RNA–Protein interactions for RNA: ENST00000547685.5

MMP19-205, Transcript of matrix metallopeptidase 19, humanhuman

TSL 2

Gene MMP19, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19-205ENST00000547685 PPP2R1AP30153 589 aa17.38■□□□□ 0.37
MMP19-205ENST00000547685 SMC5Q8IY18 1101 aa17.38■□□□□ 0.37
MMP19-205ENST00000547685 C22orf23Q9BZE7 217 aa17.38■□□□□ 0.37
MMP19-205ENST00000547685 SYNMO15061 1565 aa17.38■□□□□ 0.37
MMP19-205ENST00000547685 PREX2Q70Z35 1606 aa17.38■□□□□ 0.37
MMP19-205ENST00000547685 TESK2Q96S53 571 aa17.38■□□□□ 0.37
MMP19-205ENST00000547685 NUP155O75694 1391 aa17.38■□□□□ 0.37
MMP19-205ENST00000547685 RIPK4P57078 832 aa17.37■□□□□ 0.37
MMP19-205ENST00000547685 CLEC17AQ6ZS10 378 aa17.37■□□□□ 0.37
MMP19-205ENST00000547685 SAMD9LQ8IVG5 1584 aa17.37■□□□□ 0.37
MMP19-205ENST00000547685 PLEKHG5O94827 1062 aa17.37■□□□□ 0.37
MMP19-205ENST00000547685 MAP3K4Q9Y6R4 1608 aa17.36■□□□□ 0.37
MMP19-205ENST00000547685 CCDC141Q6ZP82 1450 aa17.36■□□□□ 0.37
MMP19-205ENST00000547685 PPRC1Q5VV67 1664 aaKnown RBP17.36■□□□□ 0.37
MMP19-205ENST00000547685 CDCA8Q53HL2 280 aa17.36■□□□□ 0.37
MMP19-205ENST00000547685 GOLGA6L22H0YM25 854 aa17.35■□□□□ 0.37
MMP19-205ENST00000547685 ARXQ96QS3 562 aa17.35■□□□□ 0.37
MMP19-205ENST00000547685 NASPP49321 788 aaPredicted RBP17.35■□□□□ 0.37
MMP19-205ENST00000547685 ASXL1Q8IXJ9 1541 aa17.35■□□□□ 0.37
MMP19-205ENST00000547685 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.35■□□□□ 0.37
MMP19-205ENST00000547685 FGD1P98174 961 aa17.34■□□□□ 0.37
MMP19-205ENST00000547685 RAB3GAP1Q15042 981 aa17.34■□□□□ 0.37
MMP19-205ENST00000547685 DISP3Q9P2K9 1392 aa17.34■□□□□ 0.37
MMP19-205ENST00000547685 RNF17Q9BXT8 1623 aaKnown RBP17.34■□□□□ 0.37
MMP19-205ENST00000547685 NOL7Q9UMY1 257 aaKnown RBP17.33■□□□□ 0.37
MMP19-205ENST00000547685 KNSTRNQ9Y448 316 aa17.33■□□□□ 0.37
MMP19-205ENST00000547685 RBM25P49756 843 aaKnown RBP17.32■□□□□ 0.36
MMP19-205ENST00000547685 NCBP3Q53F19 620 aaKnown RBP17.32■□□□□ 0.36
MMP19-205ENST00000547685 CD109Q6YHK3 1445 aa17.32■□□□□ 0.36
MMP19-205ENST00000547685 CANXP27824 592 aaKnown RBP17.31■□□□□ 0.36
MMP19-205ENST00000547685 TNNT2P45379 298 aaPredicted RBP17.31■□□□□ 0.36
MMP19-205ENST00000547685 PDZRN3Q9UPQ7 1066 aa17.31■□□□□ 0.36
MMP19-205ENST00000547685 BCAR3O75815 825 aa17.31■□□□□ 0.36
MMP19-205ENST00000547685 KDM2AQ9Y2K7 1162 aa17.3■□□□□ 0.36
MMP19-205ENST00000547685 ZNF445P59923 1031 aa17.3■□□□□ 0.36
MMP19-205ENST00000547685 KLHL40Q2TBA0 621 aa17.3■□□□□ 0.36
MMP19-205ENST00000547685 GAS2L3Q86XJ1 694 aa17.3■□□□□ 0.36
MMP19-205ENST00000547685 TNPO1Q92973 898 aaKnown RBP17.3■□□□□ 0.36
MMP19-205ENST00000547685 DMTNQ08495 405 aa17.29■□□□□ 0.36
MMP19-205ENST00000547685 FAM135AQ9P2D6 1515 aa17.29■□□□□ 0.36
MMP19-205ENST00000547685 C9orf84Q5VXU9 1444 aa17.28■□□□□ 0.36
MMP19-205ENST00000547685 AMER1Q5JTC6 1135 aaPredicted RBP17.28■□□□□ 0.36
MMP19-205ENST00000547685 GTPBP4Q9BZE4 634 aaKnown RBP17.28■□□□□ 0.36
MMP19-205ENST00000547685 HNRNPMP52272 730 aaKnown RBP eCLIP17.28■□□□□ 0.36
MMP19-205ENST00000547685 PDLIM2Q96JY6 352 aa17.28■□□□□ 0.36
MMP19-205ENST00000547685 MYO5CQ9NQX4 1742 aa17.27■□□□□ 0.36
MMP19-205ENST00000547685 SYCP2Q9BX26 1530 aa17.27■□□□□ 0.36
MMP19-205ENST00000547685 KIF20AO95235 890 aa17.27■□□□□ 0.36
MMP19-205ENST00000547685 SASS6Q6UVJ0 657 aa17.27■□□□□ 0.36
MMP19-205ENST00000547685 CCDC94Q9BW85 323 aaPredicted RBP17.27■□□□□ 0.36
MMP19-205ENST00000547685 KANK1Q14678 1352 aa17.27■□□□□ 0.36
MMP19-205ENST00000547685 ARHGEF5Q12774 1597 aa17.27■□□□□ 0.35
MMP19-205ENST00000547685 COG6Q9Y2V7 657 aa17.26■□□□□ 0.35
MMP19-205ENST00000547685 ABCA9Q8IUA7 1624 aa17.26■□□□□ 0.35
MMP19-205ENST00000547685 MAGI2Q86UL8 1455 aa17.26■□□□□ 0.35
MMP19-205ENST00000547685 FAM13BQ9NYF5 915 aa17.26■□□□□ 0.35
MMP19-205ENST00000547685 UQCRHLA0A096LP55 91 aa17.25■□□□□ 0.35
MMP19-205ENST00000547685 UQCRHP07919 91 aa17.25■□□□□ 0.35
MMP19-205ENST00000547685 ARHGAP5Q13017 1502 aa17.25■□□□□ 0.35
MMP19-205ENST00000547685 A2MP01023 1474 aa17.25■□□□□ 0.35
MMP19-205ENST00000547685 TAF3Q5VWG9 929 aa17.25■□□□□ 0.35
MMP19-205ENST00000547685 KIF16BQ96L93 1317 aa17.24■□□□□ 0.35
MMP19-205ENST00000547685 ATP10AO60312 1499 aa17.24■□□□□ 0.35
MMP19-205ENST00000547685 STAC3Q96MF2 364 aa17.24■□□□□ 0.35
MMP19-205ENST00000547685 R3HCC1Q9Y3T6 440 aaKnown RBP17.24■□□□□ 0.35
MMP19-205ENST00000547685 IQGAP1P46940 1657 aa17.23■□□□□ 0.35
MMP19-205ENST00000547685 CT47B1P0C2W7 299 aaPredicted RBP17.23■□□□□ 0.35
MMP19-205ENST00000547685 HDAC1Q13547 482 aaPredicted RBP17.23■□□□□ 0.35
MMP19-205ENST00000547685 ZKSCAN5Q9Y2L8 839 aa17.23■□□□□ 0.35
MMP19-205ENST00000547685 APAF1O14727 1248 aa17.22■□□□□ 0.35
MMP19-205ENST00000547685 PANK1Q8TE04 598 aa17.22■□□□□ 0.35
MMP19-205ENST00000547685 HSP90AB1P08238 724 aaKnown RBP17.21■□□□□ 0.35
MMP19-205ENST00000547685 CCDC39Q9UFE4 941 aa17.21■□□□□ 0.35
MMP19-205ENST00000547685 PCDHB15Q9Y5E8 787 aa17.21■□□□□ 0.35
MMP19-205ENST00000547685 LETM1O95202 739 aaPredicted RBP17.21■□□□□ 0.35
MMP19-205ENST00000547685 RARSP54136 660 aaKnown RBP17.21■□□□□ 0.35
MMP19-205ENST00000547685 UNC13BO14795 1591 aa17.2■□□□□ 0.34
MMP19-205ENST00000547685 REREQ9P2R6 1566 aa17.2■□□□□ 0.34
MMP19-205ENST00000547685 WDR63Q8IWG1 891 aa17.2■□□□□ 0.34
MMP19-205ENST00000547685 SPRYD3Q8NCJ5 442 aa17.2■□□□□ 0.34
MMP19-205ENST00000547685 SPINK5Q9NQ38 1064 aaPredicted RBP17.2■□□□□ 0.34
MMP19-205ENST00000547685 MFAP1P55081 439 aaKnown RBP17.2■□□□□ 0.34
MMP19-205ENST00000547685 HMGN5P82970 282 aaKnown RBP17.19■□□□□ 0.34
MMP19-205ENST00000547685 CFAP44Q96MT7 982 aa17.19■□□□□ 0.34
MMP19-205ENST00000547685 POLR3AO14802 1390 aaPredicted RBP17.19■□□□□ 0.34
MMP19-205ENST00000547685 YEATS2Q9ULM3 1422 aa17.19■□□□□ 0.34
MMP19-205ENST00000547685 NBPF1Q3BBV0 1214 aa17.18■□□□□ 0.34
MMP19-205ENST00000547685 PRIMPOLQ96LW4 560 aa17.18■□□□□ 0.34
MMP19-205ENST00000547685 MVPQ14764 893 aaKnown RBP17.17■□□□□ 0.34
MMP19-205ENST00000547685 CCDC27Q2M243 656 aa17.17■□□□□ 0.34
MMP19-205ENST00000547685 WWC1Q8IX03 1113 aa17.17■□□□□ 0.34
MMP19-205ENST00000547685 TSPY4P0CV99 314 aa17.16■□□□□ 0.34
MMP19-205ENST00000547685 TSPY10P0CW01 314 aa17.16■□□□□ 0.34
MMP19-205ENST00000547685 DDX49Q9Y6V7 483 aaKnown RBP17.16■□□□□ 0.34
MMP19-205ENST00000547685 A0A0U1RQG5 324 aaPredicted RBP17.16■□□□□ 0.34
MMP19-205ENST00000547685 NUCB2P80303 420 aa17.16■□□□□ 0.34
MMP19-205ENST00000547685 RSPH4AQ5TD94 716 aa17.16■□□□□ 0.34
MMP19-205ENST00000547685 MYOM1P52179 1685 aa17.15■□□□□ 0.34
MMP19-205ENST00000547685 K7ELQ4 463 aaPredicted RBP17.15■□□□□ 0.34
MMP19-205ENST00000547685 ZSCAN20P17040 1043 aaPredicted RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms