RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 LAMC1P11047 1609 aa17.12■□□□□ 0.33
RAB5C-203ENST00000546881 RBM6P78332 1123 aaKnown RBP17.12■□□□□ 0.33
RAB5C-203ENST00000546881 RGS12O14924 1447 aa17.12■□□□□ 0.33
RAB5C-203ENST00000546881 NUTM2FA1L443 756 aa17.11■□□□□ 0.33
RAB5C-203ENST00000546881 MPHOSPH9Q99550 1183 aa17.11■□□□□ 0.33
RAB5C-203ENST00000546881 WAPLQ7Z5K2 1190 aa17.1■□□□□ 0.33
RAB5C-203ENST00000546881 CDC42BPGQ6DT37 1551 aa17.1■□□□□ 0.33
RAB5C-203ENST00000546881 XPCQ01831 940 aaPredicted RBP17.09■□□□□ 0.33
RAB5C-203ENST00000546881 TMEM132EQ6IEE7 984 aa17.09■□□□□ 0.33
RAB5C-203ENST00000546881 USP21Q9UK80 565 aa17.09■□□□□ 0.33
RAB5C-203ENST00000546881 ANKRD30BQ9BXX2 1392 aa17.08■□□□□ 0.32
RAB5C-203ENST00000546881 NPHP3Q7Z494 1330 aa17.08■□□□□ 0.32
RAB5C-203ENST00000546881 SPATA31E1Q6ZUB1 1445 aa17.07■□□□□ 0.32
RAB5C-203ENST00000546881 FOXO3O43524 673 aa17.07■□□□□ 0.32
RAB5C-203ENST00000546881 IFT172Q9UG01 1749 aa17.07■□□□□ 0.32
RAB5C-203ENST00000546881 LRPPRCP42704 1394 aaKnown RBP17.06■□□□□ 0.32
RAB5C-203ENST00000546881 PLEKHH1Q9ULM0 1364 aa17.05■□□□□ 0.32
RAB5C-203ENST00000546881 TRPC5Q9UL62 973 aaPredicted RBP17.05■□□□□ 0.32
RAB5C-203ENST00000546881 COL22A1Q8NFW1 1626 aaPredicted RBP17.05■□□□□ 0.32
RAB5C-203ENST00000546881 PXDNQ92626 1479 aa17.04■□□□□ 0.32
RAB5C-203ENST00000546881 TECPR2O15040 1411 aa17.04■□□□□ 0.32
RAB5C-203ENST00000546881 PIK3C2GO75747 1445 aa17.03■□□□□ 0.32
RAB5C-203ENST00000546881 ABCC11Q96J66 1382 aa17.02■□□□□ 0.32
RAB5C-203ENST00000546881 KNDC1Q76NI1 1749 aa17.02■□□□□ 0.32
RAB5C-203ENST00000546881 MYOM2P54296 1465 aa17.02■□□□□ 0.32
RAB5C-203ENST00000546881 FNBP4Q8N3X1 1017 aaPredicted RBP17.02■□□□□ 0.32
RAB5C-203ENST00000546881 YTHDC2Q9H6S0 1430 aaKnown RBP17.02■□□□□ 0.31
RAB5C-203ENST00000546881 ATAD2Q6PL18 1390 aa17.01■□□□□ 0.31
RAB5C-203ENST00000546881 FMN2Q9NZ56 1722 aa16.99■□□□□ 0.31
RAB5C-203ENST00000546881 ATRNO75882 1429 aa16.99■□□□□ 0.31
RAB5C-203ENST00000546881 PLEKHG5O94827 1062 aa16.98■□□□□ 0.31
RAB5C-203ENST00000546881 SAFB2Q14151 953 aaKnown RBP eCLIP16.98■□□□□ 0.31
RAB5C-203ENST00000546881 CFAP70Q5T0N1 1121 aa16.98■□□□□ 0.31
RAB5C-203ENST00000546881 MARF1Q9Y4F3 1742 aaKnown RBP16.97■□□□□ 0.31
RAB5C-203ENST00000546881 C14orf93Q9H972 538 aaKnown RBP16.97■□□□□ 0.31
RAB5C-203ENST00000546881 KIF1AQ12756 1690 aa16.97■□□□□ 0.31
RAB5C-203ENST00000546881 HAP1P54257 671 aaPredicted RBP16.96■□□□□ 0.31
RAB5C-203ENST00000546881 KRT28Q7Z3Y7 464 aa16.96■□□□□ 0.31
RAB5C-203ENST00000546881 DHX57Q6P158 1386 aaKnown RBP16.96■□□□□ 0.31
RAB5C-203ENST00000546881 BCL9LQ86UU0 1499 aa16.96■□□□□ 0.31
RAB5C-203ENST00000546881 SPATA31A3Q5VYP0 1347 aa16.96■□□□□ 0.3
RAB5C-203ENST00000546881 ACIN1Q9UKV3 1341 aaKnown RBP16.95■□□□□ 0.3
RAB5C-203ENST00000546881 LMOD2Q6P5Q4 547 aa16.94■□□□□ 0.3
RAB5C-203ENST00000546881 PRAM1Q96QH2 718 aa16.94■□□□□ 0.3
RAB5C-203ENST00000546881 PHF8Q9UPP1 1060 aa16.94■□□□□ 0.3
RAB5C-203ENST00000546881 SIRT1Q96EB6 747 aa16.93■□□□□ 0.3
RAB5C-203ENST00000546881 GJD4Q96KN9 370 aaPredicted RBP16.93■□□□□ 0.3
RAB5C-203ENST00000546881 POGKQ9P215 609 aa16.93■□□□□ 0.3
RAB5C-203ENST00000546881 NRXN1Q9ULB1 1477 aa16.93■□□□□ 0.3
RAB5C-203ENST00000546881 RGPD8O14715 1765 aaPredicted RBP16.92■□□□□ 0.3
RAB5C-203ENST00000546881 PSME1Q06323 249 aa16.92■□□□□ 0.3
RAB5C-203ENST00000546881 RAB3GAP2Q9H2M9 1393 aa16.91■□□□□ 0.3
RAB5C-203ENST00000546881 UNC5CLQ8IV45 518 aa16.91■□□□□ 0.3
RAB5C-203ENST00000546881 CABLES1Q8TDN4 633 aa16.91■□□□□ 0.3
RAB5C-203ENST00000546881 TNS3Q68CZ2 1445 aa16.9■□□□□ 0.3
RAB5C-203ENST00000546881 USP32Q8NFA0 1604 aa16.9■□□□□ 0.3
RAB5C-203ENST00000546881 PMFBP1Q8TBY8 1022 aa16.89■□□□□ 0.29
RAB5C-203ENST00000546881 KDM2AQ9Y2K7 1162 aa16.89■□□□□ 0.29
RAB5C-203ENST00000546881 RALGAPBQ86X10 1494 aa16.88■□□□□ 0.29
RAB5C-203ENST00000546881 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.88■□□□□ 0.29
RAB5C-203ENST00000546881 SLIT2O94813 1529 aa16.88■□□□□ 0.29
RAB5C-203ENST00000546881 TRAK1Q9UPV9 953 aa16.88■□□□□ 0.29
RAB5C-203ENST00000546881 CCDC9Q9Y3X0 531 aaKnown RBP16.88■□□□□ 0.29
RAB5C-203ENST00000546881 HIRIP3Q9BW71 556 aaPredicted RBP16.87■□□□□ 0.29
RAB5C-203ENST00000546881 GLI3P10071 1580 aa16.86■□□□□ 0.29
RAB5C-203ENST00000546881 ZRANB1Q9UGI0 708 aa16.86■□□□□ 0.29
RAB5C-203ENST00000546881 DLC1Q96QB1 1528 aa16.86■□□□□ 0.29
RAB5C-203ENST00000546881 DCAF11Q8TEB1 546 aa16.85■□□□□ 0.29
RAB5C-203ENST00000546881 MINK1Q8N4C8 1332 aaPredicted RBP16.85■□□□□ 0.29
RAB5C-203ENST00000546881 SBNO1A3KN83 1393 aa16.85■□□□□ 0.29
RAB5C-203ENST00000546881 ARHGEF10O15013 1369 aa16.85■□□□□ 0.29
RAB5C-203ENST00000546881 CCDC125Q86Z20 511 aa16.84■□□□□ 0.29
RAB5C-203ENST00000546881 ANKARQ7Z5J8 1434 aa16.84■□□□□ 0.29
RAB5C-203ENST00000546881 ADGRB1O14514 1584 aa16.83■□□□□ 0.28
RAB5C-203ENST00000546881 PLCH1Q4KWH8 1693 aa16.83■□□□□ 0.28
RAB5C-203ENST00000546881 ABCA3Q99758 1704 aa16.82■□□□□ 0.28
RAB5C-203ENST00000546881 ADGRB2O60241 1585 aa16.82■□□□□ 0.28
RAB5C-203ENST00000546881 A0A0G2JS52 829 aa16.82■□□□□ 0.28
RAB5C-203ENST00000546881 MYT1Q01538 1121 aa16.82■□□□□ 0.28
RAB5C-203ENST00000546881 VPS72Q15906 364 aa16.82■□□□□ 0.28
RAB5C-203ENST00000546881 SEPT12Q8IYM1 358 aa16.82■□□□□ 0.28
RAB5C-203ENST00000546881 GPRASP1Q5JY77 1395 aa16.8■□□□□ 0.28
RAB5C-203ENST00000546881 BRWD3Q6RI45 1802 aa16.8■□□□□ 0.28
RAB5C-203ENST00000546881 NWD2Q9ULI1 1742 aa16.79■□□□□ 0.28
RAB5C-203ENST00000546881 EIF3AQ14152 1382 aaKnown RBP16.79■□□□□ 0.28
RAB5C-203ENST00000546881 FAM83GA6ND36 823 aa16.79■□□□□ 0.28
RAB5C-203ENST00000546881 SF3B2Q13435 895 aaKnown RBP16.79■□□□□ 0.28
RAB5C-203ENST00000546881 BLMP54132 1417 aaPredicted RBP16.79■□□□□ 0.28
RAB5C-203ENST00000546881 PRR36Q9H6K5 1346 aa16.78■□□□□ 0.28
RAB5C-203ENST00000546881 WASLO00401 505 aaPredicted RBP16.78■□□□□ 0.28
RAB5C-203ENST00000546881 PAK3O75914 559 aaPredicted RBP16.78■□□□□ 0.28
RAB5C-203ENST00000546881 NGDNQ8NEJ9 315 aaKnown RBP16.78■□□□□ 0.28
RAB5C-203ENST00000546881 TULP4Q9NRJ4 1543 aa16.78■□□□□ 0.28
RAB5C-203ENST00000546881 TRPM3Q9HCF6 1732 aaPredicted RBP16.77■□□□□ 0.28
RAB5C-203ENST00000546881 EP400Q96L91 3159 aa16.77■□□□□ 0.27
RAB5C-203ENST00000546881 KRT27Q7Z3Y8 459 aa16.76■□□□□ 0.27
RAB5C-203ENST00000546881 DEFB132Q7Z7B7 95 aa16.76■□□□□ 0.27
RAB5C-203ENST00000546881 BTG4Q9NY30 223 aa16.76■□□□□ 0.27
RAB5C-203ENST00000546881 FAM98CQ17RN3 349 aaKnown RBP16.75■□□□□ 0.27
RAB5C-203ENST00000546881 ALS2Q96Q42 1657 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms