RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 DUSP27Q5VZP5 1158 aa16.64■□□□□ 0.25
SCAF11-209ENST00000547018 LAS1LQ9Y4W2 734 aaKnown RBP16.64■□□□□ 0.25
SCAF11-209ENST00000547018 RIMBP3CA6NJZ7 1639 aa16.64■□□□□ 0.25
SCAF11-209ENST00000547018 RIMBP3BA6NNM3 1639 aa16.64■□□□□ 0.25
SCAF11-209ENST00000547018 RIMBP3Q9UFD9 1639 aa16.64■□□□□ 0.25
SCAF11-209ENST00000547018 PIK3C2GO75747 1445 aa16.63■□□□□ 0.25
SCAF11-209ENST00000547018 RGS3P49796 1198 aa16.63■□□□□ 0.25
SCAF11-209ENST00000547018 DIP2CQ9Y2E4 1556 aa16.62■□□□□ 0.25
SCAF11-209ENST00000547018 ZRANB1Q9UGI0 708 aa16.62■□□□□ 0.25
SCAF11-209ENST00000547018 RBM33Q96EV2 1170 aaKnown RBP16.61■□□□□ 0.25
SCAF11-209ENST00000547018 TERF2IPQ9NYB0 399 aa16.61■□□□□ 0.25
SCAF11-209ENST00000547018 MSH5O43196 834 aa16.6■□□□□ 0.25
SCAF11-209ENST00000547018 IQGAP1P46940 1657 aa16.6■□□□□ 0.25
SCAF11-209ENST00000547018 HDGFL2Q7Z4V5 671 aaPredicted RBP16.6■□□□□ 0.25
SCAF11-209ENST00000547018 HMOX1P09601 288 aa16.6■□□□□ 0.25
SCAF11-209ENST00000547018 MYOM2P54296 1465 aa16.59■□□□□ 0.25
SCAF11-209ENST00000547018 SLFN5Q08AF3 891 aa16.59■□□□□ 0.25
SCAF11-209ENST00000547018 PANK1Q8TE04 598 aa16.59■□□□□ 0.25
SCAF11-209ENST00000547018 TSR2Q969E8 191 aaKnown RBP16.59■□□□□ 0.25
SCAF11-209ENST00000547018 WWC1Q8IX03 1113 aa16.58■□□□□ 0.24
SCAF11-209ENST00000547018 ADGRB3O60242 1522 aa16.58■□□□□ 0.24
SCAF11-209ENST00000547018 COG6Q9Y2V7 657 aa16.58■□□□□ 0.24
SCAF11-209ENST00000547018 CFAP74Q9C0B2 1584 aa16.57■□□□□ 0.24
SCAF11-209ENST00000547018 FYB1O15117 783 aa16.57■□□□□ 0.24
SCAF11-209ENST00000547018 SIGLEC1Q9BZZ2 1709 aa16.57■□□□□ 0.24
SCAF11-209ENST00000547018 KDM5AP29375 1690 aaKnown RBP16.57■□□□□ 0.24
SCAF11-209ENST00000547018 A0A1W2PP64 1363 aa16.57■□□□□ 0.24
SCAF11-209ENST00000547018 RNF123Q5XPI4 1314 aa16.57■□□□□ 0.24
SCAF11-209ENST00000547018 TNNQ9UQP3 1299 aa16.57■□□□□ 0.24
SCAF11-209ENST00000547018 TCERG1O14776 1098 aaKnown RBP16.56■□□□□ 0.24
SCAF11-209ENST00000547018 SYNMO15061 1565 aa16.55■□□□□ 0.24
SCAF11-209ENST00000547018 MAPK8IP3Q9UPT6 1336 aa16.55■□□□□ 0.24
SCAF11-209ENST00000547018 LAMC1P11047 1609 aa16.55■□□□□ 0.24
SCAF11-209ENST00000547018 CAMSAP1Q5T5Y3 1602 aa16.55■□□□□ 0.24
SCAF11-209ENST00000547018 ELL2O00472 640 aaPredicted RBP16.55■□□□□ 0.24
SCAF11-209ENST00000547018 RRS1Q15050 365 aaKnown RBP16.55■□□□□ 0.24
SCAF11-209ENST00000547018 NME9Q86XW9 330 aa16.55■□□□□ 0.24
SCAF11-209ENST00000547018 RUNDC1Q96C34 613 aa16.55■□□□□ 0.24
SCAF11-209ENST00000547018 BLMP54132 1417 aaPredicted RBP16.54■□□□□ 0.24
SCAF11-209ENST00000547018 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.54■□□□□ 0.24
SCAF11-209ENST00000547018 ZMYM3Q14202 1370 aa16.54■□□□□ 0.24
SCAF11-209ENST00000547018 YTHDC2Q9H6S0 1430 aaKnown RBP16.53■□□□□ 0.24
SCAF11-209ENST00000547018 LMTK2Q8IWU2 1503 aa16.53■□□□□ 0.24
SCAF11-209ENST00000547018 THUMPD2Q9BTF0 503 aaKnown RBP16.53■□□□□ 0.24
SCAF11-209ENST00000547018 E9PSI1 815 aa16.53■□□□□ 0.24
SCAF11-209ENST00000547018 PMFBP1Q8TBY8 1022 aa16.53■□□□□ 0.24
SCAF11-209ENST00000547018 NBR1Q14596 966 aa16.52■□□□□ 0.24
SCAF11-209ENST00000547018 EMILIN1Q9Y6C2 1016 aa16.52■□□□□ 0.24
SCAF11-209ENST00000547018 C14orf37Q86TY3 774 aa16.52■□□□□ 0.23
SCAF11-209ENST00000547018 NUTM2GQ5VZR2 741 aa16.51■□□□□ 0.23
SCAF11-209ENST00000547018 MYO5BQ9ULV0 1848 aa16.51■□□□□ 0.23
SCAF11-209ENST00000547018 RIMS2Q9UQ26 1411 aa16.5■□□□□ 0.23
SCAF11-209ENST00000547018 ZBTB7CA1YPR0 619 aa16.5■□□□□ 0.23
SCAF11-209ENST00000547018 RICTORQ6R327 1708 aa16.5■□□□□ 0.23
SCAF11-209ENST00000547018 ANP32EQ9BTT0 268 aa16.5■□□□□ 0.23
SCAF11-209ENST00000547018 ANP32AP39687 249 aaKnown RBP16.49■□□□□ 0.23
SCAF11-209ENST00000547018 METP08581 1390 aa16.49■□□□□ 0.23
SCAF11-209ENST00000547018 DIAPH1O60610 1272 aaKnown RBP16.49■□□□□ 0.23
SCAF11-209ENST00000547018 RIPK4P57078 832 aa16.49■□□□□ 0.23
SCAF11-209ENST00000547018 NUDT16Q96DE0 195 aaKnown RBP16.49■□□□□ 0.23
SCAF11-209ENST00000547018 ANKRD36BQ8N2N9 1353 aa16.49■□□□□ 0.23
SCAF11-209ENST00000547018 ADGRB1O14514 1584 aa16.49■□□□□ 0.23
SCAF11-209ENST00000547018 GLI2P10070 1586 aa16.49■□□□□ 0.23
SCAF11-209ENST00000547018 LTKP29376 864 aa16.48■□□□□ 0.23
SCAF11-209ENST00000547018 NEFMP07197 916 aa16.48■□□□□ 0.23
SCAF11-209ENST00000547018 NEXMIFQ5QGS0 1516 aa16.48■□□□□ 0.23
SCAF11-209ENST00000547018 QRICH2Q9H0J4 1663 aa16.47■□□□□ 0.23
SCAF11-209ENST00000547018 MYOM1P52179 1685 aa16.47■□□□□ 0.23
SCAF11-209ENST00000547018 PIK3C2BO00750 1634 aa16.47■□□□□ 0.23
SCAF11-209ENST00000547018 DIP2BQ9P265 1576 aa16.47■□□□□ 0.23
SCAF11-209ENST00000547018 NRXN1Q9ULB1 1477 aa16.47■□□□□ 0.23
SCAF11-209ENST00000547018 PPLO60437 1756 aa16.47■□□□□ 0.23
SCAF11-209ENST00000547018 ZMYM4Q5VZL5 1548 aa16.46■□□□□ 0.23
SCAF11-209ENST00000547018 ZNF521Q96K83 1311 aa16.46■□□□□ 0.23
SCAF11-209ENST00000547018 PAK3O75914 559 aaPredicted RBP16.46■□□□□ 0.23
SCAF11-209ENST00000547018 PRKAR2BP31323 418 aa16.46■□□□□ 0.23
SCAF11-209ENST00000547018 SBNO2Q9Y2G9 1366 aa16.46■□□□□ 0.23
SCAF11-209ENST00000547018 PDE4AP27815 886 aa16.46■□□□□ 0.22
SCAF11-209ENST00000547018 TULP4Q9NRJ4 1543 aa16.45■□□□□ 0.22
SCAF11-209ENST00000547018 WASLO00401 505 aaPredicted RBP16.45■□□□□ 0.22
SCAF11-209ENST00000547018 EXOSC9Q06265 439 aaKnown RBP16.45■□□□□ 0.22
SCAF11-209ENST00000547018 NPC1L1Q9UHC9 1359 aa16.44■□□□□ 0.22
SCAF11-209ENST00000547018 HDGFP51858 240 aaKnown RBP16.44■□□□□ 0.22
SCAF11-209ENST00000547018 SMC4Q9NTJ3 1288 aa16.43■□□□□ 0.22
SCAF11-209ENST00000547018 POLR3AO14802 1390 aaPredicted RBP16.43■□□□□ 0.22
SCAF11-209ENST00000547018 ARHGAP31Q2M1Z3 1444 aa16.43■□□□□ 0.22
SCAF11-209ENST00000547018 ATAD2Q6PL18 1390 aa16.43■□□□□ 0.22
SCAF11-209ENST00000547018 EID1Q9Y6B2 187 aa16.43■□□□□ 0.22
SCAF11-209ENST00000547018 TMPOP42166 694 aaKnown RBP16.43■□□□□ 0.22
SCAF11-209ENST00000547018 DCTN1Q14203 1278 aa16.43■□□□□ 0.22
SCAF11-209ENST00000547018 FTSJ3Q8IY81 847 aaKnown RBP16.43■□□□□ 0.22
SCAF11-209ENST00000547018 CLTCQ00610 1675 aaKnown RBP16.42■□□□□ 0.22
SCAF11-209ENST00000547018 SLC4A3P48751 1232 aa16.42■□□□□ 0.22
SCAF11-209ENST00000547018 TNRQ92752 1358 aa16.42■□□□□ 0.22
SCAF11-209ENST00000547018 COG3Q96JB2 828 aa16.42■□□□□ 0.22
SCAF11-209ENST00000547018 RLBP1P12271 317 aa16.41■□□□□ 0.22
SCAF11-209ENST00000547018 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.41■□□□□ 0.22
SCAF11-209ENST00000547018 POLKQ9UBT6 870 aa16.41■□□□□ 0.22
SCAF11-209ENST00000547018 PHACTR3Q96KR7 559 aa16.41■□□□□ 0.22
SCAF11-209ENST00000547018 NGDNQ8NEJ9 315 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms