RNA–Protein interactions for RNA: ENST00000548015.1

KRT18-204, Transcript of keratin 18, humanhuman

TSL 2

Gene KRT18, Length 928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-204ENST00000548015 PLEKHH1Q9ULM0 1364 aa16.33■□□□□ 0.2
KRT18-204ENST00000548015 SHPRHQ149N8 1683 aa16.33■□□□□ 0.2
KRT18-204ENST00000548015 FOXO3O43524 673 aa16.32■□□□□ 0.2
KRT18-204ENST00000548015 RBM6P78332 1123 aaKnown RBP16.32■□□□□ 0.2
KRT18-204ENST00000548015 C14orf93Q9H972 538 aaKnown RBP16.32■□□□□ 0.2
KRT18-204ENST00000548015 TECPR2O15040 1411 aa16.31■□□□□ 0.2
KRT18-204ENST00000548015 NUTM2FA1L443 756 aa16.31■□□□□ 0.2
KRT18-204ENST00000548015 FNBP4Q8N3X1 1017 aaPredicted RBP16.31■□□□□ 0.2
KRT18-204ENST00000548015 XPCQ01831 940 aaPredicted RBP16.3■□□□□ 0.2
KRT18-204ENST00000548015 SIRT1Q96EB6 747 aa16.3■□□□□ 0.2
KRT18-204ENST00000548015 CDK12Q9NYV4 1490 aaPredicted RBP16.29■□□□□ 0.2
KRT18-204ENST00000548015 NPHP3Q7Z494 1330 aa16.29■□□□□ 0.2
KRT18-204ENST00000548015 NHSL1Q5SYE7 1610 aa16.29■□□□□ 0.2
KRT18-204ENST00000548015 PIK3C2GO75747 1445 aa16.28■□□□□ 0.2
KRT18-204ENST00000548015 SETD1AO15047 1707 aaKnown RBP16.28■□□□□ 0.2
KRT18-204ENST00000548015 NALCNQ8IZF0 1738 aa16.28■□□□□ 0.2
KRT18-204ENST00000548015 CFAP70Q5T0N1 1121 aa16.28■□□□□ 0.2
KRT18-204ENST00000548015 USP21Q9UK80 565 aa16.28■□□□□ 0.2
KRT18-204ENST00000548015 KIF1BO60333 1816 aa16.26■□□□□ 0.19
KRT18-204ENST00000548015 ACIN1Q9UKV3 1341 aaKnown RBP16.26■□□□□ 0.19
KRT18-204ENST00000548015 YTHDC2Q9H6S0 1430 aaKnown RBP16.26■□□□□ 0.19
KRT18-204ENST00000548015 TRPC5Q9UL62 973 aaPredicted RBP16.25■□□□□ 0.19
KRT18-204ENST00000548015 RGS12O14924 1447 aa16.25■□□□□ 0.19
KRT18-204ENST00000548015 LAMC1P11047 1609 aa16.23■□□□□ 0.19
KRT18-204ENST00000548015 MYOM2P54296 1465 aa16.23■□□□□ 0.19
KRT18-204ENST00000548015 PXDNQ92626 1479 aa16.23■□□□□ 0.19
KRT18-204ENST00000548015 RAB3GAP2Q9H2M9 1393 aa16.23■□□□□ 0.19
KRT18-204ENST00000548015 SPATA31A3Q5VYP0 1347 aa16.21■□□□□ 0.19
KRT18-204ENST00000548015 PPLO60437 1756 aa16.21■□□□□ 0.19
KRT18-204ENST00000548015 KRT28Q7Z3Y7 464 aa16.21■□□□□ 0.19
KRT18-204ENST00000548015 PRAM1Q96QH2 718 aa16.21■□□□□ 0.19
KRT18-204ENST00000548015 DHX57Q6P158 1386 aaKnown RBP16.21■□□□□ 0.19
KRT18-204ENST00000548015 NRXN1Q9ULB1 1477 aa16.21■□□□□ 0.19
KRT18-204ENST00000548015 CDC42BPGQ6DT37 1551 aa16.21■□□□□ 0.18
KRT18-204ENST00000548015 ATRNO75882 1429 aa16.2■□□□□ 0.18
KRT18-204ENST00000548015 SAFB2Q14151 953 aaKnown RBP eCLIP16.2■□□□□ 0.18
KRT18-204ENST00000548015 BCL9LQ86UU0 1499 aa16.2■□□□□ 0.18
KRT18-204ENST00000548015 PHF8Q9UPP1 1060 aa16.19■□□□□ 0.18
KRT18-204ENST00000548015 SRCAPQ6ZRS2 3230 aa16.18■□□□□ 0.18
KRT18-204ENST00000548015 GJD4Q96KN9 370 aaPredicted RBP16.17■□□□□ 0.18
KRT18-204ENST00000548015 HRCP23327 699 aa16.15■□□□□ 0.18
KRT18-204ENST00000548015 UNC5CLQ8IV45 518 aa16.15■□□□□ 0.18
KRT18-204ENST00000548015 CABLES1Q8TDN4 633 aa16.15■□□□□ 0.18
KRT18-204ENST00000548015 POGKQ9P215 609 aa16.15■□□□□ 0.18
KRT18-204ENST00000548015 TRAK1Q9UPV9 953 aa16.15■□□□□ 0.18
KRT18-204ENST00000548015 KDM2AQ9Y2K7 1162 aa16.15■□□□□ 0.18
KRT18-204ENST00000548015 PSME1Q06323 249 aa16.14■□□□□ 0.17
KRT18-204ENST00000548015 DCAF11Q8TEB1 546 aa16.14■□□□□ 0.17
KRT18-204ENST00000548015 PMFBP1Q8TBY8 1022 aa16.13■□□□□ 0.17
KRT18-204ENST00000548015 ATAD2Q6PL18 1390 aa16.13■□□□□ 0.17
KRT18-204ENST00000548015 HIRIP3Q9BW71 556 aaPredicted RBP16.12■□□□□ 0.17
KRT18-204ENST00000548015 SBNO1A3KN83 1393 aa16.12■□□□□ 0.17
KRT18-204ENST00000548015 COL22A1Q8NFW1 1626 aaPredicted RBP16.12■□□□□ 0.17
KRT18-204ENST00000548015 ADRA2BP18089 450 aa16.11■□□□□ 0.17
KRT18-204ENST00000548015 PRR36Q9H6K5 1346 aa16.11■□□□□ 0.17
KRT18-204ENST00000548015 SLIT2O94813 1529 aa16.1■□□□□ 0.17
KRT18-204ENST00000548015 PLEKHG5O94827 1062 aa16.1■□□□□ 0.17
KRT18-204ENST00000548015 STAC3Q96MF2 364 aa16.1■□□□□ 0.17
KRT18-204ENST00000548015 FAM83GA6ND36 823 aa16.09■□□□□ 0.17
KRT18-204ENST00000548015 LMOD2Q6P5Q4 547 aa16.09■□□□□ 0.17
KRT18-204ENST00000548015 MINK1Q8N4C8 1332 aaPredicted RBP16.09■□□□□ 0.17
KRT18-204ENST00000548015 TNS3Q68CZ2 1445 aa16.09■□□□□ 0.17
KRT18-204ENST00000548015 ADGRB1O14514 1584 aa16.09■□□□□ 0.17
KRT18-204ENST00000548015 IFT172Q9UG01 1749 aa16.08■□□□□ 0.17
KRT18-204ENST00000548015 WASLO00401 505 aaPredicted RBP16.08■□□□□ 0.16
KRT18-204ENST00000548015 VPS72Q15906 364 aa16.07■□□□□ 0.16
KRT18-204ENST00000548015 ANKARQ7Z5J8 1434 aa16.07■□□□□ 0.16
KRT18-204ENST00000548015 DLC1Q96QB1 1528 aa16.07■□□□□ 0.16
KRT18-204ENST00000548015 RALGAPBQ86X10 1494 aa16.06■□□□□ 0.16
KRT18-204ENST00000548015 ONECUT3O60422 494 aaPredicted RBP16.06■□□□□ 0.16
KRT18-204ENST00000548015 HAP1P54257 671 aaPredicted RBP16.06■□□□□ 0.16
KRT18-204ENST00000548015 KNDC1Q76NI1 1749 aa16.05■□□□□ 0.16
KRT18-204ENST00000548015 ARHGEF10O15013 1369 aa16.05■□□□□ 0.16
KRT18-204ENST00000548015 CCDC125Q86Z20 511 aa16.05■□□□□ 0.16
KRT18-204ENST00000548015 SEPT12Q8IYM1 358 aa16.05■□□□□ 0.16
KRT18-204ENST00000548015 EP400Q96L91 3159 aa16.05■□□□□ 0.16
KRT18-204ENST00000548015 PIAS4Q8N2W9 510 aaPredicted RBP16.04■□□□□ 0.16
KRT18-204ENST00000548015 FMN2Q9NZ56 1722 aa16.04■□□□□ 0.16
KRT18-204ENST00000548015 GPRASP1Q5JY77 1395 aa16.01■□□□□ 0.15
KRT18-204ENST00000548015 NGDNQ8NEJ9 315 aaKnown RBP16.01■□□□□ 0.15
KRT18-204ENST00000548015 NUDT16Q96DE0 195 aaKnown RBP16.01■□□□□ 0.15
KRT18-204ENST00000548015 CCDC9Q9Y3X0 531 aaKnown RBP16■□□□□ 0.15
KRT18-204ENST00000548015 KIF1AQ12756 1690 aa15.99■□□□□ 0.15
KRT18-204ENST00000548015 NBPF1Q3BBV0 1214 aa15.99■□□□□ 0.15
KRT18-204ENST00000548015 CDK19Q9BWU1 502 aa15.99■□□□□ 0.15
KRT18-204ENST00000548015 BTG4Q9NY30 223 aa15.99■□□□□ 0.15
KRT18-204ENST00000548015 ZRANB1Q9UGI0 708 aa15.99■□□□□ 0.15
KRT18-204ENST00000548015 EIF3AQ14152 1382 aaKnown RBP15.99■□□□□ 0.15
KRT18-204ENST00000548015 MSH5O43196 834 aa15.98■□□□□ 0.15
KRT18-204ENST00000548015 GLI3P10071 1580 aa15.98■□□□□ 0.15
KRT18-204ENST00000548015 DEFB132Q7Z7B7 95 aa15.98■□□□□ 0.15
KRT18-204ENST00000548015 PAK3O75914 559 aaPredicted RBP15.97■□□□□ 0.15
KRT18-204ENST00000548015 KRT27Q7Z3Y8 459 aa15.97■□□□□ 0.15
KRT18-204ENST00000548015 ADGRB2O60241 1585 aa15.96■□□□□ 0.15
KRT18-204ENST00000548015 FAM98CQ17RN3 349 aaKnown RBP15.96■□□□□ 0.15
KRT18-204ENST00000548015 USP32Q8NFA0 1604 aa15.96■□□□□ 0.15
KRT18-204ENST00000548015 BLMP54132 1417 aaPredicted RBP15.95■□□□□ 0.14
KRT18-204ENST00000548015 TULP4Q9NRJ4 1543 aa15.95■□□□□ 0.14
KRT18-204ENST00000548015 PLEKHG3A1L390 1219 aa15.95■□□□□ 0.14
KRT18-204ENST00000548015 NBPF8Q3BBV2 869 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms