RNA–Protein interactions for RNA: ENST00000546471.5

RRN3P1-202, Transcript of RRN3 homolog, RNA polymerase I transcription factor pseudogene 1, humanhuman

TSL 1 (best)

Gene RRN3P1, Length 2,608 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRN3P1-202ENST00000546471 USP19O94966 1318 aa12.09□□□□□ -0.47
RRN3P1-202ENST00000546471 SHPRHQ149N8 1683 aa12.09□□□□□ -0.47
RRN3P1-202ENST00000546471 ADGRL1O94910 1474 aa12.08□□□□□ -0.48
RRN3P1-202ENST00000546471 MROH2AA6NES4 1674 aa12.08□□□□□ -0.48
RRN3P1-202ENST00000546471 RARSP54136 660 aaKnown RBP12.08□□□□□ -0.48
RRN3P1-202ENST00000546471 ZMYM3Q14202 1370 aa12.08□□□□□ -0.48
RRN3P1-202ENST00000546471 IQSEC2Q5JU85 1478 aa12.08□□□□□ -0.48
RRN3P1-202ENST00000546471 NEUROD2Q15784 382 aa12.07□□□□□ -0.48
RRN3P1-202ENST00000546471 WDR63Q8IWG1 891 aa12.07□□□□□ -0.48
RRN3P1-202ENST00000546471 UPF2Q9HAU5 1272 aaKnown RBP12.07□□□□□ -0.48
RRN3P1-202ENST00000546471 TCP11L2Q8N4U5 519 aa12.07□□□□□ -0.48
RRN3P1-202ENST00000546471 NOS1P29475 1434 aa12.07□□□□□ -0.48
RRN3P1-202ENST00000546471 CFAP53Q96M91 514 aa12.07□□□□□ -0.48
RRN3P1-202ENST00000546471 RRP7AQ9Y3A4 280 aaKnown RBP12.07□□□□□ -0.48
RRN3P1-202ENST00000546471 ADGRB3O60242 1522 aa12.06□□□□□ -0.48
RRN3P1-202ENST00000546471 PPRC1Q5VV67 1664 aaKnown RBP12.06□□□□□ -0.48
RRN3P1-202ENST00000546471 TNNT2P45379 298 aaPredicted RBP12.06□□□□□ -0.48
RRN3P1-202ENST00000546471 ANO8Q9HCE9 1232 aaPredicted RBP12.06□□□□□ -0.48
RRN3P1-202ENST00000546471 LMTK2Q8IWU2 1503 aa12.06□□□□□ -0.48
RRN3P1-202ENST00000546471 SEC24BO95487 1268 aa12.06□□□□□ -0.48
RRN3P1-202ENST00000546471 PHF23Q9BUL5 403 aaPredicted RBP12.06□□□□□ -0.48
RRN3P1-202ENST00000546471 USP32Q8NFA0 1604 aa12.05□□□□□ -0.48
RRN3P1-202ENST00000546471 CCDC27Q2M243 656 aa12.05□□□□□ -0.48
RRN3P1-202ENST00000546471 NLRP1Q9C000 1473 aa12.05□□□□□ -0.48
RRN3P1-202ENST00000546471 ZC3H13Q5T200 1668 aaKnown RBP12.05□□□□□ -0.48
RRN3P1-202ENST00000546471 QRICH2Q9H0J4 1663 aa12.05□□□□□ -0.48
RRN3P1-202ENST00000546471 MYH16Q9H6N6 1097 aa12.05□□□□□ -0.48
RRN3P1-202ENST00000546471 TRAK1Q9UPV9 953 aa12.05□□□□□ -0.48
RRN3P1-202ENST00000546471 ZNF518AQ6AHZ1 1483 aa12.04□□□□□ -0.48
RRN3P1-202ENST00000546471 CHGAP10645 457 aaKnown RBP12.04□□□□□ -0.48
RRN3P1-202ENST00000546471 SLC12A5Q9H2X9 1139 aa12.04□□□□□ -0.48
RRN3P1-202ENST00000546471 RWDD1Q9H446 243 aaPredicted RBP12.04□□□□□ -0.48
RRN3P1-202ENST00000546471 PCDHB15Q9Y5E8 787 aa12.03□□□□□ -0.48
RRN3P1-202ENST00000546471 MTHFSP49914 203 aa12.03□□□□□ -0.48
RRN3P1-202ENST00000546471 NCBP3Q53F19 620 aaKnown RBP12.03□□□□□ -0.48
RRN3P1-202ENST00000546471 C14orf93Q9H972 538 aaKnown RBP12.03□□□□□ -0.48
RRN3P1-202ENST00000546471 RLBP1P12271 317 aa12.02□□□□□ -0.49
RRN3P1-202ENST00000546471 PDZRN3Q9UPQ7 1066 aa12.02□□□□□ -0.49
RRN3P1-202ENST00000546471 TBC1D32Q96NH3 1257 aa12.02□□□□□ -0.49
RRN3P1-202ENST00000546471 BCL2L13Q9BXK5 485 aa12.02□□□□□ -0.49
RRN3P1-202ENST00000546471 ADGRB1O14514 1584 aa12.02□□□□□ -0.49
RRN3P1-202ENST00000546471 NSD2O96028 1365 aa12.01□□□□□ -0.49
RRN3P1-202ENST00000546471 SLKQ9H2G2 1235 aaPredicted RBP12.01□□□□□ -0.49
RRN3P1-202ENST00000546471 PPLO60437 1756 aa12.01□□□□□ -0.49
RRN3P1-202ENST00000546471 KIDINS220Q9ULH0 1771 aa12.01□□□□□ -0.49
RRN3P1-202ENST00000546471 RPGRIP1LQ68CZ1 1315 aa12□□□□□ -0.49
RRN3P1-202ENST00000546471 MVPQ14764 893 aaKnown RBP12□□□□□ -0.49
RRN3P1-202ENST00000546471 TNNQ9UQP3 1299 aa12□□□□□ -0.49
RRN3P1-202ENST00000546471 CT47B1P0C2W7 299 aaPredicted RBP11.99□□□□□ -0.49
RRN3P1-202ENST00000546471 ZKSCAN2Q63HK3 967 aa11.99□□□□□ -0.49
RRN3P1-202ENST00000546471 FTSJ3Q8IY81 847 aaKnown RBP11.99□□□□□ -0.49
RRN3P1-202ENST00000546471 PUS7Q96PZ0 661 aaKnown RBP11.99□□□□□ -0.49
RRN3P1-202ENST00000546471 EVC2Q86UK5 1308 aa11.99□□□□□ -0.49
RRN3P1-202ENST00000546471 U2AF1L5P0DN76 240 aaPredicted RBP11.99□□□□□ -0.49
RRN3P1-202ENST00000546471 U2AF1Q01081 240 aaKnown RBP eCLIP11.99□□□□□ -0.49
RRN3P1-202ENST00000546471 ANKRD36BQ8N2N9 1353 aa11.98□□□□□ -0.49
RRN3P1-202ENST00000546471 ANTXR1Q9H6X2 564 aa11.98□□□□□ -0.49
RRN3P1-202ENST00000546471 NPATQ14207 1427 aa11.98□□□□□ -0.49
RRN3P1-202ENST00000546471 TMEM132EQ6IEE7 984 aa11.98□□□□□ -0.49
RRN3P1-202ENST00000546471 DZIP1LQ8IYY4 767 aaKnown RBP11.98□□□□□ -0.49
RRN3P1-202ENST00000546471 POGKQ9P215 609 aa11.98□□□□□ -0.49
RRN3P1-202ENST00000546471 ADGRB2O60241 1585 aa11.98□□□□□ -0.49
RRN3P1-202ENST00000546471 FAM43AQ8N2R8 423 aa11.97□□□□□ -0.49
RRN3P1-202ENST00000546471 TBC1D2Q9BYX2 928 aa11.97□□□□□ -0.49
RRN3P1-202ENST00000546471 GLI2P10070 1586 aa11.97□□□□□ -0.49
RRN3P1-202ENST00000546471 L1TD1Q5T7N2 865 aaKnown RBP11.96□□□□□ -0.49
RRN3P1-202ENST00000546471 ASXL2Q76L83 1435 aa11.96□□□□□ -0.5
RRN3P1-202ENST00000546471 SMC4Q9NTJ3 1288 aa11.95□□□□□ -0.5
RRN3P1-202ENST00000546471 TULP4Q9NRJ4 1543 aa11.95□□□□□ -0.5
RRN3P1-202ENST00000546471 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.95□□□□□ -0.5
RRN3P1-202ENST00000546471 DDX19BQ9UMR2 479 aa11.94□□□□□ -0.5
RRN3P1-202ENST00000546471 HECW2Q9P2P5 1572 aa11.94□□□□□ -0.5
RRN3P1-202ENST00000546471 ARHGEF28Q8N1W1 1705 aaKnown RBP11.94□□□□□ -0.5
RRN3P1-202ENST00000546471 HDAC1Q13547 482 aaPredicted RBP11.93□□□□□ -0.5
RRN3P1-202ENST00000546471 GGT6Q6P531 493 aa11.93□□□□□ -0.5
RRN3P1-202ENST00000546471 TSR2Q969E8 191 aaKnown RBP11.93□□□□□ -0.5
RRN3P1-202ENST00000546471 C22orf23Q9BZE7 217 aa11.93□□□□□ -0.5
RRN3P1-202ENST00000546471 VGFO15240 615 aaPredicted RBP11.92□□□□□ -0.5
RRN3P1-202ENST00000546471 U2SURPO15042 1029 aaKnown RBP11.92□□□□□ -0.5
RRN3P1-202ENST00000546471 TRIM27P14373 513 aa11.92□□□□□ -0.5
RRN3P1-202ENST00000546471 EXOSC9Q06265 439 aaKnown RBP11.92□□□□□ -0.5
RRN3P1-202ENST00000546471 ITPRIPQ8IWB1 547 aa11.92□□□□□ -0.5
RRN3P1-202ENST00000546471 ABCC3O15438 1527 aa11.92□□□□□ -0.5
RRN3P1-202ENST00000546471 FRMPD1Q5SYB0 1578 aa11.92□□□□□ -0.5
RRN3P1-202ENST00000546471 ABCC11Q96J66 1382 aa11.92□□□□□ -0.5
RRN3P1-202ENST00000546471 POGZQ7Z3K3 1410 aa11.92□□□□□ -0.5
RRN3P1-202ENST00000546471 MFAP1P55081 439 aaKnown RBP11.91□□□□□ -0.5
RRN3P1-202ENST00000546471 CABP2Q9NPB3 220 aa11.91□□□□□ -0.5
RRN3P1-202ENST00000546471 CFAP74Q9C0B2 1584 aa11.91□□□□□ -0.5
RRN3P1-202ENST00000546471 MLH3Q9UHC1 1453 aa11.91□□□□□ -0.5
RRN3P1-202ENST00000546471 TMPOP42166 694 aaKnown RBP11.91□□□□□ -0.5
RRN3P1-202ENST00000546471 ATF7IPQ6VMQ6 1270 aa11.91□□□□□ -0.5
RRN3P1-202ENST00000546471 IL16Q14005 1332 aa11.91□□□□□ -0.5
RRN3P1-202ENST00000546471 CAMSAP1Q5T5Y3 1602 aa11.91□□□□□ -0.5
RRN3P1-202ENST00000546471 SSH1Q8WYL5 1049 aa11.9□□□□□ -0.5
RRN3P1-202ENST00000546471 PLEKHF1Q96S99 279 aa11.9□□□□□ -0.5
RRN3P1-202ENST00000546471 CD109Q6YHK3 1445 aa11.9□□□□□ -0.5
RRN3P1-202ENST00000546471 CFAP65Q6ZU64 1925 aaKnown RBP11.9□□□□□ -0.5
RRN3P1-202ENST00000546471 CHMP5Q9NZZ3 219 aa11.9□□□□□ -0.5
RRN3P1-202ENST00000546471 A0A1W2PP64 1363 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms