RNA–Protein interactions for RNA: ENST00000548130.5

SMARCC2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 5

Gene SMARCC2, Length 1,238 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-205ENST00000548130 ROBO2Q9HCK4 1378 aa12.87□□□□□ -0.35
SMARCC2-205ENST00000548130 L3MBTL2Q969R5 705 aa12.86□□□□□ -0.35
SMARCC2-205ENST00000548130 SETD1AO15047 1707 aaKnown RBP12.85□□□□□ -0.35
SMARCC2-205ENST00000548130 XRN1Q8IZH2 1706 aaKnown RBP12.85□□□□□ -0.35
SMARCC2-205ENST00000548130 LRPPRCP42704 1394 aaKnown RBP12.85□□□□□ -0.35
SMARCC2-205ENST00000548130 ASXL1Q8IXJ9 1541 aa12.85□□□□□ -0.35
SMARCC2-205ENST00000548130 STAC3Q96MF2 364 aa12.85□□□□□ -0.35
SMARCC2-205ENST00000548130 C19orf44Q9H6X5 657 aa12.85□□□□□ -0.35
SMARCC2-205ENST00000548130 NCOA3Q9Y6Q9 1424 aa12.85□□□□□ -0.35
SMARCC2-205ENST00000548130 XIRP1Q702N8 1843 aaKnown RBP12.85□□□□□ -0.35
SMARCC2-205ENST00000548130 PTCH1Q13635 1447 aa12.83□□□□□ -0.36
SMARCC2-205ENST00000548130 YTHDC2Q9H6S0 1430 aaKnown RBP12.83□□□□□ -0.36
SMARCC2-205ENST00000548130 WAPLQ7Z5K2 1190 aa12.83□□□□□ -0.36
SMARCC2-205ENST00000548130 ABCC11Q96J66 1382 aa12.82□□□□□ -0.36
SMARCC2-205ENST00000548130 ATF3P18847 181 aa12.82□□□□□ -0.36
SMARCC2-205ENST00000548130 PLEKHH1Q9ULM0 1364 aa12.81□□□□□ -0.36
SMARCC2-205ENST00000548130 HSPA1LP34931 641 aa12.81□□□□□ -0.36
SMARCC2-205ENST00000548130 CADPS2Q86UW7 1296 aa12.81□□□□□ -0.36
SMARCC2-205ENST00000548130 SLAIN2Q9P270 581 aa12.81□□□□□ -0.36
SMARCC2-205ENST00000548130 PRAG1Q86YV5 1406 aa12.8□□□□□ -0.36
SMARCC2-205ENST00000548130 TRAK1Q9UPV9 953 aa12.8□□□□□ -0.36
SMARCC2-205ENST00000548130 TECPR2O15040 1411 aa12.79□□□□□ -0.36
SMARCC2-205ENST00000548130 ADGRL3Q9HAR2 1447 aa12.79□□□□□ -0.36
SMARCC2-205ENST00000548130 SAFB2Q14151 953 aaKnown RBP eCLIP12.79□□□□□ -0.36
SMARCC2-205ENST00000548130 ADGRB1O14514 1584 aa12.78□□□□□ -0.36
SMARCC2-205ENST00000548130 NBPF1Q3BBV0 1214 aa12.78□□□□□ -0.36
SMARCC2-205ENST00000548130 PRAM1Q96QH2 718 aa12.78□□□□□ -0.36
SMARCC2-205ENST00000548130 TONSLQ96HA7 1378 aa12.78□□□□□ -0.36
SMARCC2-205ENST00000548130 FAM135BQ49AJ0 1406 aa12.78□□□□□ -0.36
SMARCC2-205ENST00000548130 SIRT1Q96EB6 747 aa12.77□□□□□ -0.37
SMARCC2-205ENST00000548130 POGKQ9P215 609 aa12.77□□□□□ -0.37
SMARCC2-205ENST00000548130 DCCP43146 1447 aa12.77□□□□□ -0.37
SMARCC2-205ENST00000548130 LAMC1P11047 1609 aa12.77□□□□□ -0.37
SMARCC2-205ENST00000548130 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.76□□□□□ -0.37
SMARCC2-205ENST00000548130 NBPF8Q3BBV2 869 aa12.76□□□□□ -0.37
SMARCC2-205ENST00000548130 MST1RQ04912 1400 aa12.75□□□□□ -0.37
SMARCC2-205ENST00000548130 CCER1Q8TC90 406 aaPredicted RBP12.75□□□□□ -0.37
SMARCC2-205ENST00000548130 NUTM2FA1L443 756 aa12.74□□□□□ -0.37
SMARCC2-205ENST00000548130 BRINP3Q76B58 766 aa12.74□□□□□ -0.37
SMARCC2-205ENST00000548130 NALCNQ8IZF0 1738 aa12.74□□□□□ -0.37
SMARCC2-205ENST00000548130 AKT1S1Q96B36 256 aa12.73□□□□□ -0.37
SMARCC2-205ENST00000548130 KNDC1Q76NI1 1749 aa12.73□□□□□ -0.37
SMARCC2-205ENST00000548130 DLC1Q96QB1 1528 aa12.72□□□□□ -0.37
SMARCC2-205ENST00000548130 MINK1Q8N4C8 1332 aaPredicted RBP12.72□□□□□ -0.37
SMARCC2-205ENST00000548130 ORAI2Q96SN7 254 aa12.72□□□□□ -0.37
SMARCC2-205ENST00000548130 HIRIP3Q9BW71 556 aaPredicted RBP12.72□□□□□ -0.37
SMARCC2-205ENST00000548130 ROBO1Q9Y6N7 1651 aa12.72□□□□□ -0.37
SMARCC2-205ENST00000548130 C1orf167Q5SNV9 1468 aa12.72□□□□□ -0.37
SMARCC2-205ENST00000548130 DDX17Q92841 729 aaKnown RBP12.71□□□□□ -0.37
SMARCC2-205ENST00000548130 ROCK2O75116 1388 aaKnown RBP12.7□□□□□ -0.38
SMARCC2-205ENST00000548130 CLSPNQ9HAW4 1339 aa12.7□□□□□ -0.38
SMARCC2-205ENST00000548130 ESCO1Q5FWF5 840 aa12.69□□□□□ -0.38
SMARCC2-205ENST00000548130 CDC42BPGQ6DT37 1551 aa12.69□□□□□ -0.38
SMARCC2-205ENST00000548130 KIAA1210Q9ULL0 1709 aa12.68□□□□□ -0.38
SMARCC2-205ENST00000548130 WASLO00401 505 aaPredicted RBP12.66□□□□□ -0.38
SMARCC2-205ENST00000548130 CARD11Q9BXL7 1154 aa12.66□□□□□ -0.38
SMARCC2-205ENST00000548130 CENPJQ9HC77 1338 aaPredicted RBP12.65□□□□□ -0.38
SMARCC2-205ENST00000548130 POTEHQ6S545 545 aa12.65□□□□□ -0.38
SMARCC2-205ENST00000548130 GPRASP1Q5JY77 1395 aa12.65□□□□□ -0.38
SMARCC2-205ENST00000548130 TRPM1Q7Z4N2 1603 aa12.65□□□□□ -0.38
SMARCC2-205ENST00000548130 AHDC1Q5TGY3 1603 aaPredicted RBP12.64□□□□□ -0.39
SMARCC2-205ENST00000548130 FOXO3O43524 673 aa12.64□□□□□ -0.39
SMARCC2-205ENST00000548130 XPCQ01831 940 aaPredicted RBP12.64□□□□□ -0.39
SMARCC2-205ENST00000548130 ARHGEF28Q8N1W1 1705 aaKnown RBP12.64□□□□□ -0.39
SMARCC2-205ENST00000548130 RALGAPBQ86X10 1494 aa12.64□□□□□ -0.39
SMARCC2-205ENST00000548130 PRR36Q9H6K5 1346 aa12.63□□□□□ -0.39
SMARCC2-205ENST00000548130 PHLPP1O60346 1717 aa12.63□□□□□ -0.39
SMARCC2-205ENST00000548130 SPDYE2BA6NHP3 402 aa12.63□□□□□ -0.39
SMARCC2-205ENST00000548130 SPDYE6P0CI01 402 aa12.63□□□□□ -0.39
SMARCC2-205ENST00000548130 SPDYE2Q495Y8 402 aa12.63□□□□□ -0.39
SMARCC2-205ENST00000548130 CDK19Q9BWU1 502 aa12.63□□□□□ -0.39
SMARCC2-205ENST00000548130 TIMELESSQ9UNS1 1208 aa12.63□□□□□ -0.39
SMARCC2-205ENST00000548130 JCADQ9P266 1359 aa12.63□□□□□ -0.39
SMARCC2-205ENST00000548130 ADGRB2O60241 1585 aa12.62□□□□□ -0.39
SMARCC2-205ENST00000548130 PMFBP1Q8TBY8 1022 aa12.62□□□□□ -0.39
SMARCC2-205ENST00000548130 PHF8Q9UPP1 1060 aa12.62□□□□□ -0.39
SMARCC2-205ENST00000548130 FMN2Q9NZ56 1722 aa12.62□□□□□ -0.39
SMARCC2-205ENST00000548130 COL16A1Q07092 1604 aaPredicted RBP12.62□□□□□ -0.39
SMARCC2-205ENST00000548130 ANKARQ7Z5J8 1434 aa12.62□□□□□ -0.39
SMARCC2-205ENST00000548130 SOS2Q07890 1332 aaPredicted RBP12.62□□□□□ -0.39
SMARCC2-205ENST00000548130 NPHP3Q7Z494 1330 aa12.62□□□□□ -0.39
SMARCC2-205ENST00000548130 EIF3AQ14152 1382 aaKnown RBP12.61□□□□□ -0.39
SMARCC2-205ENST00000548130 SRPK2P78362 688 aaKnown RBP12.6□□□□□ -0.39
SMARCC2-205ENST00000548130 MKRN4PQ13434 485 aaPredicted RBP12.6□□□□□ -0.39
SMARCC2-205ENST00000548130 LRRC59Q96AG4 307 aaKnown RBP12.6□□□□□ -0.39
SMARCC2-205ENST00000548130 NUDT16Q96DE0 195 aaKnown RBP12.6□□□□□ -0.39
SMARCC2-205ENST00000548130 CABP2Q9NPB3 220 aa12.6□□□□□ -0.39
SMARCC2-205ENST00000548130 TULP4Q9NRJ4 1543 aa12.59□□□□□ -0.39
SMARCC2-205ENST00000548130 NHSL1Q5SYE7 1610 aa12.59□□□□□ -0.39
SMARCC2-205ENST00000548130 NUTM2BA6NNL0 878 aaPredicted RBP12.58□□□□□ -0.4
SMARCC2-205ENST00000548130 NUTM2EB1AL46 878 aaPredicted RBP12.58□□□□□ -0.4
SMARCC2-205ENST00000548130 CHRDL2Q6WN34 429 aa12.58□□□□□ -0.4
SMARCC2-205ENST00000548130 KRT28Q7Z3Y7 464 aa12.58□□□□□ -0.4
SMARCC2-205ENST00000548130 NUTM2AQ8IVF1 878 aaPredicted RBP12.58□□□□□ -0.4
SMARCC2-205ENST00000548130 PSME1Q06323 249 aa12.57□□□□□ -0.4
SMARCC2-205ENST00000548130 NGDNQ8NEJ9 315 aaKnown RBP12.57□□□□□ -0.4
SMARCC2-205ENST00000548130 USP32Q8NFA0 1604 aa12.57□□□□□ -0.4
SMARCC2-205ENST00000548130 EVC2Q86UK5 1308 aa12.57□□□□□ -0.4
SMARCC2-205ENST00000548130 PNPLA6Q8IY17 1366 aa12.56□□□□□ -0.4
SMARCC2-205ENST00000548130 MED1Q15648 1581 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms