RNA–Protein interactions for RNA: ENST00000547853.1

CDK4-205, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-205ENST00000547853 FNBP4Q8N3X1 1017 aaPredicted RBP14.46□□□□□ -0.09
CDK4-205ENST00000547853 SOS2Q07890 1332 aaPredicted RBP14.45□□□□□ -0.1
CDK4-205ENST00000547853 PRAG1Q86YV5 1406 aa14.45□□□□□ -0.1
CDK4-205ENST00000547853 BLMP54132 1417 aaPredicted RBP14.44□□□□□ -0.1
CDK4-205ENST00000547853 CLTCL1P53675 1640 aa14.44□□□□□ -0.1
CDK4-205ENST00000547853 PXDNQ92626 1479 aa14.44□□□□□ -0.1
CDK4-205ENST00000547853 CDC42BPGQ6DT37 1551 aa14.43□□□□□ -0.1
CDK4-205ENST00000547853 CCDC125Q86Z20 511 aa14.43□□□□□ -0.1
CDK4-205ENST00000547853 PLCH1Q4KWH8 1693 aa14.42□□□□□ -0.1
CDK4-205ENST00000547853 USP32Q8NFA0 1604 aa14.41□□□□□ -0.1
CDK4-205ENST00000547853 ABCA3Q99758 1704 aa14.41□□□□□ -0.1
CDK4-205ENST00000547853 CENPBP07199 599 aaPredicted RBP14.41□□□□□ -0.1
CDK4-205ENST00000547853 KIF1BO60333 1816 aa14.41□□□□□ -0.1
CDK4-205ENST00000547853 RALGAPBQ86X10 1494 aa14.4□□□□□ -0.1
CDK4-205ENST00000547853 NWD2Q9ULI1 1742 aa14.38□□□□□ -0.11
CDK4-205ENST00000547853 SLIT2O94813 1529 aa14.38□□□□□ -0.11
CDK4-205ENST00000547853 ROBO2Q9HCK4 1378 aa14.36□□□□□ -0.11
CDK4-205ENST00000547853 ACIN1Q9UKV3 1341 aaKnown RBP14.36□□□□□ -0.11
CDK4-205ENST00000547853 RGPD1P0DJD0 1748 aa14.35□□□□□ -0.11
CDK4-205ENST00000547853 TNS1Q9HBL0 1735 aaKnown RBP14.35□□□□□ -0.11
CDK4-205ENST00000547853 PPLO60437 1756 aa14.35□□□□□ -0.11
CDK4-205ENST00000547853 ORAI2Q96SN7 254 aa14.35□□□□□ -0.11
CDK4-205ENST00000547853 KIF1AQ12756 1690 aa14.35□□□□□ -0.11
CDK4-205ENST00000547853 DIEXFQ68CQ4 756 aaKnown RBP14.34□□□□□ -0.11
CDK4-205ENST00000547853 DEFB132Q7Z7B7 95 aa14.34□□□□□ -0.11
CDK4-205ENST00000547853 GJD4Q96KN9 370 aaPredicted RBP14.34□□□□□ -0.11
CDK4-205ENST00000547853 NRAPQ86VF7 1730 aa14.34□□□□□ -0.11
CDK4-205ENST00000547853 ROCK1Q13464 1354 aa14.34□□□□□ -0.11
CDK4-205ENST00000547853 FMN2Q9NZ56 1722 aa14.33□□□□□ -0.12
CDK4-205ENST00000547853 KNDC1Q76NI1 1749 aa14.32□□□□□ -0.12
CDK4-205ENST00000547853 HFM1A2PYH4 1435 aa14.32□□□□□ -0.12
CDK4-205ENST00000547853 IFT172Q9UG01 1749 aa14.3□□□□□ -0.12
CDK4-205ENST00000547853 NPHP3Q7Z494 1330 aa14.3□□□□□ -0.12
CDK4-205ENST00000547853 NUP155O75694 1391 aa14.3□□□□□ -0.12
CDK4-205ENST00000547853 FAM50AQ14320 339 aaKnown RBP14.29□□□□□ -0.12
CDK4-205ENST00000547853 RGPD8O14715 1765 aaPredicted RBP14.27□□□□□ -0.12
CDK4-205ENST00000547853 ZNF316A6NFI3 1004 aaPredicted RBP14.27□□□□□ -0.13
CDK4-205ENST00000547853 ZNF326Q5BKZ1 582 aaKnown RBP14.27□□□□□ -0.13
CDK4-205ENST00000547853 CLSPNQ9HAW4 1339 aa14.26□□□□□ -0.13
CDK4-205ENST00000547853 PSDA5PKW4 1024 aaPredicted RBP14.26□□□□□ -0.13
CDK4-205ENST00000547853 UNC5CLQ8IV45 518 aa14.26□□□□□ -0.13
CDK4-205ENST00000547853 THSD7AQ9UPZ6 1657 aa14.25□□□□□ -0.13
CDK4-205ENST00000547853 NAIPQ13075 1403 aa14.24□□□□□ -0.13
CDK4-205ENST00000547853 RREB1Q92766 1687 aa14.24□□□□□ -0.13
CDK4-205ENST00000547853 XPCQ01831 940 aaPredicted RBP14.24□□□□□ -0.13
CDK4-205ENST00000547853 APLP2Q06481 763 aa14.24□□□□□ -0.13
CDK4-205ENST00000547853 CCDC144AA2RUR9 1427 aa14.24□□□□□ -0.13
CDK4-205ENST00000547853 ADGRB2O60241 1585 aa14.23□□□□□ -0.13
CDK4-205ENST00000547853 SF3B2Q13435 895 aaKnown RBP14.23□□□□□ -0.13
CDK4-205ENST00000547853 DISP2A7MBM2 1401 aa14.23□□□□□ -0.13
CDK4-205ENST00000547853 TECPR2O15040 1411 aa14.23□□□□□ -0.13
CDK4-205ENST00000547853 NUP188Q5SRE5 1749 aa14.22□□□□□ -0.13
CDK4-205ENST00000547853 CRYBG1Q9Y4K1 1723 aa14.22□□□□□ -0.13
CDK4-205ENST00000547853 SEPT12Q8IYM1 358 aa14.22□□□□□ -0.13
CDK4-205ENST00000547853 TNS3Q68CZ2 1445 aa14.22□□□□□ -0.13
CDK4-205ENST00000547853 ESCO1Q5FWF5 840 aa14.21□□□□□ -0.13
CDK4-205ENST00000547853 LRPPRCP42704 1394 aaKnown RBP14.21□□□□□ -0.14
CDK4-205ENST00000547853 SPATA31A3Q5VYP0 1347 aa14.2□□□□□ -0.14
CDK4-205ENST00000547853 FOXO3O43524 673 aa14.2□□□□□ -0.14
CDK4-205ENST00000547853 MYT1Q01538 1121 aa14.2□□□□□ -0.14
CDK4-205ENST00000547853 TRPM3Q9HCF6 1732 aaPredicted RBP14.2□□□□□ -0.14
CDK4-205ENST00000547853 VPS72Q15906 364 aa14.19□□□□□ -0.14
CDK4-205ENST00000547853 COL14A1Q05707 1796 aaKnown RBP14.19□□□□□ -0.14
CDK4-205ENST00000547853 ONECUT3O60422 494 aaPredicted RBP14.18□□□□□ -0.14
CDK4-205ENST00000547853 BAG6P46379 1132 aa14.18□□□□□ -0.14
CDK4-205ENST00000547853 KRT27Q7Z3Y8 459 aa14.18□□□□□ -0.14
CDK4-205ENST00000547853 ALS2Q96Q42 1657 aa14.17□□□□□ -0.14
CDK4-205ENST00000547853 NEUROD1Q13562 356 aa14.16□□□□□ -0.14
CDK4-205ENST00000547853 CAMTA1Q9Y6Y1 1673 aa14.14□□□□□ -0.15
CDK4-205ENST00000547853 NRXN1Q9ULB1 1477 aa14.14□□□□□ -0.15
CDK4-205ENST00000547853 PLEKHH1Q9ULM0 1364 aa14.14□□□□□ -0.15
CDK4-205ENST00000547853 R3HDM1Q15032 1099 aaKnown RBP14.13□□□□□ -0.15
CDK4-205ENST00000547853 VGFO15240 615 aaPredicted RBP14.12□□□□□ -0.15
CDK4-205ENST00000547853 EN1Q05925 392 aaPredicted RBP14.12□□□□□ -0.15
CDK4-205ENST00000547853 NUTM2FA1L443 756 aa14.11□□□□□ -0.15
CDK4-205ENST00000547853 RRBP1Q9P2E9 1410 aaKnown RBP14.11□□□□□ -0.15
CDK4-205ENST00000547853 SBNO1A3KN83 1393 aa14.1□□□□□ -0.15
CDK4-205ENST00000547853 YY1P25490 414 aa14.1□□□□□ -0.15
CDK4-205ENST00000547853 CABLES1Q8TDN4 633 aa14.1□□□□□ -0.15
CDK4-205ENST00000547853 CCDC9Q9Y3X0 531 aaKnown RBP14.1□□□□□ -0.15
CDK4-205ENST00000547853 RPGRIP1LQ68CZ1 1315 aa14.1□□□□□ -0.15
CDK4-205ENST00000547853 ARHGEF10O15013 1369 aa14.09□□□□□ -0.15
CDK4-205ENST00000547853 PHRF1Q9P1Y6 1649 aaKnown RBP14.08□□□□□ -0.15
CDK4-205ENST00000547853 PIK3C2GO75747 1445 aa14.08□□□□□ -0.15
CDK4-205ENST00000547853 FAM98CQ17RN3 349 aaKnown RBP14.08□□□□□ -0.16
CDK4-205ENST00000547853 RGPD3A6NKT7 1758 aaPredicted RBP14.08□□□□□ -0.16
CDK4-205ENST00000547853 RGPD4Q7Z3J3 1758 aa14.08□□□□□ -0.16
CDK4-205ENST00000547853 ABCC11Q96J66 1382 aa14.08□□□□□ -0.16
CDK4-205ENST00000547853 CASZ1Q86V15 1759 aa14.07□□□□□ -0.16
CDK4-205ENST00000547853 A0A0G2JS52 829 aa14.07□□□□□ -0.16
CDK4-205ENST00000547853 KRT28Q7Z3Y7 464 aa14.07□□□□□ -0.16
CDK4-205ENST00000547853 WAPLQ7Z5K2 1190 aa14.07□□□□□ -0.16
CDK4-205ENST00000547853 GTF3C3Q9Y5Q9 886 aa14.07□□□□□ -0.16
CDK4-205ENST00000547853 PARD3Q8TEW0 1356 aa14.07□□□□□ -0.16
CDK4-205ENST00000547853 HAP1P54257 671 aaPredicted RBP14.06□□□□□ -0.16
CDK4-205ENST00000547853 FAM182BQ5T319 152 aa14.06□□□□□ -0.16
CDK4-205ENST00000547853 YTHDC2Q9H6S0 1430 aaKnown RBP14.06□□□□□ -0.16
CDK4-205ENST00000547853 EZH2Q15910 746 aaKnown RBP14.05□□□□□ -0.16
CDK4-205ENST00000547853 SPATA31E1Q6ZUB1 1445 aa14.05□□□□□ -0.16
CDK4-205ENST00000547853 FAM83GA6ND36 823 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms