RNA–Protein interactions for RNA: ENST00000547605.5

RBFOX1-210, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best)

Gene RBFOX1, Length 1,811 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-210ENST00000547605 CHD2O14647 1828 aaKnown RBP30.41■■■□□ 2.46
RBFOX1-210ENST00000547605 KCNA6P17658 529 aa30.41■■■□□ 2.46
RBFOX1-210ENST00000547605 XRN1Q8IZH2 1706 aaKnown RBP30.4■■■□□ 2.46
RBFOX1-210ENST00000547605 PTCH1Q13635 1447 aa30.39■■■□□ 2.46
RBFOX1-210ENST00000547605 TULP4Q9NRJ4 1543 aa30.39■■■□□ 2.46
RBFOX1-210ENST00000547605 STRCQ7RTU9 1775 aa30.38■■■□□ 2.45
RBFOX1-210ENST00000547605 SRPK2P78362 688 aaKnown RBP30.37■■■□□ 2.45
RBFOX1-210ENST00000547605 CABP2Q9NPB3 220 aa30.35■■■□□ 2.45
RBFOX1-210ENST00000547605 CDK19Q9BWU1 502 aa30.33■■■□□ 2.45
RBFOX1-210ENST00000547605 PUS7Q96PZ0 661 aaKnown RBP30.31■■■□□ 2.44
RBFOX1-210ENST00000547605 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.3■■■□□ 2.44
RBFOX1-210ENST00000547605 TMC1Q8TDI8 760 aa30.29■■■□□ 2.44
RBFOX1-210ENST00000547605 WASLO00401 505 aaPredicted RBP30.29■■■□□ 2.44
RBFOX1-210ENST00000547605 PANK3Q9H999 370 aa30.29■■■□□ 2.44
RBFOX1-210ENST00000547605 MYOM1P52179 1685 aa30.28■■■□□ 2.44
RBFOX1-210ENST00000547605 MIER1Q8N108 512 aa30.27■■■□□ 2.44
RBFOX1-210ENST00000547605 ANP32CO43423 234 aa30.26■■■□□ 2.43
RBFOX1-210ENST00000547605 NWD1Q149M9 1564 aa30.26■■■□□ 2.43
RBFOX1-210ENST00000547605 ATAD2Q6PL18 1390 aa30.25■■■□□ 2.43
RBFOX1-210ENST00000547605 ADGRB2O60241 1585 aa30.23■■■□□ 2.43
RBFOX1-210ENST00000547605 RBM33Q96EV2 1170 aaKnown RBP30.22■■■□□ 2.43
RBFOX1-210ENST00000547605 SLC12A5Q9H2X9 1139 aa30.22■■■□□ 2.43
RBFOX1-210ENST00000547605 PROSER2Q86WR7 435 aaPredicted RBP30.22■■■□□ 2.43
RBFOX1-210ENST00000547605 DMRT2Q9Y5R5 561 aa30.21■■■□□ 2.43
RBFOX1-210ENST00000547605 C14orf37Q86TY3 774 aa30.19■■■□□ 2.42
RBFOX1-210ENST00000547605 NKTRP30414 1462 aaKnown RBP30.18■■■□□ 2.42
RBFOX1-210ENST00000547605 CNGB1Q14028 1251 aaPredicted RBP30.17■■■□□ 2.42
RBFOX1-210ENST00000547605 NINLQ9Y2I6 1382 aa30.16■■■□□ 2.42
RBFOX1-210ENST00000547605 NUDT16Q96DE0 195 aaKnown RBP30.16■■■□□ 2.42
RBFOX1-210ENST00000547605 STRCP1A6NGW2 1772 aa30.15■■■□□ 2.42
RBFOX1-210ENST00000547605 NUTM2FA1L443 756 aa30.15■■■□□ 2.42
RBFOX1-210ENST00000547605 PER1O15534 1290 aaPredicted RBP30.15■■■□□ 2.42
RBFOX1-210ENST00000547605 KNSTRNQ9Y448 316 aa30.15■■■□□ 2.42
RBFOX1-210ENST00000547605 NALCNQ8IZF0 1738 aa30.14■■■□□ 2.41
RBFOX1-210ENST00000547605 CABP1Q9NZU7 370 aa30.13■■■□□ 2.41
RBFOX1-210ENST00000547605 AEBP2Q6ZN18 517 aaPredicted RBP30.12■■■□□ 2.41
RBFOX1-210ENST00000547605 CCDC61Q9Y6R9 512 aa30.11■■■□□ 2.41
RBFOX1-210ENST00000547605 ADGRL3Q9HAR2 1447 aa30.11■■■□□ 2.41
RBFOX1-210ENST00000547605 ZNF335Q9H4Z2 1342 aaPredicted RBP30.1■■■□□ 2.41
RBFOX1-210ENST00000547605 PPIP5K1Q6PFW1 1433 aa30.09■■■□□ 2.41
RBFOX1-210ENST00000547605 ANKRD36BQ8N2N9 1353 aa30.09■■■□□ 2.41
RBFOX1-210ENST00000547605 PRR36Q9H6K5 1346 aa30.09■■■□□ 2.41
RBFOX1-210ENST00000547605 TERF2IPQ9NYB0 399 aa30.09■■■□□ 2.41
RBFOX1-210ENST00000547605 ATP7BP35670 1465 aa30.09■■■□□ 2.41
RBFOX1-210ENST00000547605 CARD14Q9BXL6 1004 aa30.08■■■□□ 2.41
RBFOX1-210ENST00000547605 PRKRIP1Q9H875 184 aaPredicted RBP30.08■■■□□ 2.41
RBFOX1-210ENST00000547605 HDGFL2Q7Z4V5 671 aaPredicted RBP30.07■■■□□ 2.4
RBFOX1-210ENST00000547605 TMEM94Q12767 1356 aa30.07■■■□□ 2.4
RBFOX1-210ENST00000547605 CDC42BPGQ6DT37 1551 aa30.06■■■□□ 2.4
RBFOX1-210ENST00000547605 A0A1W2PP64 1363 aa30.05■■■□□ 2.4
RBFOX1-210ENST00000547605 CC2D1BQ5T0F9 858 aaKnown RBP30.04■■■□□ 2.4
RBFOX1-210ENST00000547605 NSD3Q9BZ95 1437 aa30.04■■■□□ 2.4
RBFOX1-210ENST00000547605 FMN2Q9NZ56 1722 aa30.03■■■□□ 2.4
RBFOX1-210ENST00000547605 KTN1Q86UP2 1357 aaKnown RBP30.03■■■□□ 2.4
RBFOX1-210ENST00000547605 C19orf44Q9H6X5 657 aa30.01■■■□□ 2.4
RBFOX1-210ENST00000547605 USP32Q8NFA0 1604 aa30.01■■■□□ 2.39
RBFOX1-210ENST00000547605 NCOA3Q9Y6Q9 1424 aa30■■■□□ 2.39
RBFOX1-210ENST00000547605 CD163L1Q9NR16 1453 aa30■■■□□ 2.39
RBFOX1-210ENST00000547605 RGPD8O14715 1765 aaPredicted RBP30■■■□□ 2.39
RBFOX1-210ENST00000547605 ANKARQ7Z5J8 1434 aa30■■■□□ 2.39
RBFOX1-210ENST00000547605 TOPAZ1Q8N9V7 1692 aa29.99■■■□□ 2.39
RBFOX1-210ENST00000547605 AMER1Q5JTC6 1135 aaPredicted RBP29.99■■■□□ 2.39
RBFOX1-210ENST00000547605 ITSN1Q15811 1721 aa29.99■■■□□ 2.39
RBFOX1-210ENST00000547605 RALBP1Q15311 655 aa29.96■■■□□ 2.39
RBFOX1-210ENST00000547605 PLEKHG3A1L390 1219 aa29.96■■■□□ 2.39
RBFOX1-210ENST00000547605 LRRC7Q96NW7 1537 aa29.95■■■□□ 2.39
RBFOX1-210ENST00000547605 ATF3P18847 181 aa29.95■■■□□ 2.39
RBFOX1-210ENST00000547605 PMFBP1Q8TBY8 1022 aa29.95■■■□□ 2.39
RBFOX1-210ENST00000547605 CGNL1Q0VF96 1302 aa29.95■■■□□ 2.38
RBFOX1-210ENST00000547605 ACEP12821 1306 aa29.94■■■□□ 2.38
RBFOX1-210ENST00000547605 MSH6P52701 1360 aa29.94■■■□□ 2.38
RBFOX1-210ENST00000547605 CPSF1Q10570 1443 aaKnown RBP29.94■■■□□ 2.38
RBFOX1-210ENST00000547605 ZNF692Q9BU19 519 aaPredicted RBP29.93■■■□□ 2.38
RBFOX1-210ENST00000547605 NPC1L1Q9UHC9 1359 aa29.93■■■□□ 2.38
RBFOX1-210ENST00000547605 CCER2I3L3R5 266 aa29.92■■■□□ 2.38
RBFOX1-210ENST00000547605 NGDNQ8NEJ9 315 aaKnown RBP29.92■■■□□ 2.38
RBFOX1-210ENST00000547605 XIRP1Q702N8 1843 aaKnown RBP29.91■■■□□ 2.38
RBFOX1-210ENST00000547605 PARD3Q8TEW0 1356 aa29.91■■■□□ 2.38
RBFOX1-210ENST00000547605 AKAP12Q02952 1782 aa29.9■■■□□ 2.38
RBFOX1-210ENST00000547605 ESCO1Q5FWF5 840 aa29.89■■■□□ 2.38
RBFOX1-210ENST00000547605 DCCP43146 1447 aa29.89■■■□□ 2.38
RBFOX1-210ENST00000547605 CADPS2Q86UW7 1296 aa29.88■■■□□ 2.37
RBFOX1-210ENST00000547605 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.88■■■□□ 2.37
RBFOX1-210ENST00000547605 PHF8Q9UPP1 1060 aa29.87■■■□□ 2.37
RBFOX1-210ENST00000547605 EDC4Q6P2E9 1401 aaKnown RBP29.87■■■□□ 2.37
RBFOX1-210ENST00000547605 MON2Q7Z3U7 1717 aa29.86■■■□□ 2.37
RBFOX1-210ENST00000547605 MYBBP1AQ9BQG0 1328 aaKnown RBP29.86■■■□□ 2.37
RBFOX1-210ENST00000547605 POLR3AO14802 1390 aaPredicted RBP29.84■■■□□ 2.37
RBFOX1-210ENST00000547605 NSD2O96028 1365 aa29.83■■■□□ 2.37
RBFOX1-210ENST00000547605 MORC1Q86VD1 984 aa29.83■■■□□ 2.37
RBFOX1-210ENST00000547605 C1orf167Q5SNV9 1468 aa29.83■■■□□ 2.37
RBFOX1-210ENST00000547605 FYB1O15117 783 aa29.82■■■□□ 2.36
RBFOX1-210ENST00000547605 ORAI2Q96SN7 254 aa29.82■■■□□ 2.36
RBFOX1-210ENST00000547605 GGNBP2Q9H3C7 697 aa29.82■■■□□ 2.36
RBFOX1-210ENST00000547605 USP6P35125 1406 aa29.81■■■□□ 2.36
RBFOX1-210ENST00000547605 MST1RQ04912 1400 aa29.8■■■□□ 2.36
RBFOX1-210ENST00000547605 MRS2Q9HD23 443 aa29.8■■■□□ 2.36
RBFOX1-210ENST00000547605 KIF20BQ96Q89 1820 aa29.79■■■□□ 2.36
RBFOX1-210ENST00000547605 CCDC184Q52MB2 194 aa29.78■■■□□ 2.36
RBFOX1-210ENST00000547605 TTC21BQ7Z4L5 1316 aa29.77■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms