RNA–Protein interactions for RNA: ENST00000548390.5

LETMD1-215, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 549 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-215ENST00000548390 WAPLQ7Z5K2 1190 aa24.13■■□□□ 1.45
LETMD1-215ENST00000548390 NWD1Q149M9 1564 aa24.12■■□□□ 1.45
LETMD1-215ENST00000548390 STRCQ7RTU9 1775 aa24.11■■□□□ 1.45
LETMD1-215ENST00000548390 SAFB2Q14151 953 aaKnown RBP eCLIP24.11■■□□□ 1.45
LETMD1-215ENST00000548390 CHD2O14647 1828 aaKnown RBP24.11■■□□□ 1.45
LETMD1-215ENST00000548390 PLEKHH1Q9ULM0 1364 aa24.11■■□□□ 1.45
LETMD1-215ENST00000548390 NKTRP30414 1462 aaKnown RBP24.09■■□□□ 1.45
LETMD1-215ENST00000548390 MINK1Q8N4C8 1332 aaPredicted RBP24.09■■□□□ 1.45
LETMD1-215ENST00000548390 DDX10Q13206 875 aaKnown RBP24.08■■□□□ 1.45
LETMD1-215ENST00000548390 DIEXFQ68CQ4 756 aaKnown RBP24.07■■□□□ 1.44
LETMD1-215ENST00000548390 POLR3GLQ9BT43 218 aa24.07■■□□□ 1.44
LETMD1-215ENST00000548390 TULP4Q9NRJ4 1543 aa24.06■■□□□ 1.44
LETMD1-215ENST00000548390 ADGRB2O60241 1585 aa24.05■■□□□ 1.44
LETMD1-215ENST00000548390 ATAD2Q6PL18 1390 aa24.04■■□□□ 1.44
LETMD1-215ENST00000548390 WASLO00401 505 aaPredicted RBP24.03■■□□□ 1.44
LETMD1-215ENST00000548390 NINLQ9Y2I6 1382 aa24.03■■□□□ 1.44
LETMD1-215ENST00000548390 SRPK2P78362 688 aaKnown RBP24.02■■□□□ 1.44
LETMD1-215ENST00000548390 NCOA3Q9Y6Q9 1424 aa24.01■■□□□ 1.43
LETMD1-215ENST00000548390 CDK19Q9BWU1 502 aa24.01■■□□□ 1.43
LETMD1-215ENST00000548390 PROSER2Q86WR7 435 aaPredicted RBP23.98■■□□□ 1.43
LETMD1-215ENST00000548390 ADGRL3Q9HAR2 1447 aa23.97■■□□□ 1.43
LETMD1-215ENST00000548390 CABP2Q9NPB3 220 aa23.97■■□□□ 1.43
LETMD1-215ENST00000548390 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.97■■□□□ 1.43
LETMD1-215ENST00000548390 CDC42BPGQ6DT37 1551 aa23.93■■□□□ 1.42
LETMD1-215ENST00000548390 ANKARQ7Z5J8 1434 aa23.92■■□□□ 1.42
LETMD1-215ENST00000548390 C14orf37Q86TY3 774 aa23.91■■□□□ 1.42
LETMD1-215ENST00000548390 TMC1Q8TDI8 760 aa23.91■■□□□ 1.42
LETMD1-215ENST00000548390 PANK3Q9H999 370 aa23.91■■□□□ 1.42
LETMD1-215ENST00000548390 CCDC61Q9Y6R9 512 aa23.91■■□□□ 1.42
LETMD1-215ENST00000548390 TMEM94Q12767 1356 aa23.91■■□□□ 1.42
LETMD1-215ENST00000548390 NUDT16Q96DE0 195 aaKnown RBP23.9■■□□□ 1.42
LETMD1-215ENST00000548390 ZNF335Q9H4Z2 1342 aaPredicted RBP23.89■■□□□ 1.42
LETMD1-215ENST00000548390 C19orf44Q9H6X5 657 aa23.89■■□□□ 1.41
LETMD1-215ENST00000548390 MYOM1P52179 1685 aa23.89■■□□□ 1.41
LETMD1-215ENST00000548390 DCCP43146 1447 aa23.88■■□□□ 1.41
LETMD1-215ENST00000548390 TERF2IPQ9NYB0 399 aa23.88■■□□□ 1.41
LETMD1-215ENST00000548390 ANKRD36BQ8N2N9 1353 aa23.88■■□□□ 1.41
LETMD1-215ENST00000548390 ATP7BP35670 1465 aa23.87■■□□□ 1.41
LETMD1-215ENST00000548390 SLC12A5Q9H2X9 1139 aa23.87■■□□□ 1.41
LETMD1-215ENST00000548390 STRCP1A6NGW2 1772 aa23.87■■□□□ 1.41
LETMD1-215ENST00000548390 NALCNQ8IZF0 1738 aa23.86■■□□□ 1.41
LETMD1-215ENST00000548390 LRRC7Q96NW7 1537 aa23.84■■□□□ 1.41
LETMD1-215ENST00000548390 ANP32CO43423 234 aa23.84■■□□□ 1.41
LETMD1-215ENST00000548390 HDGFL2Q7Z4V5 671 aaPredicted RBP23.84■■□□□ 1.41
LETMD1-215ENST00000548390 CABP1Q9NZU7 370 aa23.84■■□□□ 1.41
LETMD1-215ENST00000548390 PPIP5K1Q6PFW1 1433 aa23.84■■□□□ 1.41
LETMD1-215ENST00000548390 PRR36Q9H6K5 1346 aa23.84■■□□□ 1.41
LETMD1-215ENST00000548390 MSH6P52701 1360 aa23.83■■□□□ 1.41
LETMD1-215ENST00000548390 PER1O15534 1290 aaPredicted RBP23.83■■□□□ 1.41
LETMD1-215ENST00000548390 RBM33Q96EV2 1170 aaKnown RBP23.83■■□□□ 1.41
LETMD1-215ENST00000548390 KNSTRNQ9Y448 316 aa23.83■■□□□ 1.41
LETMD1-215ENST00000548390 FMN2Q9NZ56 1722 aa23.82■■□□□ 1.4
LETMD1-215ENST00000548390 PLEKHG3A1L390 1219 aa23.82■■□□□ 1.4
LETMD1-215ENST00000548390 ATF3P18847 181 aa23.81■■□□□ 1.4
LETMD1-215ENST00000548390 CADPS2Q86UW7 1296 aa23.8■■□□□ 1.4
LETMD1-215ENST00000548390 KTN1Q86UP2 1357 aaKnown RBP23.79■■□□□ 1.4
LETMD1-215ENST00000548390 NPC1L1Q9UHC9 1359 aa23.79■■□□□ 1.4
LETMD1-215ENST00000548390 ZNF692Q9BU19 519 aaPredicted RBP23.79■■□□□ 1.4
LETMD1-215ENST00000548390 A0A1W2PP64 1363 aa23.78■■□□□ 1.4
LETMD1-215ENST00000548390 CPSF1Q10570 1443 aaKnown RBP23.77■■□□□ 1.4
LETMD1-215ENST00000548390 TOPAZ1Q8N9V7 1692 aa23.77■■□□□ 1.4
LETMD1-215ENST00000548390 ITSN1Q15811 1721 aa23.76■■□□□ 1.39
LETMD1-215ENST00000548390 CD163L1Q9NR16 1453 aa23.76■■□□□ 1.39
LETMD1-215ENST00000548390 CARD14Q9BXL6 1004 aa23.76■■□□□ 1.39
LETMD1-215ENST00000548390 USP32Q8NFA0 1604 aa23.76■■□□□ 1.39
LETMD1-215ENST00000548390 NUTM2FA1L443 756 aa23.75■■□□□ 1.39
LETMD1-215ENST00000548390 NSD3Q9BZ95 1437 aa23.75■■□□□ 1.39
LETMD1-215ENST00000548390 CGNL1Q0VF96 1302 aa23.74■■□□□ 1.39
LETMD1-215ENST00000548390 POLR3AO14802 1390 aaPredicted RBP23.74■■□□□ 1.39
LETMD1-215ENST00000548390 AMER1Q5JTC6 1135 aaPredicted RBP23.73■■□□□ 1.39
LETMD1-215ENST00000548390 PRKRIP1Q9H875 184 aaPredicted RBP23.73■■□□□ 1.39
LETMD1-215ENST00000548390 NSD2O96028 1365 aa23.73■■□□□ 1.39
LETMD1-215ENST00000548390 LTBP4Q8N2S1 1624 aa23.73■■□□□ 1.39
LETMD1-215ENST00000548390 RALBP1Q15311 655 aa23.72■■□□□ 1.39
LETMD1-215ENST00000548390 ACEP12821 1306 aa23.72■■□□□ 1.39
LETMD1-215ENST00000548390 C1orf167Q5SNV9 1468 aa23.71■■□□□ 1.39
LETMD1-215ENST00000548390 MST1RQ04912 1400 aa23.71■■□□□ 1.39
LETMD1-215ENST00000548390 EDC4Q6P2E9 1401 aaKnown RBP23.71■■□□□ 1.39
LETMD1-215ENST00000548390 MIER1Q8N108 512 aa23.71■■□□□ 1.39
LETMD1-215ENST00000548390 PHF8Q9UPP1 1060 aa23.71■■□□□ 1.39
LETMD1-215ENST00000548390 BRD4O60885 1362 aaPredicted RBP23.7■■□□□ 1.38
LETMD1-215ENST00000548390 NGDNQ8NEJ9 315 aaKnown RBP23.7■■□□□ 1.38
LETMD1-215ENST00000548390 ESCO1Q5FWF5 840 aa23.69■■□□□ 1.38
LETMD1-215ENST00000548390 XIRP1Q702N8 1843 aaKnown RBP23.68■■□□□ 1.38
LETMD1-215ENST00000548390 USP6P35125 1406 aa23.67■■□□□ 1.38
LETMD1-215ENST00000548390 PARD3Q8TEW0 1356 aa23.66■■□□□ 1.38
LETMD1-215ENST00000548390 PMFBP1Q8TBY8 1022 aa23.66■■□□□ 1.38
LETMD1-215ENST00000548390 CCER2I3L3R5 266 aa23.65■■□□□ 1.38
LETMD1-215ENST00000548390 CC2D1BQ5T0F9 858 aaKnown RBP23.64■■□□□ 1.37
LETMD1-215ENST00000548390 AKAP12Q02952 1782 aa23.64■■□□□ 1.37
LETMD1-215ENST00000548390 MON2Q7Z3U7 1717 aa23.64■■□□□ 1.37
LETMD1-215ENST00000548390 KIF1AQ12756 1690 aa23.64■■□□□ 1.37
LETMD1-215ENST00000548390 TTC21AQ8NDW8 1320 aa23.63■■□□□ 1.37
LETMD1-215ENST00000548390 ORAI2Q96SN7 254 aa23.62■■□□□ 1.37
LETMD1-215ENST00000548390 SSH2Q76I76 1423 aa23.61■■□□□ 1.37
LETMD1-215ENST00000548390 SLAIN2Q9P270 581 aa23.61■■□□□ 1.37
LETMD1-215ENST00000548390 TTC21BQ7Z4L5 1316 aa23.6■■□□□ 1.37
LETMD1-215ENST00000548390 MYBBP1AQ9BQG0 1328 aaKnown RBP23.6■■□□□ 1.37
LETMD1-215ENST00000548390 RGPD8O14715 1765 aaPredicted RBP23.6■■□□□ 1.37
LETMD1-215ENST00000548390 FYB1O15117 783 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms