RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 NRXN1Q9ULB1 1477 aa16.65■□□□□ 0.26
BEST3-209ENST00000548658 YTHDC2Q9H6S0 1430 aaKnown RBP16.63■□□□□ 0.25
BEST3-209ENST00000548658 CFAP70Q5T0N1 1121 aa16.63■□□□□ 0.25
BEST3-209ENST00000548658 MEX3CQ5U5Q3 659 aaKnown RBP16.63■□□□□ 0.25
BEST3-209ENST00000548658 WAPLQ7Z5K2 1190 aa16.63■□□□□ 0.25
BEST3-209ENST00000548658 DCAF11Q8TEB1 546 aa16.62■□□□□ 0.25
BEST3-209ENST00000548658 LAMC1P11047 1609 aa16.62■□□□□ 0.25
BEST3-209ENST00000548658 NHSL1Q5SYE7 1610 aa16.61■□□□□ 0.25
BEST3-209ENST00000548658 ORAI2Q96SN7 254 aa16.61■□□□□ 0.25
BEST3-209ENST00000548658 SHPRHQ149N8 1683 aa16.61■□□□□ 0.25
BEST3-209ENST00000548658 ESCO1Q5FWF5 840 aa16.6■□□□□ 0.25
BEST3-209ENST00000548658 CDC42BPGQ6DT37 1551 aa16.6■□□□□ 0.25
BEST3-209ENST00000548658 KNDC1Q76NI1 1749 aa16.59■□□□□ 0.25
BEST3-209ENST00000548658 ZNF772Q68DY9 489 aaPredicted RBP16.59■□□□□ 0.25
BEST3-209ENST00000548658 KDM2AQ9Y2K7 1162 aa16.59■□□□□ 0.25
BEST3-209ENST00000548658 SOS2Q07890 1332 aaPredicted RBP16.59■□□□□ 0.25
BEST3-209ENST00000548658 POTEAQ6S8J7 498 aa16.58■□□□□ 0.24
BEST3-209ENST00000548658 DDX17Q92841 729 aaKnown RBP16.58■□□□□ 0.24
BEST3-209ENST00000548658 NPHP3Q7Z494 1330 aa16.58■□□□□ 0.24
BEST3-209ENST00000548658 NUTM2BA6NNL0 878 aaPredicted RBP16.57■□□□□ 0.24
BEST3-209ENST00000548658 NUTM2EB1AL46 878 aaPredicted RBP16.57■□□□□ 0.24
BEST3-209ENST00000548658 NUTM2AQ8IVF1 878 aaPredicted RBP16.57■□□□□ 0.24
BEST3-209ENST00000548658 PLEKHH1Q9ULM0 1364 aa16.56■□□□□ 0.24
BEST3-209ENST00000548658 POGKQ9P215 609 aa16.56■□□□□ 0.24
BEST3-209ENST00000548658 PNPLA6Q8IY17 1366 aa16.55■□□□□ 0.24
BEST3-209ENST00000548658 PRAM1Q96QH2 718 aa16.55■□□□□ 0.24
BEST3-209ENST00000548658 LRP6O75581 1613 aa16.55■□□□□ 0.24
BEST3-209ENST00000548658 FOXO3O43524 673 aa16.54■□□□□ 0.24
BEST3-209ENST00000548658 NUTM2FA1L443 756 aa16.53■□□□□ 0.24
BEST3-209ENST00000548658 DLC1Q96QB1 1528 aa16.53■□□□□ 0.24
BEST3-209ENST00000548658 TRAK1Q9UPV9 953 aa16.51■□□□□ 0.23
BEST3-209ENST00000548658 SAFB2Q14151 953 aaKnown RBP eCLIP16.5■□□□□ 0.23
BEST3-209ENST00000548658 ADGRB1O14514 1584 aa16.5■□□□□ 0.23
BEST3-209ENST00000548658 C8orf37Q96NL8 207 aa16.49■□□□□ 0.23
BEST3-209ENST00000548658 FMN2Q9NZ56 1722 aa16.48■□□□□ 0.23
BEST3-209ENST00000548658 PSME1Q06323 249 aa16.48■□□□□ 0.23
BEST3-209ENST00000548658 NGLY1Q96IV0 654 aa16.48■□□□□ 0.23
BEST3-209ENST00000548658 PHF8Q9UPP1 1060 aa16.48■□□□□ 0.23
BEST3-209ENST00000548658 EIF3AQ14152 1382 aaKnown RBP16.48■□□□□ 0.23
BEST3-209ENST00000548658 AFF2P51816 1311 aa16.47■□□□□ 0.23
BEST3-209ENST00000548658 ADAMTS2O95450 1211 aa16.47■□□□□ 0.23
BEST3-209ENST00000548658 RXRBP28702 533 aa16.47■□□□□ 0.23
BEST3-209ENST00000548658 PXDNQ92626 1479 aa16.47■□□□□ 0.23
BEST3-209ENST00000548658 KRT28Q7Z3Y7 464 aa16.46■□□□□ 0.23
BEST3-209ENST00000548658 KIF1AQ12756 1690 aa16.46■□□□□ 0.23
BEST3-209ENST00000548658 ANKARQ7Z5J8 1434 aa16.45■□□□□ 0.22
BEST3-209ENST00000548658 XPCQ01831 940 aaPredicted RBP16.45■□□□□ 0.22
BEST3-209ENST00000548658 SPATA31A3Q5VYP0 1347 aa16.44■□□□□ 0.22
BEST3-209ENST00000548658 MINK1Q8N4C8 1332 aaPredicted RBP16.44■□□□□ 0.22
BEST3-209ENST00000548658 WASLO00401 505 aaPredicted RBP16.43■□□□□ 0.22
BEST3-209ENST00000548658 HIRIP3Q9BW71 556 aaPredicted RBP16.43■□□□□ 0.22
BEST3-209ENST00000548658 QTRT2Q9H974 415 aaKnown RBP16.43■□□□□ 0.22
BEST3-209ENST00000548658 COL22A1Q8NFW1 1626 aaPredicted RBP16.43■□□□□ 0.22
BEST3-209ENST00000548658 ADGRB2O60241 1585 aa16.43■□□□□ 0.22
BEST3-209ENST00000548658 RBM6P78332 1123 aaKnown RBP16.41■□□□□ 0.22
BEST3-209ENST00000548658 FNBP4Q8N3X1 1017 aaPredicted RBP16.41■□□□□ 0.22
BEST3-209ENST00000548658 USP21Q9UK80 565 aa16.41■□□□□ 0.22
BEST3-209ENST00000548658 KIAA1210Q9ULL0 1709 aa16.41■□□□□ 0.22
BEST3-209ENST00000548658 CDK12Q9NYV4 1490 aaPredicted RBP16.4■□□□□ 0.22
BEST3-209ENST00000548658 SBNO1A3KN83 1393 aa16.39■□□□□ 0.21
BEST3-209ENST00000548658 RGPD8O14715 1765 aaPredicted RBP16.39■□□□□ 0.21
BEST3-209ENST00000548658 PMFBP1Q8TBY8 1022 aa16.39■□□□□ 0.21
BEST3-209ENST00000548658 L3MBTL2Q969R5 705 aa16.39■□□□□ 0.21
BEST3-209ENST00000548658 TRPC5Q9UL62 973 aaPredicted RBP16.39■□□□□ 0.21
BEST3-209ENST00000548658 GPRASP1Q5JY77 1395 aa16.38■□□□□ 0.21
BEST3-209ENST00000548658 HAP1P54257 671 aaPredicted RBP16.38■□□□□ 0.21
BEST3-209ENST00000548658 ARHGEF10O15013 1369 aa16.38■□□□□ 0.21
BEST3-209ENST00000548658 TNS3Q68CZ2 1445 aa16.37■□□□□ 0.21
BEST3-209ENST00000548658 TULP4Q9NRJ4 1543 aa16.37■□□□□ 0.21
BEST3-209ENST00000548658 NBPF1Q3BBV0 1214 aa16.37■□□□□ 0.21
BEST3-209ENST00000548658 TRIM26Q12899 539 aaPredicted RBP16.36■□□□□ 0.21
BEST3-209ENST00000548658 NEUROD1Q13562 356 aa16.36■□□□□ 0.21
BEST3-209ENST00000548658 LMOD2Q6P5Q4 547 aa16.36■□□□□ 0.21
BEST3-209ENST00000548658 NGDNQ8NEJ9 315 aaKnown RBP16.36■□□□□ 0.21
BEST3-209ENST00000548658 SIN3AQ96ST3 1273 aa16.36■□□□□ 0.21
BEST3-209ENST00000548658 POTEDQ86YR6 584 aa16.35■□□□□ 0.21
BEST3-209ENST00000548658 NUDT16Q96DE0 195 aaKnown RBP16.35■□□□□ 0.21
BEST3-209ENST00000548658 CDK19Q9BWU1 502 aa16.35■□□□□ 0.21
BEST3-209ENST00000548658 ARHGEF28Q8N1W1 1705 aaKnown RBP16.35■□□□□ 0.21
BEST3-209ENST00000548658 PRR36Q9H6K5 1346 aa16.35■□□□□ 0.21
BEST3-209ENST00000548658 USP32Q8NFA0 1604 aa16.34■□□□□ 0.21
BEST3-209ENST00000548658 CCDC61Q9Y6R9 512 aa16.33■□□□□ 0.2
BEST3-209ENST00000548658 CENPJQ9HC77 1338 aaPredicted RBP16.32■□□□□ 0.2
BEST3-209ENST00000548658 MARF1Q9Y4F3 1742 aaKnown RBP16.31■□□□□ 0.2
BEST3-209ENST00000548658 UNC5CLQ8IV45 518 aa16.31■□□□□ 0.2
BEST3-209ENST00000548658 BCL9LQ86UU0 1499 aa16.3■□□□□ 0.2
BEST3-209ENST00000548658 CABLES1Q8TDN4 633 aa16.3■□□□□ 0.2
BEST3-209ENST00000548658 ATRNO75882 1429 aa16.29■□□□□ 0.2
BEST3-209ENST00000548658 ITSN1Q15811 1721 aa16.29■□□□□ 0.2
BEST3-209ENST00000548658 PAK3O75914 559 aaPredicted RBP16.29■□□□□ 0.2
BEST3-209ENST00000548658 UPF1Q92900 1129 aaKnown RBP eCLIP16.29■□□□□ 0.2
BEST3-209ENST00000548658 GJD4Q96KN9 370 aaPredicted RBP16.29■□□□□ 0.2
BEST3-209ENST00000548658 ATP7BP35670 1465 aa16.29■□□□□ 0.2
BEST3-209ENST00000548658 PLEKHG3A1L390 1219 aa16.28■□□□□ 0.2
BEST3-209ENST00000548658 SRPK2P78362 688 aaKnown RBP16.28■□□□□ 0.2
BEST3-209ENST00000548658 CNKSR2Q8WXI2 1034 aa16.28■□□□□ 0.2
BEST3-209ENST00000548658 RGS12O14924 1447 aa16.28■□□□□ 0.2
BEST3-209ENST00000548658 ROCK2O75116 1388 aaKnown RBP16.27■□□□□ 0.2
BEST3-209ENST00000548658 SLIT2O94813 1529 aa16.27■□□□□ 0.2
BEST3-209ENST00000548658 PLEKHG5O94827 1062 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms