RNA–Protein interactions for RNA: ENST00000546606.1

ZFC3H1-203, Transcript of zinc finger C3H1-type containing, humanhuman

TSL 2

Gene ZFC3H1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFC3H1-203ENST00000546606 PHOX2BQ99453 314 aa9.55□□□□□ -0.88
ZFC3H1-203ENST00000546606 NFX1Q12986 1120 aaKnown RBP9.53□□□□□ -0.88
ZFC3H1-203ENST00000546606 BRICD5Q6PL45 260 aa9.53□□□□□ -0.88
ZFC3H1-203ENST00000546606 CTC1Q2NKJ3 1217 aa9.52□□□□□ -0.89
ZFC3H1-203ENST00000546606 INSM1Q01101 510 aaPredicted RBP9.51□□□□□ -0.89
ZFC3H1-203ENST00000546606 GRIPAP1Q4V328 841 aa9.51□□□□□ -0.89
ZFC3H1-203ENST00000546606 MSS51Q4VC12 460 aa9.51□□□□□ -0.89
ZFC3H1-203ENST00000546606 TRIM32Q13049 653 aa9.5□□□□□ -0.89
ZFC3H1-203ENST00000546606 GPIHBP1Q8IV16 184 aa9.5□□□□□ -0.89
ZFC3H1-203ENST00000546606 SALL2Q9Y467 1007 aaPredicted RBP9.5□□□□□ -0.89
ZFC3H1-203ENST00000546606 WNT7AO00755 349 aa9.48□□□□□ -0.89
ZFC3H1-203ENST00000546606 SMPD1P17405 629 aa9.48□□□□□ -0.89
ZFC3H1-203ENST00000546606 MRGPRX2Q96LB1 330 aa9.48□□□□□ -0.89
ZFC3H1-203ENST00000546606 J3QL48 77 aa9.47□□□□□ -0.89
ZFC3H1-203ENST00000546606 SMCPP49901 116 aaPredicted RBP9.47□□□□□ -0.89
ZFC3H1-203ENST00000546606 LCE2CQ5TA81 110 aa9.47□□□□□ -0.89
ZFC3H1-203ENST00000546606 CCDC24Q8N4L8 307 aa9.47□□□□□ -0.89
ZFC3H1-203ENST00000546606 SNIP1Q8TAD8 396 aaKnown RBP9.47□□□□□ -0.89
ZFC3H1-203ENST00000546606 ATP13A2Q9NQ11 1180 aa9.47□□□□□ -0.89
ZFC3H1-203ENST00000546606 Q3C1V9 767 aa9.46□□□□□ -0.9
ZFC3H1-203ENST00000546606 SNRPBP14678 240 aaKnown RBP9.45□□□□□ -0.9
ZFC3H1-203ENST00000546606 HLA-CQ95604 372 aa9.45□□□□□ -0.9
ZFC3H1-203ENST00000546606 MMP16P51512 607 aa9.43□□□□□ -0.9
ZFC3H1-203ENST00000546606 HPS1Q92902 700 aa9.43□□□□□ -0.9
ZFC3H1-203ENST00000546606 USB1Q9BQ65 265 aaKnown RBP9.43□□□□□ -0.9
ZFC3H1-203ENST00000546606 KDM4AO75164 1064 aa9.42□□□□□ -0.9
ZFC3H1-203ENST00000546606 CD46P15529 392 aa9.42□□□□□ -0.9
ZFC3H1-203ENST00000546606 DXOO77932 396 aaKnown RBP9.4□□□□□ -0.9
ZFC3H1-203ENST00000546606 MDM2Q00987 491 aaPredicted RBP9.4□□□□□ -0.9
ZFC3H1-203ENST00000546606 TRIM47Q96LD4 638 aa9.4□□□□□ -0.9
ZFC3H1-203ENST00000546606 REPIN1Q9BWE0 567 aaKnown RBP9.4□□□□□ -0.9
ZFC3H1-203ENST00000546606 GUCA2AQ02747 115 aa9.39□□□□□ -0.91
ZFC3H1-203ENST00000546606 RC3H1Q5TC82 1133 aaKnown RBP9.39□□□□□ -0.91
ZFC3H1-203ENST00000546606 SENP2Q9HC62 589 aa9.39□□□□□ -0.91
ZFC3H1-203ENST00000546606 SKOR1P84550 965 aa9.38□□□□□ -0.91
ZFC3H1-203ENST00000546606 TERTO14746 1132 aaKnown RBP9.37□□□□□ -0.91
ZFC3H1-203ENST00000546606 ALDH1A1P00352 501 aa9.37□□□□□ -0.91
ZFC3H1-203ENST00000546606 MAP2K5Q13163 448 aa9.36□□□□□ -0.91
ZFC3H1-203ENST00000546606 SYMPKQ92797 1274 aaKnown RBP9.36□□□□□ -0.91
ZFC3H1-203ENST00000546606 HOXA2O43364 376 aa9.35□□□□□ -0.91
ZFC3H1-203ENST00000546606 PLCB2Q00722 1185 aa9.35□□□□□ -0.91
ZFC3H1-203ENST00000546606 BMP1P13497 986 aa9.33□□□□□ -0.92
ZFC3H1-203ENST00000546606 WNT7BP56706 349 aa9.33□□□□□ -0.92
ZFC3H1-203ENST00000546606 USP46P62068 366 aa9.33□□□□□ -0.92
ZFC3H1-203ENST00000546606 KIFC2Q96AC6 838 aa9.33□□□□□ -0.92
ZFC3H1-203ENST00000546606 JUNDP17535 347 aa9.32□□□□□ -0.92
ZFC3H1-203ENST00000546606 EHBP1Q8NDI1 1231 aa9.32□□□□□ -0.92
ZFC3H1-203ENST00000546606 IRF6O14896 467 aa9.3□□□□□ -0.92
ZFC3H1-203ENST00000546606 HAP1P54257 671 aaPredicted RBP9.3□□□□□ -0.92
ZFC3H1-203ENST00000546606 CCDC102AQ96A19 550 aa9.3□□□□□ -0.92
ZFC3H1-203ENST00000546606 NUDT12Q9BQG2 462 aa9.3□□□□□ -0.92
ZFC3H1-203ENST00000546606 WASF2Q9Y6W5 498 aa9.29□□□□□ -0.92
ZFC3H1-203ENST00000546606 SUZ12Q15022 739 aaKnown RBP9.28□□□□□ -0.92
ZFC3H1-203ENST00000546606 PTCRAQ6ISU1 281 aaPredicted RBP9.28□□□□□ -0.92
ZFC3H1-203ENST00000546606 NUTM1Q86Y26 1132 aa9.28□□□□□ -0.92
ZFC3H1-203ENST00000546606 LORP23490 312 aaPredicted RBP9.27□□□□□ -0.93
ZFC3H1-203ENST00000546606 VEGFBP49765 207 aa9.27□□□□□ -0.93
ZFC3H1-203ENST00000546606 SLC16A10Q8TF71 515 aa9.27□□□□□ -0.93
ZFC3H1-203ENST00000546606 FAM181BA6NEQ2 426 aa9.26□□□□□ -0.93
ZFC3H1-203ENST00000546606 C6orf229H3BNL8 230 aa9.26□□□□□ -0.93
ZFC3H1-203ENST00000546606 TULP1O00294 542 aaPredicted RBP9.26□□□□□ -0.93
ZFC3H1-203ENST00000546606 CAPN5O15484 640 aaPredicted RBP9.26□□□□□ -0.93
ZFC3H1-203ENST00000546606 RETREG3Q86VR2 466 aa9.26□□□□□ -0.93
ZFC3H1-203ENST00000546606 KRI1Q8N9T8 703 aaKnown RBP9.26□□□□□ -0.93
ZFC3H1-203ENST00000546606 GPCPD1Q9NPB8 672 aa9.26□□□□□ -0.93
ZFC3H1-203ENST00000546606 LINC01559Q495D7 138 aa9.25□□□□□ -0.93
ZFC3H1-203ENST00000546606 TRIM46Q7Z4K8 759 aa9.25□□□□□ -0.93
ZFC3H1-203ENST00000546606 NXF1Q9UBU9 619 aaKnown RBP9.25□□□□□ -0.93
ZFC3H1-203ENST00000546606 MINK1Q8N4C8 1332 aaPredicted RBP9.25□□□□□ -0.93
ZFC3H1-203ENST00000546606 CLCN1P35523 988 aa9.24□□□□□ -0.93
ZFC3H1-203ENST00000546606 FAM217BQ9NTX9 383 aaPredicted RBP9.24□□□□□ -0.93
ZFC3H1-203ENST00000546606 SIAH2O43255 324 aa9.23□□□□□ -0.93
ZFC3H1-203ENST00000546606 FDX1P10109 184 aa9.23□□□□□ -0.93
ZFC3H1-203ENST00000546606 GMPRP36959 345 aa9.23□□□□□ -0.93
ZFC3H1-203ENST00000546606 TLL2Q9Y6L7 1015 aa9.23□□□□□ -0.93
ZFC3H1-203ENST00000546606 CCNYL3P0C7X3 344 aa9.22□□□□□ -0.93
ZFC3H1-203ENST00000546606 MS4A1P11836 297 aa9.22□□□□□ -0.93
ZFC3H1-203ENST00000546606 SH3BP2P78314 561 aa9.22□□□□□ -0.93
ZFC3H1-203ENST00000546606 PCDHGC3Q9UN70 934 aa9.21□□□□□ -0.94
ZFC3H1-203ENST00000546606 KDM2AQ9Y2K7 1162 aa9.21□□□□□ -0.94
ZFC3H1-203ENST00000546606 IRF7Q92985 503 aa9.2□□□□□ -0.94
ZFC3H1-203ENST00000546606 UNC93B1Q9H1C4 597 aa9.2□□□□□ -0.94
ZFC3H1-203ENST00000546606 ZSCAN1Q8NBB4 408 aa9.18□□□□□ -0.94
ZFC3H1-203ENST00000546606 BAP1Q92560 729 aa9.18□□□□□ -0.94
ZFC3H1-203ENST00000546606 ZFP42Q96MM3 310 aa9.18□□□□□ -0.94
ZFC3H1-203ENST00000546606 NDUFV2P19404 249 aa9.17□□□□□ -0.94
ZFC3H1-203ENST00000546606 ERBB4Q15303 1308 aa9.16□□□□□ -0.94
ZFC3H1-203ENST00000546606 PTPRNQ16849 979 aa9.16□□□□□ -0.94
ZFC3H1-203ENST00000546606 H3BM21 787 aa9.15□□□□□ -0.94
ZFC3H1-203ENST00000546606 NNTQ13423 1086 aa9.15□□□□□ -0.94
ZFC3H1-203ENST00000546606 MOXD2PA6NHM9 499 aa9.14□□□□□ -0.95
ZFC3H1-203ENST00000546606 SOBPA7XYQ1 873 aa9.14□□□□□ -0.95
ZFC3H1-203ENST00000546606 TTLL12Q14166 644 aaPredicted RBP9.14□□□□□ -0.95
ZFC3H1-203ENST00000546606 ZNF511Q8NB15 262 aa9.14□□□□□ -0.95
ZFC3H1-203ENST00000546606 PRR7Q8TB68 274 aa9.14□□□□□ -0.95
ZFC3H1-203ENST00000546606 SPIRE2Q8WWL2 714 aa9.14□□□□□ -0.95
ZFC3H1-203ENST00000546606 SSTR3P32745 418 aaPredicted RBP9.13□□□□□ -0.95
ZFC3H1-203ENST00000546606 KCNH2Q12809 1159 aa9.13□□□□□ -0.95
ZFC3H1-203ENST00000546606 NPAS3Q8IXF0 933 aa9.13□□□□□ -0.95
ZFC3H1-203ENST00000546606 PURBQ96QR8 312 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms