RNA–Protein interactions for RNA: ENST00000548664.1

VDR-205, Transcript of vitamin D receptor, humanhuman

TSL 5

Gene VDR, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-205ENST00000548664 HFM1A2PYH4 1435 aa25.73■■□□□ 1.71
VDR-205ENST00000548664 VGFO15240 615 aaPredicted RBP25.73■■□□□ 1.71
VDR-205ENST00000548664 MYOM2P54296 1465 aa25.72■■□□□ 1.71
VDR-205ENST00000548664 NAIPQ13075 1403 aa25.71■■□□□ 1.71
VDR-205ENST00000548664 PXDNQ92626 1479 aa25.7■■□□□ 1.7
VDR-205ENST00000548664 PPARGC1BQ86YN6 1023 aaKnown RBP25.69■■□□□ 1.7
VDR-205ENST00000548664 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.68■■□□□ 1.7
VDR-205ENST00000548664 BCL9LQ86UU0 1499 aa25.67■■□□□ 1.7
VDR-205ENST00000548664 RPGRIP1LQ68CZ1 1315 aa25.66■■□□□ 1.7
VDR-205ENST00000548664 NPHP3Q7Z494 1330 aa25.65■■□□□ 1.7
VDR-205ENST00000548664 RRBP1Q9P2E9 1410 aaKnown RBP25.64■■□□□ 1.7
VDR-205ENST00000548664 ESCO1Q5FWF5 840 aa25.62■■□□□ 1.69
VDR-205ENST00000548664 ZRANB1Q9UGI0 708 aa25.6■■□□□ 1.69
VDR-205ENST00000548664 KNDC1Q76NI1 1749 aa25.6■■□□□ 1.69
VDR-205ENST00000548664 IFT172Q9UG01 1749 aa25.6■■□□□ 1.69
VDR-205ENST00000548664 FOXD1Q16676 465 aa25.59■■□□□ 1.69
VDR-205ENST00000548664 FMN2Q9NZ56 1722 aa25.58■■□□□ 1.69
VDR-205ENST00000548664 XPCQ01831 940 aaPredicted RBP25.58■■□□□ 1.69
VDR-205ENST00000548664 CCDC125Q86Z20 511 aa25.58■■□□□ 1.69
VDR-205ENST00000548664 GLI3P10071 1580 aa25.57■■□□□ 1.68
VDR-205ENST00000548664 TECPR2O15040 1411 aa25.57■■□□□ 1.68
VDR-205ENST00000548664 FOXO3O43524 673 aa25.57■■□□□ 1.68
VDR-205ENST00000548664 BRWD3Q6RI45 1802 aa25.56■■□□□ 1.68
VDR-205ENST00000548664 KIF1AQ12756 1690 aa25.56■■□□□ 1.68
VDR-205ENST00000548664 GJD4Q96KN9 370 aaPredicted RBP25.56■■□□□ 1.68
VDR-205ENST00000548664 LRPPRCP42704 1394 aaKnown RBP25.55■■□□□ 1.68
VDR-205ENST00000548664 SLC4A1APQ9BWU0 796 aaKnown RBP25.54■■□□□ 1.68
VDR-205ENST00000548664 USP32Q8NFA0 1604 aa25.54■■□□□ 1.68
VDR-205ENST00000548664 SLIT2O94813 1529 aa25.53■■□□□ 1.68
VDR-205ENST00000548664 ADGRF5Q8IZF2 1346 aa25.52■■□□□ 1.68
VDR-205ENST00000548664 RALGAPBQ86X10 1494 aa25.52■■□□□ 1.68
VDR-205ENST00000548664 RGPD8O14715 1765 aaPredicted RBP25.51■■□□□ 1.67
VDR-205ENST00000548664 NUTM2FA1L443 756 aa25.5■■□□□ 1.67
VDR-205ENST00000548664 WAPLQ7Z5K2 1190 aa25.5■■□□□ 1.67
VDR-205ENST00000548664 BLMP54132 1417 aaPredicted RBP25.48■■□□□ 1.67
VDR-205ENST00000548664 PLEKHH1Q9ULM0 1364 aa25.48■■□□□ 1.67
VDR-205ENST00000548664 UNC5CLQ8IV45 518 aa25.48■■□□□ 1.67
VDR-205ENST00000548664 PLCH1Q4KWH8 1693 aa25.48■■□□□ 1.67
VDR-205ENST00000548664 SPATA31E1Q6ZUB1 1445 aa25.47■■□□□ 1.67
VDR-205ENST00000548664 ABCC11Q96J66 1382 aa25.47■■□□□ 1.67
VDR-205ENST00000548664 SPATA31A3Q5VYP0 1347 aa25.47■■□□□ 1.67
VDR-205ENST00000548664 ABCA3Q99758 1704 aa25.47■■□□□ 1.67
VDR-205ENST00000548664 STK26Q9P289 416 aa25.47■■□□□ 1.67
VDR-205ENST00000548664 CCDC144AA2RUR9 1427 aa25.46■■□□□ 1.67
VDR-205ENST00000548664 NWD2Q9ULI1 1742 aa25.46■■□□□ 1.67
VDR-205ENST00000548664 PIK3C2GO75747 1445 aa25.45■■□□□ 1.66
VDR-205ENST00000548664 ANKRD30BQ9BXX2 1392 aa25.44■■□□□ 1.66
VDR-205ENST00000548664 TMEM132EQ6IEE7 984 aa25.42■■□□□ 1.66
VDR-205ENST00000548664 YTHDC2Q9H6S0 1430 aaKnown RBP25.41■■□□□ 1.66
VDR-205ENST00000548664 TNS3Q68CZ2 1445 aa25.4■■□□□ 1.66
VDR-205ENST00000548664 RGL3Q3MIN7 710 aa25.4■■□□□ 1.66
VDR-205ENST00000548664 KRT28Q7Z3Y7 464 aa25.39■■□□□ 1.66
VDR-205ENST00000548664 LRP5O75197 1615 aa25.38■■□□□ 1.65
VDR-205ENST00000548664 DEFB132Q7Z7B7 95 aa25.37■■□□□ 1.65
VDR-205ENST00000548664 VPS72Q15906 364 aa25.35■■□□□ 1.65
VDR-205ENST00000548664 SEPT12Q8IYM1 358 aa25.35■■□□□ 1.65
VDR-205ENST00000548664 NRXN1Q9ULB1 1477 aa25.34■■□□□ 1.65
VDR-205ENST00000548664 NRAPQ86VF7 1730 aa25.34■■□□□ 1.65
VDR-205ENST00000548664 CABLES1Q8TDN4 633 aa25.33■■□□□ 1.65
VDR-205ENST00000548664 PHF8Q9UPP1 1060 aa25.33■■□□□ 1.65
VDR-205ENST00000548664 HAP1P54257 671 aaPredicted RBP25.32■■□□□ 1.64
VDR-205ENST00000548664 SIRT1Q96EB6 747 aa25.32■■□□□ 1.64
VDR-205ENST00000548664 SBNO1A3KN83 1393 aa25.31■■□□□ 1.64
VDR-205ENST00000548664 ONECUT3O60422 494 aaPredicted RBP25.31■■□□□ 1.64
VDR-205ENST00000548664 SF3B2Q13435 895 aaKnown RBP25.31■■□□□ 1.64
VDR-205ENST00000548664 PSME1Q06323 249 aa25.3■■□□□ 1.64
VDR-205ENST00000548664 TRPM3Q9HCF6 1732 aaPredicted RBP25.29■■□□□ 1.64
VDR-205ENST00000548664 ARHGEF10O15013 1369 aa25.29■■□□□ 1.64
VDR-205ENST00000548664 KRT27Q7Z3Y8 459 aa25.28■■□□□ 1.64
VDR-205ENST00000548664 MPHOSPH9Q99550 1183 aa25.28■■□□□ 1.64
VDR-205ENST00000548664 C14orf93Q9H972 538 aaKnown RBP25.27■■□□□ 1.64
VDR-205ENST00000548664 CCDC9Q9Y3X0 531 aaKnown RBP25.27■■□□□ 1.64
VDR-205ENST00000548664 PLEKHG5O94827 1062 aa25.26■■□□□ 1.63
VDR-205ENST00000548664 ADGRB2O60241 1585 aa25.26■■□□□ 1.63
VDR-205ENST00000548664 ALS2Q96Q42 1657 aa25.26■■□□□ 1.63
VDR-205ENST00000548664 RGPD1P0DJD0 1748 aa25.24■■□□□ 1.63
VDR-205ENST00000548664 DHX57Q6P158 1386 aaKnown RBP25.24■■□□□ 1.63
VDR-205ENST00000548664 COL14A1Q05707 1796 aaKnown RBP25.23■■□□□ 1.63
VDR-205ENST00000548664 DLC1Q96QB1 1528 aa25.23■■□□□ 1.63
VDR-205ENST00000548664 ANKARQ7Z5J8 1434 aa25.23■■□□□ 1.63
VDR-205ENST00000548664 FAM83GA6ND36 823 aa25.23■■□□□ 1.63
VDR-205ENST00000548664 LMOD2Q6P5Q4 547 aa25.23■■□□□ 1.63
VDR-205ENST00000548664 CRYBG1Q9Y4K1 1723 aa25.23■■□□□ 1.63
VDR-205ENST00000548664 CFAP70Q5T0N1 1121 aa25.21■■□□□ 1.63
VDR-205ENST00000548664 PRAM1Q96QH2 718 aa25.21■■□□□ 1.63
VDR-205ENST00000548664 SAFB2Q14151 953 aaKnown RBP eCLIP25.2■■□□□ 1.62
VDR-205ENST00000548664 TNS1Q9HBL0 1735 aaKnown RBP25.18■■□□□ 1.62
VDR-205ENST00000548664 BAG6P46379 1132 aa25.18■■□□□ 1.62
VDR-205ENST00000548664 PMFBP1Q8TBY8 1022 aa25.18■■□□□ 1.62
VDR-205ENST00000548664 A0A0G2JS52 829 aa25.17■■□□□ 1.62
VDR-205ENST00000548664 MYT1Q01538 1121 aa25.17■■□□□ 1.62
VDR-205ENST00000548664 FAM98CQ17RN3 349 aaKnown RBP25.17■■□□□ 1.62
VDR-205ENST00000548664 THSD7AQ9UPZ6 1657 aa25.17■■□□□ 1.62
VDR-205ENST00000548664 PSDA5PKW4 1024 aaPredicted RBP25.16■■□□□ 1.62
VDR-205ENST00000548664 ADGRB1O14514 1584 aa25.16■■□□□ 1.62
VDR-205ENST00000548664 BTG4Q9NY30 223 aa25.16■■□□□ 1.62
VDR-205ENST00000548664 HRCP23327 699 aa25.14■■□□□ 1.62
VDR-205ENST00000548664 TULP4Q9NRJ4 1543 aa25.12■■□□□ 1.61
VDR-205ENST00000548664 POGKQ9P215 609 aa25.12■■□□□ 1.61
VDR-205ENST00000548664 GPRASP1Q5JY77 1395 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms