RNA–Protein interactions for RNA: ENST00000546490.1

CHPT1-202, Transcript of choline phosphotransferase 1, humanhuman

TSL 2

Gene CHPT1, Length 476 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-202ENST00000546490 MYOM2P54296 1465 aa27.77■■■□□ 2.04
CHPT1-202ENST00000546490 FMN2Q9NZ56 1722 aa27.76■■■□□ 2.03
CHPT1-202ENST00000546490 COL22A1Q8NFW1 1626 aaPredicted RBP27.74■■■□□ 2.03
CHPT1-202ENST00000546490 ORAI2Q96SN7 254 aa27.74■■■□□ 2.03
CHPT1-202ENST00000546490 NRXN1Q9ULB1 1477 aa27.74■■■□□ 2.03
CHPT1-202ENST00000546490 YTHDC2Q9H6S0 1430 aaKnown RBP27.73■■■□□ 2.03
CHPT1-202ENST00000546490 ABCC11Q96J66 1382 aa27.73■■■□□ 2.03
CHPT1-202ENST00000546490 SOS2Q07890 1332 aaPredicted RBP27.72■■■□□ 2.03
CHPT1-202ENST00000546490 STK26Q9P289 416 aa27.72■■■□□ 2.03
CHPT1-202ENST00000546490 KIF1AQ12756 1690 aa27.71■■■□□ 2.03
CHPT1-202ENST00000546490 AFF2P51816 1311 aa27.7■■■□□ 2.03
CHPT1-202ENST00000546490 TMEM132EQ6IEE7 984 aa27.68■■■□□ 2.02
CHPT1-202ENST00000546490 CDK12Q9NYV4 1490 aaPredicted RBP27.68■■■□□ 2.02
CHPT1-202ENST00000546490 MARF1Q9Y4F3 1742 aaKnown RBP27.67■■■□□ 2.02
CHPT1-202ENST00000546490 NPHP3Q7Z494 1330 aa27.67■■■□□ 2.02
CHPT1-202ENST00000546490 PXDNQ92626 1479 aa27.66■■■□□ 2.02
CHPT1-202ENST00000546490 PLEKHH1Q9ULM0 1364 aa27.66■■■□□ 2.02
CHPT1-202ENST00000546490 WAPLQ7Z5K2 1190 aa27.66■■■□□ 2.02
CHPT1-202ENST00000546490 C8orf37Q96NL8 207 aa27.66■■■□□ 2.02
CHPT1-202ENST00000546490 ESCO1Q5FWF5 840 aa27.65■■■□□ 2.02
CHPT1-202ENST00000546490 RXRBP28702 533 aa27.64■■■□□ 2.02
CHPT1-202ENST00000546490 RGPD8O14715 1765 aaPredicted RBP27.63■■■□□ 2.01
CHPT1-202ENST00000546490 C14orf93Q9H972 538 aaKnown RBP27.62■■■□□ 2.01
CHPT1-202ENST00000546490 DHX57Q6P158 1386 aaKnown RBP27.61■■■□□ 2.01
CHPT1-202ENST00000546490 DLC1Q96QB1 1528 aa27.6■■■□□ 2.01
CHPT1-202ENST00000546490 ADAMTS2O95450 1211 aa27.59■■■□□ 2.01
CHPT1-202ENST00000546490 SIRT1Q96EB6 747 aa27.58■■■□□ 2.01
CHPT1-202ENST00000546490 NUTM2FA1L443 756 aa27.57■■■□□ 2
CHPT1-202ENST00000546490 CFAP70Q5T0N1 1121 aa27.57■■■□□ 2
CHPT1-202ENST00000546490 ADGRB1O14514 1584 aa27.56■■■□□ 2
CHPT1-202ENST00000546490 ADGRB2O60241 1585 aa27.56■■■□□ 2
CHPT1-202ENST00000546490 NGLY1Q96IV0 654 aa27.56■■■□□ 2
CHPT1-202ENST00000546490 FOXO3O43524 673 aa27.55■■■□□ 2
CHPT1-202ENST00000546490 RGS12O14924 1447 aa27.54■■■□□ 2
CHPT1-202ENST00000546490 RBM6P78332 1123 aaKnown RBP27.52■■■□□ 2
CHPT1-202ENST00000546490 XPCQ01831 940 aaPredicted RBP27.52■■■□□ 2
CHPT1-202ENST00000546490 QTRT2Q9H974 415 aaKnown RBP27.52■■■□□ 2
CHPT1-202ENST00000546490 HRCP23327 699 aa27.51■■□□□ 1.99
CHPT1-202ENST00000546490 USP32Q8NFA0 1604 aa27.5■■□□□ 1.99
CHPT1-202ENST00000546490 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.5■■□□□ 1.99
CHPT1-202ENST00000546490 PRAM1Q96QH2 718 aa27.49■■□□□ 1.99
CHPT1-202ENST00000546490 UPF1Q92900 1129 aaKnown RBP eCLIP27.47■■□□□ 1.99
CHPT1-202ENST00000546490 USP21Q9UK80 565 aa27.47■■□□□ 1.99
CHPT1-202ENST00000546490 ABCA3Q99758 1704 aa27.47■■□□□ 1.99
CHPT1-202ENST00000546490 ARHGEF28Q8N1W1 1705 aaKnown RBP27.46■■□□□ 1.99
CHPT1-202ENST00000546490 ANKARQ7Z5J8 1434 aa27.45■■□□□ 1.98
CHPT1-202ENST00000546490 SAFB2Q14151 953 aaKnown RBP eCLIP27.45■■□□□ 1.98
CHPT1-202ENST00000546490 FNBP4Q8N3X1 1017 aaPredicted RBP27.45■■□□□ 1.98
CHPT1-202ENST00000546490 POGKQ9P215 609 aa27.45■■□□□ 1.98
CHPT1-202ENST00000546490 ATRNO75882 1429 aa27.44■■□□□ 1.98
CHPT1-202ENST00000546490 TNS3Q68CZ2 1445 aa27.44■■□□□ 1.98
CHPT1-202ENST00000546490 DCAF11Q8TEB1 546 aa27.44■■□□□ 1.98
CHPT1-202ENST00000546490 TRPC5Q9UL62 973 aaPredicted RBP27.44■■□□□ 1.98
CHPT1-202ENST00000546490 SPATA31A3Q5VYP0 1347 aa27.43■■□□□ 1.98
CHPT1-202ENST00000546490 STAC3Q96MF2 364 aa27.43■■□□□ 1.98
CHPT1-202ENST00000546490 PHF8Q9UPP1 1060 aa27.43■■□□□ 1.98
CHPT1-202ENST00000546490 KDM2AQ9Y2K7 1162 aa27.42■■□□□ 1.98
CHPT1-202ENST00000546490 ITSN1Q15811 1721 aa27.41■■□□□ 1.98
CHPT1-202ENST00000546490 EIF3AQ14152 1382 aaKnown RBP27.4■■□□□ 1.98
CHPT1-202ENST00000546490 KRT28Q7Z3Y7 464 aa27.4■■□□□ 1.98
CHPT1-202ENST00000546490 KIAA1210Q9ULL0 1709 aa27.4■■□□□ 1.98
CHPT1-202ENST00000546490 TRAK1Q9UPV9 953 aa27.39■■□□□ 1.98
CHPT1-202ENST00000546490 TULP4Q9NRJ4 1543 aa27.39■■□□□ 1.98
CHPT1-202ENST00000546490 PLCH1Q4KWH8 1693 aa27.39■■□□□ 1.97
CHPT1-202ENST00000546490 TRPM3Q9HCF6 1732 aaPredicted RBP27.38■■□□□ 1.97
CHPT1-202ENST00000546490 BCL9LQ86UU0 1499 aa27.38■■□□□ 1.97
CHPT1-202ENST00000546490 PSME1Q06323 249 aa27.37■■□□□ 1.97
CHPT1-202ENST00000546490 SBNO1A3KN83 1393 aa27.36■■□□□ 1.97
CHPT1-202ENST00000546490 NWD2Q9ULI1 1742 aa27.36■■□□□ 1.97
CHPT1-202ENST00000546490 SLIT2O94813 1529 aa27.34■■□□□ 1.97
CHPT1-202ENST00000546490 ARHGEF10O15013 1369 aa27.34■■□□□ 1.97
CHPT1-202ENST00000546490 ATAD2Q6PL18 1390 aa27.34■■□□□ 1.97
CHPT1-202ENST00000546490 ALS2Q96Q42 1657 aa27.33■■□□□ 1.97
CHPT1-202ENST00000546490 HIRIP3Q9BW71 556 aaPredicted RBP27.32■■□□□ 1.96
CHPT1-202ENST00000546490 MINK1Q8N4C8 1332 aaPredicted RBP27.32■■□□□ 1.96
CHPT1-202ENST00000546490 HAP1P54257 671 aaPredicted RBP27.31■■□□□ 1.96
CHPT1-202ENST00000546490 EP400Q96L91 3159 aa27.3■■□□□ 1.96
CHPT1-202ENST00000546490 PMFBP1Q8TBY8 1022 aa27.29■■□□□ 1.96
CHPT1-202ENST00000546490 GLI3P10071 1580 aa27.29■■□□□ 1.96
CHPT1-202ENST00000546490 LMOD2Q6P5Q4 547 aa27.27■■□□□ 1.96
CHPT1-202ENST00000546490 CRYBG1Q9Y4K1 1723 aa27.27■■□□□ 1.96
CHPT1-202ENST00000546490 WASLO00401 505 aaPredicted RBP27.26■■□□□ 1.95
CHPT1-202ENST00000546490 UNC5CLQ8IV45 518 aa27.26■■□□□ 1.95
CHPT1-202ENST00000546490 TOPAZ1Q8N9V7 1692 aa27.26■■□□□ 1.95
CHPT1-202ENST00000546490 ATP7BP35670 1465 aa27.25■■□□□ 1.95
CHPT1-202ENST00000546490 RALGAPBQ86X10 1494 aa27.25■■□□□ 1.95
CHPT1-202ENST00000546490 GPRASP1Q5JY77 1395 aa27.25■■□□□ 1.95
CHPT1-202ENST00000546490 PRR36Q9H6K5 1346 aa27.25■■□□□ 1.95
CHPT1-202ENST00000546490 GJD4Q96KN9 370 aaPredicted RBP27.25■■□□□ 1.95
CHPT1-202ENST00000546490 NRAPQ86VF7 1730 aa27.24■■□□□ 1.95
CHPT1-202ENST00000546490 BRWD3Q6RI45 1802 aa27.23■■□□□ 1.95
CHPT1-202ENST00000546490 CABLES1Q8TDN4 633 aa27.23■■□□□ 1.95
CHPT1-202ENST00000546490 PLEKHG5O94827 1062 aa27.21■■□□□ 1.95
CHPT1-202ENST00000546490 COL14A1Q05707 1796 aaKnown RBP27.21■■□□□ 1.95
CHPT1-202ENST00000546490 PHRF1Q9P1Y6 1649 aaKnown RBP27.16■■□□□ 1.94
CHPT1-202ENST00000546490 NGDNQ8NEJ9 315 aaKnown RBP27.16■■□□□ 1.94
CHPT1-202ENST00000546490 QRICH2Q9H0J4 1663 aa27.16■■□□□ 1.94
CHPT1-202ENST00000546490 VPS72Q15906 364 aa27.13■■□□□ 1.93
CHPT1-202ENST00000546490 NUDT16Q96DE0 195 aaKnown RBP27.12■■□□□ 1.93
CHPT1-202ENST00000546490 PAK3O75914 559 aaPredicted RBP27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms