RNA–Protein interactions for RNA: ENST00000547222.1

RPH3A-208, Transcript of rabphilin 3A, human

TSL 4

Gene RPH3A, Length 569 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPH3A-208	ENST00000547222	L3MBTL2	Q969R5	705 aa		13.81	□□□□□ -0.2
RPH3A-208	ENST00000547222	STK26	Q9P289	416 aa		13.81	□□□□□ -0.2
RPH3A-208	ENST00000547222	MST1R	Q04912	1400 aa		13.81	□□□□□ -0.2
RPH3A-208	ENST00000547222	NEUROD1	Q13562	356 aa		13.8	□□□□□ -0.2
RPH3A-208	ENST00000547222	ADGRB2	O60241	1585 aa		13.79	□□□□□ -0.2
RPH3A-208	ENST00000547222	PHLPP1	O60346	1717 aa		13.79	□□□□□ -0.2
RPH3A-208	ENST00000547222	FMN2	Q9NZ56	1722 aa		13.79	□□□□□ -0.2
RPH3A-208	ENST00000547222	TONSL	Q96HA7	1378 aa		13.79	□□□□□ -0.2
RPH3A-208	ENST00000547222	AHDC1	Q5TGY3	1603 aa	Predicted RBP	13.79	□□□□□ -0.2
RPH3A-208	ENST00000547222	NHSL1	Q5SYE7	1610 aa		13.78	□□□□□ -0.2
RPH3A-208	ENST00000547222	HSPA1L	P34931	641 aa		13.77	□□□□□ -0.21
RPH3A-208	ENST00000547222	C1orf167	Q5SNV9	1468 aa		13.76	□□□□□ -0.21
RPH3A-208	ENST00000547222	PLEKHH1	Q9ULM0	1364 aa		13.76	□□□□□ -0.21
RPH3A-208	ENST00000547222	WAPL	Q7Z5K2	1190 aa		13.76	□□□□□ -0.21
RPH3A-208	ENST00000547222	ZEB1	P37275	1124 aa	Predicted RBP	13.75	□□□□□ -0.21
RPH3A-208	ENST00000547222	PRAM1	Q96QH2	718 aa		13.75	□□□□□ -0.21
RPH3A-208	ENST00000547222	COL16A1	Q07092	1604 aa	Predicted RBP	13.75	□□□□□ -0.21
RPH3A-208	ENST00000547222	BRINP3	Q76B58	766 aa		13.74	□□□□□ -0.21
RPH3A-208	ENST00000547222	POGK	Q9P215	609 aa		13.74	□□□□□ -0.21
RPH3A-208	ENST00000547222	TRAK1	Q9UPV9	953 aa		13.74	□□□□□ -0.21
RPH3A-208	ENST00000547222	KIF1A	Q12756	1690 aa		13.74	□□□□□ -0.21
RPH3A-208	ENST00000547222	RGPD8	O14715	1765 aa	Predicted RBP	13.73	□□□□□ -0.21
RPH3A-208	ENST00000547222	TIMELESS	Q9UNS1	1208 aa		13.72	□□□□□ -0.21
RPH3A-208	ENST00000547222	RALGAPB	Q86X10	1494 aa		13.72	□□□□□ -0.21
RPH3A-208	ENST00000547222	QRICH2	Q9H0J4	1663 aa		13.72	□□□□□ -0.21
RPH3A-208	ENST00000547222	EIF3A	Q14152	1382 aa	Known RBP	13.71	□□□□□ -0.21
RPH3A-208	ENST00000547222	ITSN1	Q15811	1721 aa		13.71	□□□□□ -0.21
RPH3A-208	ENST00000547222	NBPF1	Q3BBV0	1214 aa		13.71	□□□□□ -0.21
RPH3A-208	ENST00000547222	SHPRH	Q149N8	1683 aa		13.71	□□□□□ -0.21
RPH3A-208	ENST00000547222	ANKAR	Q7Z5J8	1434 aa		13.71	□□□□□ -0.22
RPH3A-208	ENST00000547222	ROCK2	O75116	1388 aa	Known RBP	13.71	□□□□□ -0.22
RPH3A-208	ENST00000547222	GPRASP1	Q5JY77	1395 aa		13.71	□□□□□ -0.22
RPH3A-208	ENST00000547222	USP32	Q8NFA0	1604 aa		13.69	□□□□□ -0.22
RPH3A-208	ENST00000547222	TULP4	Q9NRJ4	1543 aa		13.69	□□□□□ -0.22
RPH3A-208	ENST00000547222	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.68	□□□□□ -0.22
RPH3A-208	ENST00000547222	MED1	Q15648	1581 aa	Predicted RBP	13.67	□□□□□ -0.22
RPH3A-208	ENST00000547222	NBPF8	Q3BBV2	869 aa		13.67	□□□□□ -0.22
RPH3A-208	ENST00000547222	CCER1	Q8TC90	406 aa	Predicted RBP	13.67	□□□□□ -0.22
RPH3A-208	ENST00000547222	JCAD	Q9P266	1359 aa		13.67	□□□□□ -0.22
RPH3A-208	ENST00000547222	ORAI2	Q96SN7	254 aa		13.66	□□□□□ -0.22
RPH3A-208	ENST00000547222	NPHP3	Q7Z494	1330 aa		13.65	□□□□□ -0.22
RPH3A-208	ENST00000547222	MINK1	Q8N4C8	1332 aa	Predicted RBP	13.65	□□□□□ -0.22
RPH3A-208	ENST00000547222	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.65	□□□□□ -0.22
RPH3A-208	ENST00000547222	WASL	O00401	505 aa	Predicted RBP	13.65	□□□□□ -0.22
RPH3A-208	ENST00000547222	ESCO1	Q5FWF5	840 aa		13.65	□□□□□ -0.22
RPH3A-208	ENST00000547222	TOPAZ1	Q8N9V7	1692 aa		13.65	□□□□□ -0.22
RPH3A-208	ENST00000547222	SOS2	Q07890	1332 aa	Predicted RBP	13.64	□□□□□ -0.23
RPH3A-208	ENST00000547222	ATP7B	P35670	1465 aa		13.63	□□□□□ -0.23
RPH3A-208	ENST00000547222	PXDN	Q92626	1479 aa		13.63	□□□□□ -0.23
RPH3A-208	ENST00000547222	SBNO2	Q9Y2G9	1366 aa		13.63	□□□□□ -0.23
RPH3A-208	ENST00000547222	LRRC59	Q96AG4	307 aa	Known RBP	13.63	□□□□□ -0.23
RPH3A-208	ENST00000547222	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.63	□□□□□ -0.23
RPH3A-208	ENST00000547222	SPATA31A6	Q5VVP1	1343 aa		13.63	□□□□□ -0.23
RPH3A-208	ENST00000547222	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.62	□□□□□ -0.23
RPH3A-208	ENST00000547222	NUTM2F	A1L443	756 aa		13.62	□□□□□ -0.23
RPH3A-208	ENST00000547222	CARD11	Q9BXL7	1154 aa		13.62	□□□□□ -0.23
RPH3A-208	ENST00000547222	FOXO3	O43524	673 aa		13.6	□□□□□ -0.23
RPH3A-208	ENST00000547222	PHF8	Q9UPP1	1060 aa		13.6	□□□□□ -0.23
RPH3A-208	ENST00000547222	DDX17	Q92841	729 aa	Known RBP	13.59	□□□□□ -0.23
RPH3A-208	ENST00000547222	PRR36	Q9H6K5	1346 aa		13.59	□□□□□ -0.23
RPH3A-208	ENST00000547222	PNPLA6	Q8IY17	1366 aa		13.58	□□□□□ -0.23
RPH3A-208	ENST00000547222	CDK19	Q9BWU1	502 aa		13.58	□□□□□ -0.24
RPH3A-208	ENST00000547222	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.58	□□□□□ -0.24
RPH3A-208	ENST00000547222	EVC2	Q86UK5	1308 aa		13.58	□□□□□ -0.24
RPH3A-208	ENST00000547222	DISP3	Q9P2K9	1392 aa		13.58	□□□□□ -0.24
RPH3A-208	ENST00000547222	NUDT16	Q96DE0	195 aa	Known RBP	13.57	□□□□□ -0.24
RPH3A-208	ENST00000547222	CCDC61	Q9Y6R9	512 aa		13.57	□□□□□ -0.24
RPH3A-208	ENST00000547222	MARF1	Q9Y4F3	1742 aa	Known RBP	13.56	□□□□□ -0.24
RPH3A-208	ENST00000547222	SLC24A1	O60721	1099 aa		13.56	□□□□□ -0.24
RPH3A-208	ENST00000547222	PSME1	Q06323	249 aa		13.56	□□□□□ -0.24
RPH3A-208	ENST00000547222	ALS2	Q96Q42	1657 aa		13.56	□□□□□ -0.24
RPH3A-208	ENST00000547222	SBNO1	A3KN83	1393 aa		13.56	□□□□□ -0.24
RPH3A-208	ENST00000547222	TNS3	Q68CZ2	1445 aa		13.56	□□□□□ -0.24
RPH3A-208	ENST00000547222	LRP6	O75581	1613 aa		13.55	□□□□□ -0.24
RPH3A-208	ENST00000547222	SRPK2	P78362	688 aa	Known RBP	13.55	□□□□□ -0.24
RPH3A-208	ENST00000547222	POLR3A	O14802	1390 aa	Predicted RBP	13.55	□□□□□ -0.24
RPH3A-208	ENST00000547222	KRT28	Q7Z3Y7	464 aa		13.54	□□□□□ -0.24
RPH3A-208	ENST00000547222	PMFBP1	Q8TBY8	1022 aa		13.54	□□□□□ -0.24
RPH3A-208	ENST00000547222	SPATA31A3	Q5VYP0	1347 aa		13.54	□□□□□ -0.24
RPH3A-208	ENST00000547222	ABCA3	Q99758	1704 aa		13.53	□□□□□ -0.24
RPH3A-208	ENST00000547222	PLEKHG3	A1L390	1219 aa		13.53	□□□□□ -0.24
RPH3A-208	ENST00000547222	ARHGEF10	O15013	1369 aa		13.53	□□□□□ -0.24
RPH3A-208	ENST00000547222	ATAD2	Q6PL18	1390 aa		13.53	□□□□□ -0.24
RPH3A-208	ENST00000547222	USP47	Q96K76	1375 aa		13.53	□□□□□ -0.24
RPH3A-208	ENST00000547222	PPIP5K1	Q6PFW1	1433 aa		13.53	□□□□□ -0.24
RPH3A-208	ENST00000547222	AKAP12	Q02952	1782 aa		13.53	□□□□□ -0.24
RPH3A-208	ENST00000547222	XPC	Q01831	940 aa	Predicted RBP	13.52	□□□□□ -0.25
RPH3A-208	ENST00000547222	NGDN	Q8NEJ9	315 aa	Known RBP	13.52	□□□□□ -0.25
RPH3A-208	ENST00000547222	BRD4	O60885	1362 aa	Predicted RBP	13.51	□□□□□ -0.25
RPH3A-208	ENST00000547222	PUS7	Q96PZ0	661 aa	Known RBP	13.51	□□□□□ -0.25
RPH3A-208	ENST00000547222	CABP2	Q9NPB3	220 aa		13.51	□□□□□ -0.25
RPH3A-208	ENST00000547222	CRYBG1	Q9Y4K1	1723 aa		13.5	□□□□□ -0.25
RPH3A-208	ENST00000547222	ACE	P12821	1306 aa		13.5	□□□□□ -0.25
RPH3A-208	ENST00000547222	ST20-MTHFS	A0A0A6YYL1	179 aa		13.49	□□□□□ -0.25
RPH3A-208	ENST00000547222	MEX3C	Q5U5Q3	659 aa	Known RBP	13.49	□□□□□ -0.25
RPH3A-208	ENST00000547222	TESK2	Q96S53	571 aa		13.49	□□□□□ -0.25
RPH3A-208	ENST00000547222	MON2	Q7Z3U7	1717 aa		13.49	□□□□□ -0.25
RPH3A-208	ENST00000547222	NINL	Q9Y2I6	1382 aa		13.47	□□□□□ -0.25
RPH3A-208	ENST00000547222	NRK	Q7Z2Y5	1582 aa		13.47	□□□□□ -0.25
RPH3A-208	ENST00000547222	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.47	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms