919 CFAP65Q6ZU64 1925 aaKnown RBP18.16■□□□□ 0.5
RAPGEF3-218ENST00000548919 ARAP3Q8WWN8 1544 aa18.16■□□□□ 0.5
RAPGEF3-218ENST00000548919 ADGRL1O94910 1474 aa18.16■□□□□ 0.5
RAPGEF3-218ENST00000548919 MTHFSP49914 203 aa18.15■□□□□ 0.5
RAPGEF3-218ENST00000548919 SLKQ9H2G2 1235 aaPredicted RBP18.15■□□□□ 0.5
RAPGEF3-218ENST00000548919 NINLQ9Y2I6 1382 aa18.15■□□□□ 0.5
RAPGEF3-218ENST00000548919 NEURL4Q96JN8 1562 aa18.14■□□□□ 0.5
RAPGEF3-218ENST00000548919 EFCAB6Q5THR3 1501 aa18.14■□□□□ 0.49
RAPGEF3-218ENST00000548919 PPRC1Q5VV67 1664 aaKnown RBP18.14■□□□□ 0.49
RAPGEF3-218ENST00000548919 ABCA9Q8IUA7 1624 aa18.13■□□□□ 0.49
RAPGEF3-218ENST00000548919 MYO3AQ8NEV4 1616 aa18.13■□□□□ 0.49
RAPGEF3-218ENST00000548919 SBNO2Q9Y2G9 1366 aa18.13■□□□□ 0.49
RAPGEF3-218ENST00000548919 NRXN1Q9ULB1 1477 aa18.12■□□□□ 0.49
RAPGEF3-218ENST00000548919 IQSEC2Q5JU85 1478 aa18.12■□□□□ 0.49
RAPGEF3-218ENST00000548919 NLRP1Q9C000 1473 aa18.12■□□□□ 0.49
RAPGEF3-218ENST00000548919 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.12■□□□□ 0.49
RAPGEF3-218ENST00000548919 NUTM2DQ5VT03 806 aaPredicted RBP18.11■□□□□ 0.49
RAPGEF3-218ENST00000548919 PHF23Q9BUL5 403 aaPredicted RBP18.11■□□□□ 0.49
RAPGEF3-218ENST00000548919 PDZRN3Q9UPQ7 1066 aa18.11■□□□□ 0.49
RAPGEF3-218ENST00000548919 PMFBP1Q8TBY8 1022 aa18.1■□□□□ 0.49
RAPGEF3-218ENST00000548919 QRICH2Q9H0J4 1663 aa18.1■□□□□ 0.49
RAPGEF3-218ENST00000548919 SENP3Q9H4L4 574 aaPredicted RBP18.09■□□□□ 0.49
RAPGEF3-218ENST00000548919 WDR63Q8IWG1 891 aa18.09■□□□□ 0.49
RAPGEF3-218ENST00000548919 POGKQ9P215 609 aa18.09■□□□□ 0.49
RAPGEF3-218ENST00000548919 C14orf93Q9H972 538 aaKnown RBP18.08■□□□□ 0.49
RAPGEF3-218ENST00000548919 BECN1Q14457 450 aa18.08■□□□□ 0.48
RAPGEF3-218ENST00000548919 U2AF1L5P0DN76 240 aaPredicted RBP18.08■□□□□ 0.48
RAPGEF3-218ENST00000548919 U2AF1Q01081 240 aaKnown RBP eCLIP18.08■□□□□ 0.48
RAPGEF3-218ENST00000548919 ZNF518AQ6AHZ1 1483 aa18.07■□□□□ 0.48
RAPGEF3-218ENST00000548919 ADGRB3O60242 1522 aa18.07■□□□□ 0.48
RAPGEF3-218ENST00000548919 GGT6Q6P531 493 aa18.07■□□□□ 0.48
RAPGEF3-218ENST00000548919 ZC3H13Q5T200 1668 aaKnown RBP18.07■□□□□ 0.48
RAPGEF3-218ENST00000548919 KIDINS220Q9ULH0 1771 aa18.07■□□□□ 0.48
RAPGEF3-218ENST00000548919 TSR2Q969E8 191 aaKnown RBP18.06■□□□□ 0.48
RAPGEF3-218ENST00000548919 CFAP53Q96M91 514 aa18.06■□□□□ 0.48
RAPGEF3-218ENST00000548919 SETBP1Q9Y6X0 1596 aa18.06■□□□□ 0.48
RAPGEF3-218ENST00000548919 SAFB2Q14151 953 aaKnown RBP eCLIP18.05■□□□□ 0.48
RAPGEF3-218ENST00000548919 ADGRB1O14514 1584 aa18.05■□□□□ 0.48
RAPGEF3-218ENST00000548919 SPRYD3Q8NCJ5 442 aa18.04■□□□□ 0.48
RAPGEF3-218ENST00000548919 TBC1D32Q96NH3 1257 aa18.04■□□□□ 0.48
RAPGEF3-218ENST00000548919 RWDD1Q9H446 243 aaPredicted RBP18.04■□□□□ 0.48
RAPGEF3-218ENST00000548919 NPATQ14207 1427 aa18.03■□□□□ 0.48
RAPGEF3-218ENST00000548919 UPF2Q9HAU5 1272 aaKnown RBP18.03■□□□□ 0.48
RAPGEF3-218ENST00000548919 PPLO60437 1756 aa18.03■□□□□ 0.48
RAPGEF3-218ENST00000548919 MVPQ14764 893 aaKnown RBP18.03■□□□□ 0.48
RAPGEF3-218ENST00000548919 CCDC27Q2M243 656 aa18.03■□□□□ 0.48
RAPGEF3-218ENST00000548919 TBC1D2Q9BYX2 928 aa18.03■□□□□ 0.48
RAPGEF3-218ENST00000548919 MYH16Q9H6N6 1097 aa18.03■□□□□ 0.48
RAPGEF3-218ENST00000548919 ANTXR1Q9H6X2 564 aa18.03■□□□□ 0.48
RAPGEF3-218ENST00000548919 CABP2Q9NPB3 220 aa18.03■□□□□ 0.48
RAPGEF3-218ENST00000548919 FTSJ3Q8IY81 847 aaKnown RBP18.02■□□□□ 0.48
RAPGEF3-218ENST00000548919 AAMPQ13685 434 aa18.01■□□□□ 0.47
RAPGEF3-218ENST00000548919 ZKSCAN2Q63HK3 967 aa18■□□□□ 0.47
RAPGEF3-218ENST00000548919 DZIP1LQ8IYY4 767 aaKnown RBP18■□□□□ 0.47
RAPGEF3-218ENST00000548919 ASXL2Q76L83 1435 aa18■□□□□ 0.47
RAPGEF3-218ENST00000548919 U2SURPO15042 1029 aaKnown RBP18■□□□□ 0.47
RAPGEF3-218ENST00000548919 LMTK2Q8IWU2 1503 aa18■□□□□ 0.47
RAPGEF3-218ENST00000548919 EXOSC9Q06265 439 aaKnown RBP17.99■□□□□ 0.47
RAPGEF3-218ENST00000548919 SMC4Q9NTJ3 1288 aa17.99■□□□□ 0.47
RAPGEF3-218ENST00000548919 EVC2Q86UK5 1308 aa17.99■□□□□ 0.47
RAPGEF3-218ENST00000548919 USP32Q8NFA0 1604 aa17.98■□□□□ 0.47
RAPGEF3-218ENST00000548919 TULP4Q9NRJ4 1543 aa17.98■□□□□ 0.47
RAPGEF3-218ENST00000548919 ANKRD36BQ8N2N9 1353 aa17.97■□□□□ 0.47
RAPGEF3-218ENST00000548919 TRIM27P14373 513 aa17.97■□□□□ 0.47
RAPGEF3-218ENST00000548919 ARXQ96QS3 562 aa17.97■□□□□ 0.47
RAPGEF3-218ENST00000548919 GGNBP2Q9H3C7 697 aa17.97■□□□□ 0.47
RAPGEF3-218ENST00000548919 GLI2P10070 1586 aa17.96■□□□□ 0.47
RAPGEF3-218ENST00000548919 MFAP1P55081 439 aaKnown RBP17.96■□□□□ 0.47
RAPGEF3-218ENST00000548919 ITPRIPQ8IWB1 547 aa17.96■□□□□ 0.47
RAPGEF3-218ENST00000548919 SSH1Q8WYL5 1049 aa17.96■□□□□ 0.47
RAPGEF3-218ENST00000548919 STK26Q9P289 416 aa17.96■□□□□ 0.47
RAPGEF3-218ENST00000548919 CD109Q6YHK3 1445 aa17.95■□□□□ 0.46
RAPGEF3-218ENST00000548919 TRIM35Q9UPQ4 493 aa17.95■□□□□ 0.46
RAPGEF3-218ENST00000548919 TMPOP42166 694 aaKnown RBP17.94■□□□□ 0.46
RAPGEF3-218ENST00000548919 PLEKHF1Q96S99 279 aa17.94■□□□□ 0.46
RAPGEF3-218ENST00000548919 ADGRB2O60241 1585 aa17.94■□□□□ 0.46
RAPGEF3-218ENST00000548919 FRMPD1Q5SYB0 1578 aa17.94■□□□□ 0.46
RAPGEF3-218ENST00000548919 ZMYM3Q14202 1370 aa17.93■□□□□ 0.46
RAPGEF3-218ENST00000548919 ARHGEF28Q8N1W1 1705 aaKnown RBP17.93■□□□□ 0.46
RAPGEF3-218ENST00000548919 C22orf23Q9BZE7 217 aa17.93■□□□□ 0.46
RAPGEF3-218ENST00000548919 NOB1Q9ULX3 412 aaKnown RBP17.93■□□□□ 0.46
RAPGEF3-218ENST00000548919 A0A1W2PP64 1363 aa17.93■□□□□ 0.46
RAPGEF3-218ENST00000548919 RPGRIP1LQ68CZ1 1315 aa17.92■□□□□ 0.46
RAPGEF3-218ENST00000548919 SRPK2P78362 688 aaKnown RBP17.92■□□□□ 0.46
RAPGEF3-218ENST00000548919 NSD2O96028 1365 aa17.91■□□□□ 0.46
RAPGEF3-218ENST00000548919 ATF7IPQ6VMQ6 1270 aa17.91■□□□□ 0.46
RAPGEF3-218ENST00000548919 TMEM57Q8N5G2 664 aa17.9■□□□□ 0.46
RAPGEF3-218ENST00000548919 GZF1Q9H116 711 aaPredicted RBP17.9■□□□□ 0.46
RAPGEF3-218ENST00000548919 SIGLEC1Q9BZZ2 1709 aa17.9■□□□□ 0.46
RAPGEF3-218ENST00000548919 CAMSAP1Q5T5Y3 1602 aa17.9■□□□□ 0.46
RAPGEF3-218ENST00000548919 VGFO15240 615 aaPredicted RBP17.9■□□□□ 0.46
RAPGEF3-218ENST00000548919 ABCC3O15438 1527 aa17.89■□□□□ 0.45
RAPGEF3-218ENST00000548919 RIPK4P57078 832 aa17.89■□□□□ 0.45
RAPGEF3-218ENST00000548919 HDAC1Q13547 482 aaPredicted RBP17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms