RNA–Protein interactions for RNA: ENST00000546961.1

SCN8A-204, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-204ENST00000546961 PRAG1Q86YV5 1406 aa29.91■■■□□ 2.38
SCN8A-204ENST00000546961 TMEM132EQ6IEE7 984 aa29.91■■■□□ 2.38
SCN8A-204ENST00000546961 PPLO60437 1756 aa29.9■■■□□ 2.38
SCN8A-204ENST00000546961 NUTM2FA1L443 756 aa29.89■■■□□ 2.38
SCN8A-204ENST00000546961 CDK12Q9NYV4 1490 aaPredicted RBP29.88■■■□□ 2.37
SCN8A-204ENST00000546961 ANKRD30BQ9BXX2 1392 aa29.88■■■□□ 2.37
SCN8A-204ENST00000546961 FOXO3O43524 673 aa29.87■■■□□ 2.37
SCN8A-204ENST00000546961 SPATA31E1Q6ZUB1 1445 aa29.86■■■□□ 2.37
SCN8A-204ENST00000546961 XPCQ01831 940 aaPredicted RBP29.85■■■□□ 2.37
SCN8A-204ENST00000546961 USP21Q9UK80 565 aa29.85■■■□□ 2.37
SCN8A-204ENST00000546961 NPHP3Q7Z494 1330 aa29.84■■■□□ 2.37
SCN8A-204ENST00000546961 LRPPRCP42704 1394 aaKnown RBP29.83■■■□□ 2.37
SCN8A-204ENST00000546961 ABCC11Q96J66 1382 aa29.81■■■□□ 2.36
SCN8A-204ENST00000546961 LAMC1P11047 1609 aa29.8■■■□□ 2.36
SCN8A-204ENST00000546961 FNBP4Q8N3X1 1017 aaPredicted RBP29.79■■■□□ 2.36
SCN8A-204ENST00000546961 TRPC5Q9UL62 973 aaPredicted RBP29.79■■■□□ 2.36
SCN8A-204ENST00000546961 PLEKHH1Q9ULM0 1364 aa29.78■■■□□ 2.36
SCN8A-204ENST00000546961 RGS12O14924 1447 aa29.78■■■□□ 2.36
SCN8A-204ENST00000546961 C14orf93Q9H972 538 aaKnown RBP29.76■■■□□ 2.35
SCN8A-204ENST00000546961 TECPR2O15040 1411 aa29.76■■■□□ 2.35
SCN8A-204ENST00000546961 ACIN1Q9UKV3 1341 aaKnown RBP29.75■■■□□ 2.35
SCN8A-204ENST00000546961 CDC42BPGQ6DT37 1551 aa29.74■■■□□ 2.35
SCN8A-204ENST00000546961 CFAP70Q5T0N1 1121 aa29.73■■■□□ 2.35
SCN8A-204ENST00000546961 PIK3C2GO75747 1445 aa29.72■■■□□ 2.35
SCN8A-204ENST00000546961 YTHDC2Q9H6S0 1430 aaKnown RBP29.72■■■□□ 2.35
SCN8A-204ENST00000546961 SIRT1Q96EB6 747 aa29.72■■■□□ 2.35
SCN8A-204ENST00000546961 PXDNQ92626 1479 aa29.7■■■□□ 2.35
SCN8A-204ENST00000546961 KRT28Q7Z3Y7 464 aa29.69■■■□□ 2.34
SCN8A-204ENST00000546961 MYOM2P54296 1465 aa29.68■■■□□ 2.34
SCN8A-204ENST00000546961 DHX57Q6P158 1386 aaKnown RBP29.67■■■□□ 2.34
SCN8A-204ENST00000546961 SAFB2Q14151 953 aaKnown RBP eCLIP29.67■■■□□ 2.34
SCN8A-204ENST00000546961 IFT172Q9UG01 1749 aa29.65■■■□□ 2.34
SCN8A-204ENST00000546961 ATRNO75882 1429 aa29.65■■■□□ 2.34
SCN8A-204ENST00000546961 SPATA31A3Q5VYP0 1347 aa29.65■■■□□ 2.34
SCN8A-204ENST00000546961 COL22A1Q8NFW1 1626 aaPredicted RBP29.64■■■□□ 2.34
SCN8A-204ENST00000546961 PRAM1Q96QH2 718 aa29.63■■■□□ 2.33
SCN8A-204ENST00000546961 PHF8Q9UPP1 1060 aa29.63■■■□□ 2.33
SCN8A-204ENST00000546961 ATAD2Q6PL18 1390 aa29.63■■■□□ 2.33
SCN8A-204ENST00000546961 BCL9LQ86UU0 1499 aa29.61■■■□□ 2.33
SCN8A-204ENST00000546961 PLEKHG5O94827 1062 aa29.61■■■□□ 2.33
SCN8A-204ENST00000546961 GJD4Q96KN9 370 aaPredicted RBP29.61■■■□□ 2.33
SCN8A-204ENST00000546961 POGKQ9P215 609 aa29.61■■■□□ 2.33
SCN8A-204ENST00000546961 PSME1Q06323 249 aa29.6■■■□□ 2.33
SCN8A-204ENST00000546961 RAB3GAP2Q9H2M9 1393 aa29.59■■■□□ 2.33
SCN8A-204ENST00000546961 KNDC1Q76NI1 1749 aa29.57■■■□□ 2.32
SCN8A-204ENST00000546961 HAP1P54257 671 aaPredicted RBP29.57■■■□□ 2.32
SCN8A-204ENST00000546961 UNC5CLQ8IV45 518 aa29.57■■■□□ 2.32
SCN8A-204ENST00000546961 KDM2AQ9Y2K7 1162 aa29.57■■■□□ 2.32
SCN8A-204ENST00000546961 NRXN1Q9ULB1 1477 aa29.56■■■□□ 2.32
SCN8A-204ENST00000546961 LMOD2Q6P5Q4 547 aa29.56■■■□□ 2.32
SCN8A-204ENST00000546961 FMN2Q9NZ56 1722 aa29.55■■■□□ 2.32
SCN8A-204ENST00000546961 CABLES1Q8TDN4 633 aa29.55■■■□□ 2.32
SCN8A-204ENST00000546961 PMFBP1Q8TBY8 1022 aa29.53■■■□□ 2.32
SCN8A-204ENST00000546961 TRAK1Q9UPV9 953 aa29.53■■■□□ 2.32
SCN8A-204ENST00000546961 DCAF11Q8TEB1 546 aa29.51■■■□□ 2.31
SCN8A-204ENST00000546961 HIRIP3Q9BW71 556 aaPredicted RBP29.49■■■□□ 2.31
SCN8A-204ENST00000546961 KIF1AQ12756 1690 aa29.48■■■□□ 2.31
SCN8A-204ENST00000546961 CCDC125Q86Z20 511 aa29.47■■■□□ 2.31
SCN8A-204ENST00000546961 TNS3Q68CZ2 1445 aa29.46■■■□□ 2.31
SCN8A-204ENST00000546961 MINK1Q8N4C8 1332 aaPredicted RBP29.45■■■□□ 2.31
SCN8A-204ENST00000546961 SLIT2O94813 1529 aa29.45■■■□□ 2.31
SCN8A-204ENST00000546961 MARF1Q9Y4F3 1742 aaKnown RBP29.45■■■□□ 2.31
SCN8A-204ENST00000546961 RGPD8O14715 1765 aaPredicted RBP29.45■■■□□ 2.31
SCN8A-204ENST00000546961 SBNO1A3KN83 1393 aa29.45■■■□□ 2.31
SCN8A-204ENST00000546961 CCDC9Q9Y3X0 531 aaKnown RBP29.43■■■□□ 2.3
SCN8A-204ENST00000546961 RALGAPBQ86X10 1494 aa29.42■■■□□ 2.3
SCN8A-204ENST00000546961 ARHGEF10O15013 1369 aa29.41■■■□□ 2.3
SCN8A-204ENST00000546961 FAM83GA6ND36 823 aa29.41■■■□□ 2.3
SCN8A-204ENST00000546961 VPS72Q15906 364 aa29.41■■■□□ 2.3
SCN8A-204ENST00000546961 ZRANB1Q9UGI0 708 aa29.41■■■□□ 2.3
SCN8A-204ENST00000546961 DLC1Q96QB1 1528 aa29.4■■■□□ 2.3
SCN8A-204ENST00000546961 SEPT12Q8IYM1 358 aa29.4■■■□□ 2.3
SCN8A-204ENST00000546961 ANKARQ7Z5J8 1434 aa29.39■■■□□ 2.3
SCN8A-204ENST00000546961 STAC3Q96MF2 364 aa29.39■■■□□ 2.3
SCN8A-204ENST00000546961 WASLO00401 505 aaPredicted RBP29.38■■■□□ 2.29
SCN8A-204ENST00000546961 HRCP23327 699 aa29.37■■■□□ 2.29
SCN8A-204ENST00000546961 ADGRB1O14514 1584 aa29.37■■■□□ 2.29
SCN8A-204ENST00000546961 USP32Q8NFA0 1604 aa29.36■■■□□ 2.29
SCN8A-204ENST00000546961 PRR36Q9H6K5 1346 aa29.36■■■□□ 2.29
SCN8A-204ENST00000546961 GPRASP1Q5JY77 1395 aa29.36■■■□□ 2.29
SCN8A-204ENST00000546961 NGDNQ8NEJ9 315 aaKnown RBP29.35■■■□□ 2.29
SCN8A-204ENST00000546961 GLI3P10071 1580 aa29.35■■■□□ 2.29
SCN8A-204ENST00000546961 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.32■■■□□ 2.28
SCN8A-204ENST00000546961 ONECUT3O60422 494 aaPredicted RBP29.32■■■□□ 2.28
SCN8A-204ENST00000546961 PAK3O75914 559 aaPredicted RBP29.32■■■□□ 2.28
SCN8A-204ENST00000546961 EIF3AQ14152 1382 aaKnown RBP29.31■■■□□ 2.28
SCN8A-204ENST00000546961 EP400Q96L91 3159 aa29.3■■■□□ 2.28
SCN8A-204ENST00000546961 BTG4Q9NY30 223 aa29.29■■■□□ 2.28
SCN8A-204ENST00000546961 A0A0G2JS52 829 aa29.28■■■□□ 2.28
SCN8A-204ENST00000546961 MYT1Q01538 1121 aa29.28■■■□□ 2.28
SCN8A-204ENST00000546961 SF3B2Q13435 895 aaKnown RBP29.28■■■□□ 2.28
SCN8A-204ENST00000546961 KRT27Q7Z3Y8 459 aa29.28■■■□□ 2.28
SCN8A-204ENST00000546961 DEFB132Q7Z7B7 95 aa29.27■■■□□ 2.28
SCN8A-204ENST00000546961 NUDT16Q96DE0 195 aaKnown RBP29.27■■■□□ 2.28
SCN8A-204ENST00000546961 BLMP54132 1417 aaPredicted RBP29.27■■■□□ 2.28
SCN8A-204ENST00000546961 ADGRB2O60241 1585 aa29.26■■■□□ 2.28
SCN8A-204ENST00000546961 FAM98CQ17RN3 349 aaKnown RBP29.24■■■□□ 2.27
SCN8A-204ENST00000546961 SRCAPQ6ZRS2 3230 aa29.23■■■□□ 2.27
SCN8A-204ENST00000546961 CDK19Q9BWU1 502 aa29.23■■■□□ 2.27
SCN8A-204ENST00000546961 TULP4Q9NRJ4 1543 aa29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms