RNA–Protein interactions for RNA: ENST00000547188.1

PRDM4-202, Transcript of PR/SET domain 4, humanhuman

TSL 3

Gene PRDM4, Length 640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-202ENST00000547188 SF3B2Q13435 895 aaKnown RBP36.62■■■■□ 3.45
PRDM4-202ENST00000547188 LOC105371045A0A1W2PR82 267 aa36.61■■■■□ 3.45
PRDM4-202ENST00000547188 TNKS1BP1Q9C0C2 1729 aaKnown RBP36.61■■■■□ 3.45
PRDM4-202ENST00000547188 RALGAPBQ86X10 1494 aa36.61■■■■□ 3.45
PRDM4-202ENST00000547188 XPCQ01831 940 aaPredicted RBP36.56■■■■□ 3.44
PRDM4-202ENST00000547188 HRCP23327 699 aa36.54■■■■□ 3.44
PRDM4-202ENST00000547188 ROBO2Q9HCK4 1378 aa36.53■■■■□ 3.44
PRDM4-202ENST00000547188 UNC5CLQ8IV45 518 aa36.53■■■■□ 3.44
PRDM4-202ENST00000547188 SPHKAPQ2M3C7 1700 aa36.53■■■■□ 3.44
PRDM4-202ENST00000547188 PXDNQ92626 1479 aa36.51■■■■□ 3.44
PRDM4-202ENST00000547188 NUP155O75694 1391 aa36.51■■■■□ 3.43
PRDM4-202ENST00000547188 NEXMIFQ5QGS0 1516 aa36.49■■■■□ 3.43
PRDM4-202ENST00000547188 SEPT12Q8IYM1 358 aa36.49■■■■□ 3.43
PRDM4-202ENST00000547188 NPHP3Q7Z494 1330 aa36.49■■■■□ 3.43
PRDM4-202ENST00000547188 ESCO1Q5FWF5 840 aa36.48■■■■□ 3.43
PRDM4-202ENST00000547188 SLIT2O94813 1529 aa36.47■■■■□ 3.43
PRDM4-202ENST00000547188 FOXO3O43524 673 aa36.45■■■■□ 3.43
PRDM4-202ENST00000547188 KRT27Q7Z3Y8 459 aa36.37■■■■□ 3.41
PRDM4-202ENST00000547188 BAG6P46379 1132 aa36.36■■■■□ 3.41
PRDM4-202ENST00000547188 CLTCL1P53675 1640 aa36.36■■■■□ 3.41
PRDM4-202ENST00000547188 USP32Q8NFA0 1604 aa36.33■■■■□ 3.41
PRDM4-202ENST00000547188 NUTM2FA1L443 756 aa36.32■■■■□ 3.4
PRDM4-202ENST00000547188 CCDC9Q9Y3X0 531 aaKnown RBP36.32■■■■□ 3.4
PRDM4-202ENST00000547188 HFM1A2PYH4 1435 aa36.32■■■■□ 3.4
PRDM4-202ENST00000547188 KIF1BO60333 1816 aa36.31■■■■□ 3.4
PRDM4-202ENST00000547188 CDC42BPGQ6DT37 1551 aa36.31■■■■□ 3.4
PRDM4-202ENST00000547188 R3HDM1Q15032 1099 aaKnown RBP36.3■■■■□ 3.4
PRDM4-202ENST00000547188 VPS72Q15906 364 aa36.29■■■■□ 3.4
PRDM4-202ENST00000547188 PLCH1Q4KWH8 1693 aa36.28■■■■□ 3.4
PRDM4-202ENST00000547188 ONECUT3O60422 494 aaPredicted RBP36.27■■■■□ 3.4
PRDM4-202ENST00000547188 YY1P25490 414 aa36.27■■■■□ 3.4
PRDM4-202ENST00000547188 EN1Q05925 392 aaPredicted RBP36.27■■■■□ 3.4
PRDM4-202ENST00000547188 LRPPRCP42704 1394 aaKnown RBP36.27■■■■□ 3.4
PRDM4-202ENST00000547188 ROCK1Q13464 1354 aa36.27■■■■□ 3.4
PRDM4-202ENST00000547188 PRAG1Q86YV5 1406 aa36.26■■■■□ 3.4
PRDM4-202ENST00000547188 PLEKHG5O94827 1062 aa36.26■■■■□ 3.4
PRDM4-202ENST00000547188 SPATA31A3Q5VYP0 1347 aa36.25■■■■□ 3.39
PRDM4-202ENST00000547188 A0A0G2JS52 829 aa36.24■■■■□ 3.39
PRDM4-202ENST00000547188 MYT1Q01538 1121 aa36.24■■■■□ 3.39
PRDM4-202ENST00000547188 HAP1P54257 671 aaPredicted RBP36.21■■■■□ 3.39
PRDM4-202ENST00000547188 NWD2Q9ULI1 1742 aa36.21■■■■□ 3.39
PRDM4-202ENST00000547188 CABLES1Q8TDN4 633 aa36.2■■■■□ 3.39
PRDM4-202ENST00000547188 VGFO15240 615 aaPredicted RBP36.19■■■■□ 3.38
PRDM4-202ENST00000547188 NAIPQ13075 1403 aa36.18■■■■□ 3.38
PRDM4-202ENST00000547188 RGPD1P0DJD0 1748 aa36.18■■■■□ 3.38
PRDM4-202ENST00000547188 FAM182BQ5T319 152 aa36.15■■■■□ 3.38
PRDM4-202ENST00000547188 ITGAEP38570 1179 aa36.13■■■■□ 3.37
PRDM4-202ENST00000547188 KRT28Q7Z3Y7 464 aa36.13■■■■□ 3.37
PRDM4-202ENST00000547188 FAM98CQ17RN3 349 aaKnown RBP36.12■■■■□ 3.37
PRDM4-202ENST00000547188 WAPLQ7Z5K2 1190 aa36.1■■■■□ 3.37
PRDM4-202ENST00000547188 CCDC144AA2RUR9 1427 aa36.09■■■■□ 3.37
PRDM4-202ENST00000547188 ABCA3Q99758 1704 aa36.09■■■■□ 3.37
PRDM4-202ENST00000547188 KIF1AQ12756 1690 aa36.09■■■■□ 3.37
PRDM4-202ENST00000547188 EZH2Q15910 746 aaKnown RBP36.07■■■■□ 3.36
PRDM4-202ENST00000547188 TNS1Q9HBL0 1735 aaKnown RBP36.07■■■■□ 3.36
PRDM4-202ENST00000547188 PPLO60437 1756 aa36.07■■■■□ 3.36
PRDM4-202ENST00000547188 FMN2Q9NZ56 1722 aa36.06■■■■□ 3.36
PRDM4-202ENST00000547188 RGPD8O14715 1765 aaPredicted RBP36.05■■■■□ 3.36
PRDM4-202ENST00000547188 STK26Q9P289 416 aa36.05■■■■□ 3.36
PRDM4-202ENST00000547188 TNS3Q68CZ2 1445 aa36.05■■■■□ 3.36
PRDM4-202ENST00000547188 FAM83GA6ND36 823 aa36.04■■■■□ 3.36
PRDM4-202ENST00000547188 NRAPQ86VF7 1730 aa36.03■■■■□ 3.36
PRDM4-202ENST00000547188 LMOD2Q6P5Q4 547 aa36.02■■■■□ 3.36
PRDM4-202ENST00000547188 PLEKHH1Q9ULM0 1364 aa36.01■■■■□ 3.35
PRDM4-202ENST00000547188 DISP2A7MBM2 1401 aa35.99■■■■□ 3.35
PRDM4-202ENST00000547188 RPGRIP1LQ68CZ1 1315 aa35.97■■■■□ 3.35
PRDM4-202ENST00000547188 PSME1Q06323 249 aa35.94■■■■□ 3.34
PRDM4-202ENST00000547188 BTG4Q9NY30 223 aa35.94■■■■□ 3.34
PRDM4-202ENST00000547188 CAMKK2Q96RR4 588 aa35.93■■■■□ 3.34
PRDM4-202ENST00000547188 PHF8Q9UPP1 1060 aa35.92■■■■□ 3.34
PRDM4-202ENST00000547188 TECPR2O15040 1411 aa35.91■■■■□ 3.34
PRDM4-202ENST00000547188 IFT172Q9UG01 1749 aa35.89■■■■□ 3.34
PRDM4-202ENST00000547188 TRIM37O94972 964 aa35.87■■■■□ 3.33
PRDM4-202ENST00000547188 SBNO1A3KN83 1393 aa35.87■■■■□ 3.33
PRDM4-202ENST00000547188 ADGRF5Q8IZF2 1346 aa35.86■■■■□ 3.33
PRDM4-202ENST00000547188 KNDC1Q76NI1 1749 aa35.86■■■■□ 3.33
PRDM4-202ENST00000547188 TMEM132EQ6IEE7 984 aa35.86■■■■□ 3.33
PRDM4-202ENST00000547188 THSD7AQ9UPZ6 1657 aa35.86■■■■□ 3.33
PRDM4-202ENST00000547188 ARHGEF10O15013 1369 aa35.86■■■■□ 3.33
PRDM4-202ENST00000547188 ADGRB2O60241 1585 aa35.85■■■■□ 3.33
PRDM4-202ENST00000547188 COL14A1Q05707 1796 aaKnown RBP35.83■■■■□ 3.33
PRDM4-202ENST00000547188 SPATA31A5Q5VU36 1347 aa35.83■■■■□ 3.33
PRDM4-202ENST00000547188 SPATA31A7Q8IWB4 1347 aa35.83■■■■□ 3.33
PRDM4-202ENST00000547188 ABCC11Q96J66 1382 aa35.82■■■■□ 3.32
PRDM4-202ENST00000547188 PPP1R1BQ9UD71 204 aaPredicted RBP35.82■■■■□ 3.32
PRDM4-202ENST00000547188 APBA3O96018 575 aa35.81■■■■□ 3.32
PRDM4-202ENST00000547188 NRXN1Q9ULB1 1477 aa35.8■■■■□ 3.32
PRDM4-202ENST00000547188 NUP188Q5SRE5 1749 aa35.8■■■■□ 3.32
PRDM4-202ENST00000547188 RREB1Q92766 1687 aa35.8■■■■□ 3.32
PRDM4-202ENST00000547188 CAMTA1Q9Y6Y1 1673 aa35.8■■■■□ 3.32
PRDM4-202ENST00000547188 DCAF8L1A6NGE4 600 aa35.79■■■■□ 3.32
PRDM4-202ENST00000547188 RRBP1Q9P2E9 1410 aaKnown RBP35.74■■■■□ 3.31
PRDM4-202ENST00000547188 FAM196AQ6ZSG2 479 aa35.74■■■■□ 3.31
PRDM4-202ENST00000547188 PMFBP1Q8TBY8 1022 aa35.74■■■■□ 3.31
PRDM4-202ENST00000547188 PARD3Q8TEW0 1356 aa35.73■■■■□ 3.31
PRDM4-202ENST00000547188 SPON1Q9HCB6 807 aa35.72■■■■□ 3.31
PRDM4-202ENST00000547188 NBPF8Q3BBV2 869 aa35.7■■■■□ 3.31
PRDM4-202ENST00000547188 NBPF14Q5TI25 921 aa35.7■■■■□ 3.31
PRDM4-202ENST00000547188 YTHDC2Q9H6S0 1430 aaKnown RBP35.7■■■■□ 3.31
PRDM4-202ENST00000547188 TRPM3Q9HCF6 1732 aaPredicted RBP35.7■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms