RNA–Protein interactions for RNA: ENST00000548086.2

SCN8A-205, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 1,966 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-205ENST00000548086 MINK1Q8N4C8 1332 aaPredicted RBP15.38■□□□□ 0.05
SCN8A-205ENST00000548086 DDX10Q13206 875 aaKnown RBP15.36■□□□□ 0.05
SCN8A-205ENST00000548086 RBM33Q96EV2 1170 aaKnown RBP15.36■□□□□ 0.05
SCN8A-205ENST00000548086 PIK3R4Q99570 1358 aa15.35■□□□□ 0.05
SCN8A-205ENST00000548086 TMF1P82094 1093 aa15.35■□□□□ 0.05
SCN8A-205ENST00000548086 TULP4Q9NRJ4 1543 aa15.35■□□□□ 0.05
SCN8A-205ENST00000548086 SBNO2Q9Y2G9 1366 aa15.34■□□□□ 0.05
SCN8A-205ENST00000548086 STRCP1A6NGW2 1772 aa15.34■□□□□ 0.05
SCN8A-205ENST00000548086 YTHDC1Q96MU7 727 aaKnown RBP15.34■□□□□ 0.05
SCN8A-205ENST00000548086 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.34■□□□□ 0.05
SCN8A-205ENST00000548086 FAM135BQ49AJ0 1406 aa15.34■□□□□ 0.05
SCN8A-205ENST00000548086 PTCH1Q13635 1447 aa15.33■□□□□ 0.04
SCN8A-205ENST00000548086 NWD1Q149M9 1564 aa15.32■□□□□ 0.04
SCN8A-205ENST00000548086 SIRT1Q96EB6 747 aa15.31■□□□□ 0.04
SCN8A-205ENST00000548086 CABP2Q9NPB3 220 aa15.3■□□□□ 0.04
SCN8A-205ENST00000548086 ZNF335Q9H4Z2 1342 aaPredicted RBP15.29■□□□□ 0.04
SCN8A-205ENST00000548086 EVC2Q86UK5 1308 aa15.29■□□□□ 0.04
SCN8A-205ENST00000548086 MYOM1P52179 1685 aa15.28■□□□□ 0.04
SCN8A-205ENST00000548086 NALCNQ8IZF0 1738 aa15.28■□□□□ 0.04
SCN8A-205ENST00000548086 SRPK2P78362 688 aaKnown RBP15.27■□□□□ 0.04
SCN8A-205ENST00000548086 CDK19Q9BWU1 502 aa15.27■□□□□ 0.04
SCN8A-205ENST00000548086 NUTM2FA1L443 756 aa15.26■□□□□ 0.03
SCN8A-205ENST00000548086 PROSER2Q86WR7 435 aaPredicted RBP15.25■□□□□ 0.03
SCN8A-205ENST00000548086 ADGRB2O60241 1585 aa15.25■□□□□ 0.03
SCN8A-205ENST00000548086 WASLO00401 505 aaPredicted RBP15.25■□□□□ 0.03
SCN8A-205ENST00000548086 NKTRP30414 1462 aaKnown RBP15.25■□□□□ 0.03
SCN8A-205ENST00000548086 CDCA8Q53HL2 280 aa15.24■□□□□ 0.03
SCN8A-205ENST00000548086 SLC24A1O60721 1099 aa15.24■□□□□ 0.03
SCN8A-205ENST00000548086 C14orf37Q86TY3 774 aa15.23■□□□□ 0.03
SCN8A-205ENST00000548086 TMC1Q8TDI8 760 aa15.23■□□□□ 0.03
SCN8A-205ENST00000548086 DMRT2Q9Y5R5 561 aa15.23■□□□□ 0.03
SCN8A-205ENST00000548086 TMEM94Q12767 1356 aa15.22■□□□□ 0.03
SCN8A-205ENST00000548086 SLC12A5Q9H2X9 1139 aa15.22■□□□□ 0.03
SCN8A-205ENST00000548086 PRR36Q9H6K5 1346 aa15.22■□□□□ 0.03
SCN8A-205ENST00000548086 ADGRL3Q9HAR2 1447 aa15.21■□□□□ 0.03
SCN8A-205ENST00000548086 CNGB1Q14028 1251 aaPredicted RBP15.21■□□□□ 0.03
SCN8A-205ENST00000548086 PANK3Q9H999 370 aa15.21■□□□□ 0.03
SCN8A-205ENST00000548086 XIRP1Q702N8 1843 aaKnown RBP15.21■□□□□ 0.03
SCN8A-205ENST00000548086 ATP7BP35670 1465 aa15.2■□□□□ 0.02
SCN8A-205ENST00000548086 USP32Q8NFA0 1604 aa15.2■□□□□ 0.02
SCN8A-205ENST00000548086 RGPD8O14715 1765 aaPredicted RBP15.2■□□□□ 0.02
SCN8A-205ENST00000548086 NUDT16Q96DE0 195 aaKnown RBP15.19■□□□□ 0.02
SCN8A-205ENST00000548086 LRRC7Q96NW7 1537 aa15.19■□□□□ 0.02
SCN8A-205ENST00000548086 ATAD2Q6PL18 1390 aa15.19■□□□□ 0.02
SCN8A-205ENST00000548086 FMN2Q9NZ56 1722 aa15.18■□□□□ 0.02
SCN8A-205ENST00000548086 CDC42BPGQ6DT37 1551 aa15.18■□□□□ 0.02
SCN8A-205ENST00000548086 CABP1Q9NZU7 370 aa15.18■□□□□ 0.02
SCN8A-205ENST00000548086 PPIP5K1Q6PFW1 1433 aa15.17■□□□□ 0.02
SCN8A-205ENST00000548086 PUS7Q96PZ0 661 aaKnown RBP15.16■□□□□ 0.02
SCN8A-205ENST00000548086 TOPAZ1Q8N9V7 1692 aa15.15■□□□□ 0.02
SCN8A-205ENST00000548086 CARD14Q9BXL6 1004 aa15.15■□□□□ 0.02
SCN8A-205ENST00000548086 CD163L1Q9NR16 1453 aa15.15■□□□□ 0.02
SCN8A-205ENST00000548086 A0A1W2PP64 1363 aa15.15■□□□□ 0.02
SCN8A-205ENST00000548086 PER1O15534 1290 aaPredicted RBP15.15■□□□□ 0.02
SCN8A-205ENST00000548086 CCDC61Q9Y6R9 512 aa15.15■□□□□ 0.02
SCN8A-205ENST00000548086 C19orf44Q9H6X5 657 aa15.14■□□□□ 0.01
SCN8A-205ENST00000548086 PMFBP1Q8TBY8 1022 aa15.13■□□□□ 0.01
SCN8A-205ENST00000548086 LTBP4Q8N2S1 1624 aa15.13■□□□□ 0.01
SCN8A-205ENST00000548086 ANKRD36BQ8N2N9 1353 aa15.13■□□□□ 0.01
SCN8A-205ENST00000548086 NSD3Q9BZ95 1437 aa15.12■□□□□ 0.01
SCN8A-205ENST00000548086 ITSN1Q15811 1721 aa15.11■□□□□ 0.01
SCN8A-205ENST00000548086 MSH6P52701 1360 aa15.11■□□□□ 0.01
SCN8A-205ENST00000548086 NINLQ9Y2I6 1382 aa15.11■□□□□ 0.01
SCN8A-205ENST00000548086 ANKARQ7Z5J8 1434 aa15.1■□□□□ 0.01
SCN8A-205ENST00000548086 NCOA3Q9Y6Q9 1424 aa15.1■□□□□ 0.01
SCN8A-205ENST00000548086 ATF3P18847 181 aa15.1■□□□□ 0.01
SCN8A-205ENST00000548086 CC2D1BQ5T0F9 858 aaKnown RBP15.1■□□□□ 0.01
SCN8A-205ENST00000548086 ACEP12821 1306 aa15.1■□□□□ 0.01
SCN8A-205ENST00000548086 ORAI2Q96SN7 254 aa15.09■□□□□ 0.01
SCN8A-205ENST00000548086 KNSTRNQ9Y448 316 aa15.09■□□□□ 0.01
SCN8A-205ENST00000548086 MST1RQ04912 1400 aa15.09■□□□□ 0.01
SCN8A-205ENST00000548086 CPSF1Q10570 1443 aaKnown RBP15.09■□□□□ 0.01
SCN8A-205ENST00000548086 ESCO1Q5FWF5 840 aa15.09■□□□□ 0.01
SCN8A-205ENST00000548086 TERF2IPQ9NYB0 399 aa15.09■□□□□ 0.01
SCN8A-205ENST00000548086 AKAP12Q02952 1782 aa15.08■□□□□ 0.01
SCN8A-205ENST00000548086 ANP32CO43423 234 aa15.08■□□□□ 0
SCN8A-205ENST00000548086 HDGFL2Q7Z4V5 671 aaPredicted RBP15.08■□□□□ 0
SCN8A-205ENST00000548086 C1orf167Q5SNV9 1468 aa15.08■□□□□ 0
SCN8A-205ENST00000548086 DCCP43146 1447 aa15.08■□□□□ 0
SCN8A-205ENST00000548086 PLEKHG3A1L390 1219 aa15.07■□□□□ 0
SCN8A-205ENST00000548086 AMER1Q5JTC6 1135 aaPredicted RBP15.07■□□□□ 0
SCN8A-205ENST00000548086 KTN1Q86UP2 1357 aaKnown RBP15.07■□□□□ 0
SCN8A-205ENST00000548086 MON2Q7Z3U7 1717 aa15.07■□□□□ 0
SCN8A-205ENST00000548086 SUPT16HQ9Y5B9 1047 aaKnown RBP15.07■□□□□ 0
SCN8A-205ENST00000548086 CADPS2Q86UW7 1296 aa15.06■□□□□ 0
SCN8A-205ENST00000548086 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.06■□□□□ 0
SCN8A-205ENST00000548086 NGDNQ8NEJ9 315 aaKnown RBP15.06■□□□□ 0
SCN8A-205ENST00000548086 PRKRIP1Q9H875 184 aaPredicted RBP15.06■□□□□ 0
SCN8A-205ENST00000548086 PHF8Q9UPP1 1060 aa15.06■□□□□ 0
SCN8A-205ENST00000548086 POLR3AO14802 1390 aaPredicted RBP15.04■□□□□ -0
SCN8A-205ENST00000548086 USP6P35125 1406 aa15.04■□□□□ -0
SCN8A-205ENST00000548086 XPCQ01831 940 aaPredicted RBP15.04■□□□□ -0
SCN8A-205ENST00000548086 NRKQ7Z2Y5 1582 aa15.04■□□□□ -0
SCN8A-205ENST00000548086 DDX17Q92841 729 aaKnown RBP15.04■□□□□ -0
SCN8A-205ENST00000548086 CCER2I3L3R5 266 aa15.03■□□□□ -0
SCN8A-205ENST00000548086 FOXO3O43524 673 aa15.02■□□□□ -0
SCN8A-205ENST00000548086 GGNBP2Q9H3C7 697 aa15.02■□□□□ -0
SCN8A-205ENST00000548086 ZRANB1Q9UGI0 708 aa15.02■□□□□ -0
SCN8A-205ENST00000548086 CGNL1Q0VF96 1302 aa15.02■□□□□ -0
SCN8A-205ENST00000548086 EDC4Q6P2E9 1401 aaKnown RBP15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms