RNA–Protein interactions for RNA: ENST00000547065.1

VDR-204, Transcript of vitamin D receptor, humanhuman

TSL 2

Gene VDR, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-204ENST00000547065 CABP2Q9NPB3 220 aa24.76■■□□□ 1.55
VDR-204ENST00000547065 CGNL1Q0VF96 1302 aa24.76■■□□□ 1.55
VDR-204ENST00000547065 ANKRD36BQ8N2N9 1353 aa24.76■■□□□ 1.55
VDR-204ENST00000547065 SAFB2Q14151 953 aaKnown RBP eCLIP24.75■■□□□ 1.55
VDR-204ENST00000547065 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.75■■□□□ 1.55
VDR-204ENST00000547065 PRAM1Q96QH2 718 aa24.75■■□□□ 1.55
VDR-204ENST00000547065 SENP3Q9H4L4 574 aaPredicted RBP24.75■■□□□ 1.55
VDR-204ENST00000547065 RCAN3Q9UKA8 241 aa24.75■■□□□ 1.55
VDR-204ENST00000547065 CDCA7LQ96GN5 454 aa24.73■■□□□ 1.55
VDR-204ENST00000547065 POLR3AO14802 1390 aaPredicted RBP24.73■■□□□ 1.55
VDR-204ENST00000547065 USP32Q8NFA0 1604 aa24.73■■□□□ 1.55
VDR-204ENST00000547065 HDGFP51858 240 aaKnown RBP24.72■■□□□ 1.55
VDR-204ENST00000547065 SRPK2P78362 688 aaKnown RBP24.72■■□□□ 1.55
VDR-204ENST00000547065 NSD2O96028 1365 aa24.71■■□□□ 1.55
VDR-204ENST00000547065 ATAD2Q6PL18 1390 aa24.7■■□□□ 1.55
VDR-204ENST00000547065 MINK1Q8N4C8 1332 aaPredicted RBP24.69■■□□□ 1.54
VDR-204ENST00000547065 RRP1P56182 461 aaKnown RBP24.68■■□□□ 1.54
VDR-204ENST00000547065 TNRQ92752 1358 aa24.68■■□□□ 1.54
VDR-204ENST00000547065 NGEFQ8N5V2 710 aa24.67■■□□□ 1.54
VDR-204ENST00000547065 DLC1Q96QB1 1528 aa24.66■■□□□ 1.54
VDR-204ENST00000547065 B4GALNT3Q6L9W6 998 aa24.66■■□□□ 1.54
VDR-204ENST00000547065 ZNF521Q96K83 1311 aa24.66■■□□□ 1.54
VDR-204ENST00000547065 TERF2IPQ9NYB0 399 aa24.65■■□□□ 1.54
VDR-204ENST00000547065 ABCC11Q96J66 1382 aa24.65■■□□□ 1.54
VDR-204ENST00000547065 PLEKHH1Q9ULM0 1364 aa24.65■■□□□ 1.54
VDR-204ENST00000547065 CDK19Q9BWU1 502 aa24.64■■□□□ 1.53
VDR-204ENST00000547065 GOLGA2Q08379 1002 aa24.62■■□□□ 1.53
VDR-204ENST00000547065 TNNT2P45379 298 aaPredicted RBP24.62■■□□□ 1.53
VDR-204ENST00000547065 CCDC146Q8IYE0 955 aa24.62■■□□□ 1.53
VDR-204ENST00000547065 A0A1W2PP64 1363 aa24.61■■□□□ 1.53
VDR-204ENST00000547065 CFAP53Q96M91 514 aa24.61■■□□□ 1.53
VDR-204ENST00000547065 APAF1O14727 1248 aa24.59■■□□□ 1.53
VDR-204ENST00000547065 MTHFSP49914 203 aa24.59■■□□□ 1.53
VDR-204ENST00000547065 SIRT1Q96EB6 747 aa24.59■■□□□ 1.53
VDR-204ENST00000547065 HDGFL2Q7Z4V5 671 aaPredicted RBP24.58■■□□□ 1.53
VDR-204ENST00000547065 SETD1AO15047 1707 aaKnown RBP24.58■■□□□ 1.52
VDR-204ENST00000547065 DUSP27Q5VZP5 1158 aa24.57■■□□□ 1.52
VDR-204ENST00000547065 WAPLQ7Z5K2 1190 aa24.57■■□□□ 1.52
VDR-204ENST00000547065 CCDC136Q96JN2 1154 aa24.57■■□□□ 1.52
VDR-204ENST00000547065 SLFN5Q08AF3 891 aa24.56■■□□□ 1.52
VDR-204ENST00000547065 TMEM2Q9UHN6 1383 aa24.56■■□□□ 1.52
VDR-204ENST00000547065 TRMT2AQ8IZ69 625 aaKnown RBP24.54■■□□□ 1.52
VDR-204ENST00000547065 NRXN3Q9Y4C0 1643 aa24.54■■□□□ 1.52
VDR-204ENST00000547065 CD163L1Q9NR16 1453 aa24.54■■□□□ 1.52
VDR-204ENST00000547065 METP08581 1390 aa24.54■■□□□ 1.52
VDR-204ENST00000547065 CABP1Q9NZU7 370 aa24.54■■□□□ 1.52
VDR-204ENST00000547065 MED14O60244 1454 aa24.53■■□□□ 1.52
VDR-204ENST00000547065 RUNDC1Q96C34 613 aa24.52■■□□□ 1.52
VDR-204ENST00000547065 FYB1O15117 783 aa24.52■■□□□ 1.52
VDR-204ENST00000547065 NLRP1Q9C000 1473 aa24.51■■□□□ 1.51
VDR-204ENST00000547065 FAM135BQ49AJ0 1406 aa24.51■■□□□ 1.51
VDR-204ENST00000547065 E9PSI1 815 aa24.49■■□□□ 1.51
VDR-204ENST00000547065 EXOC6Q8TAG9 804 aa24.49■■□□□ 1.51
VDR-204ENST00000547065 GGNBP2Q9H3C7 697 aa24.49■■□□□ 1.51
VDR-204ENST00000547065 RBM19Q9Y4C8 960 aaKnown RBP24.49■■□□□ 1.51
VDR-204ENST00000547065 SHPRHQ149N8 1683 aa24.49■■□□□ 1.51
VDR-204ENST00000547065 WASLO00401 505 aaPredicted RBP24.49■■□□□ 1.51
VDR-204ENST00000547065 TECPR2O15040 1411 aa24.49■■□□□ 1.51
VDR-204ENST00000547065 UBR1Q8IWV7 1749 aa24.49■■□□□ 1.51
VDR-204ENST00000547065 TXNDC2Q86VQ3 553 aa24.48■■□□□ 1.51
VDR-204ENST00000547065 NCBP3Q53F19 620 aaKnown RBP24.47■■□□□ 1.51
VDR-204ENST00000547065 ATP7BP35670 1465 aa24.46■■□□□ 1.51
VDR-204ENST00000547065 CEBPAP49715 358 aaPredicted RBP24.44■■□□□ 1.5
VDR-204ENST00000547065 WWC1Q8IX03 1113 aa24.44■■□□□ 1.5
VDR-204ENST00000547065 PLEKHG1Q9ULL1 1385 aa24.44■■□□□ 1.5
VDR-204ENST00000547065 PLIN1O60240 522 aa24.43■■□□□ 1.5
VDR-204ENST00000547065 KNDC1Q76NI1 1749 aa24.43■■□□□ 1.5
VDR-204ENST00000547065 TRHP20396 242 aaPredicted RBP24.42■■□□□ 1.5
VDR-204ENST00000547065 TCP11L2Q8N4U5 519 aa24.42■■□□□ 1.5
VDR-204ENST00000547065 SPINK5Q9NQ38 1064 aaPredicted RBP24.42■■□□□ 1.5
VDR-204ENST00000547065 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.42■■□□□ 1.5
VDR-204ENST00000547065 EID1Q9Y6B2 187 aa24.42■■□□□ 1.5
VDR-204ENST00000547065 ADAMTS13Q76LX8 1427 aa24.41■■□□□ 1.5
VDR-204ENST00000547065 U2AF1L5P0DN76 240 aaPredicted RBP24.41■■□□□ 1.5
VDR-204ENST00000547065 LTKP29376 864 aa24.41■■□□□ 1.5
VDR-204ENST00000547065 U2AF1Q01081 240 aaKnown RBP eCLIP24.41■■□□□ 1.5
VDR-204ENST00000547065 NKTRP30414 1462 aaKnown RBP24.41■■□□□ 1.5
VDR-204ENST00000547065 ANKRD26Q9UPS8 1709 aa24.4■■□□□ 1.5
VDR-204ENST00000547065 CCDC27Q2M243 656 aa24.4■■□□□ 1.5
VDR-204ENST00000547065 PHF23Q9BUL5 403 aaPredicted RBP24.4■■□□□ 1.5
VDR-204ENST00000547065 CPS1P31327 1500 aa24.4■■□□□ 1.5
VDR-204ENST00000547065 NUDT16Q96DE0 195 aaKnown RBP24.39■■□□□ 1.5
VDR-204ENST00000547065 WDR63Q8IWG1 891 aa24.39■■□□□ 1.49
VDR-204ENST00000547065 IQSEC2Q5JU85 1478 aa24.38■■□□□ 1.49
VDR-204ENST00000547065 CPSF1Q10570 1443 aaKnown RBP24.38■■□□□ 1.49
VDR-204ENST00000547065 CCDC61Q9Y6R9 512 aa24.37■■□□□ 1.49
VDR-204ENST00000547065 PPIP5K1Q6PFW1 1433 aa24.37■■□□□ 1.49
VDR-204ENST00000547065 CRBNQ96SW2 442 aa24.37■■□□□ 1.49
VDR-204ENST00000547065 DMRT2Q9Y5R5 561 aa24.37■■□□□ 1.49
VDR-204ENST00000547065 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.35■■□□□ 1.49
VDR-204ENST00000547065 COL3A1P02461 1466 aaPredicted RBP24.35■■□□□ 1.49
VDR-204ENST00000547065 EDC4Q6P2E9 1401 aaKnown RBP24.35■■□□□ 1.49
VDR-204ENST00000547065 PNPLA6Q8IY17 1366 aa24.34■■□□□ 1.49
VDR-204ENST00000547065 NEUROD2Q15784 382 aa24.34■■□□□ 1.49
VDR-204ENST00000547065 THEMISQ8N1K5 641 aaPredicted RBP24.34■■□□□ 1.49
VDR-204ENST00000547065 C3P01024 1663 aa24.34■■□□□ 1.49
VDR-204ENST00000547065 ROBO2Q9HCK4 1378 aa24.34■■□□□ 1.49
VDR-204ENST00000547065 RRP7AQ9Y3A4 280 aaKnown RBP24.34■■□□□ 1.49
VDR-204ENST00000547065 SLIT1O75093 1534 aa24.33■■□□□ 1.49
VDR-204ENST00000547065 ARHGAP23Q9P227 1491 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms