RNA–Protein interactions for RNA: ENST00000546318.2

IFIT1-202, Transcript of interferon induced protein with tetratricopeptide repeats 1, humanhuman

TSL 3 BASIC

Gene IFIT1, Length 4,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFIT1-202ENST00000546318 ATAD2Q6PL18 1390 aa8.64□□□□□ -1.03
IFIT1-202ENST00000546318 CARD14Q9BXL6 1004 aa8.64□□□□□ -1.03
IFIT1-202ENST00000546318 YTHDC2Q9H6S0 1430 aaKnown RBP8.64□□□□□ -1.03
IFIT1-202ENST00000546318 CFAP53Q96M91 514 aa8.63□□□□□ -1.03
IFIT1-202ENST00000546318 DLC1Q96QB1 1528 aa8.63□□□□□ -1.03
IFIT1-202ENST00000546318 ESF1Q9H501 851 aaKnown RBP8.63□□□□□ -1.03
IFIT1-202ENST00000546318 PTPRMP28827 1452 aa8.63□□□□□ -1.03
IFIT1-202ENST00000546318 GOLGA2Q08379 1002 aa8.63□□□□□ -1.03
IFIT1-202ENST00000546318 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.62□□□□□ -1.03
IFIT1-202ENST00000546318 ANKRD26Q9UPS8 1709 aa8.62□□□□□ -1.03
IFIT1-202ENST00000546318 SHPRHQ149N8 1683 aa8.62□□□□□ -1.03
IFIT1-202ENST00000546318 CDCA7LQ96GN5 454 aa8.62□□□□□ -1.03
IFIT1-202ENST00000546318 POGKQ9P215 609 aa8.62□□□□□ -1.03
IFIT1-202ENST00000546318 RIMS2Q9UQ26 1411 aa8.61□□□□□ -1.03
IFIT1-202ENST00000546318 PLEKHH1Q9ULM0 1364 aa8.61□□□□□ -1.03
IFIT1-202ENST00000546318 A2ML1A8K2U0 1454 aa8.61□□□□□ -1.03
IFIT1-202ENST00000546318 SLC12A5Q9H2X9 1139 aa8.61□□□□□ -1.03
IFIT1-202ENST00000546318 SRPK2P78362 688 aaKnown RBP8.61□□□□□ -1.03
IFIT1-202ENST00000546318 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.61□□□□□ -1.03
IFIT1-202ENST00000546318 FBXO31Q5XUX0 539 aaPredicted RBP8.6□□□□□ -1.03
IFIT1-202ENST00000546318 TERF2IPQ9NYB0 399 aa8.6□□□□□ -1.03
IFIT1-202ENST00000546318 ZNF521Q96K83 1311 aa8.6□□□□□ -1.03
IFIT1-202ENST00000546318 STK26Q9P289 416 aa8.6□□□□□ -1.03
IFIT1-202ENST00000546318 E9PSI1 815 aa8.6□□□□□ -1.03
IFIT1-202ENST00000546318 NKTRP30414 1462 aaKnown RBP8.6□□□□□ -1.03
IFIT1-202ENST00000546318 MED14O60244 1454 aa8.6□□□□□ -1.03
IFIT1-202ENST00000546318 FANCIQ9NVI1 1328 aa8.59□□□□□ -1.03
IFIT1-202ENST00000546318 KIF20BQ96Q89 1820 aa8.59□□□□□ -1.03
IFIT1-202ENST00000546318 HDGFP51858 240 aaKnown RBP8.59□□□□□ -1.03
IFIT1-202ENST00000546318 CCDC146Q8IYE0 955 aa8.59□□□□□ -1.03
IFIT1-202ENST00000546318 CABP2Q9NPB3 220 aa8.59□□□□□ -1.03
IFIT1-202ENST00000546318 ABCC11Q96J66 1382 aa8.59□□□□□ -1.03
IFIT1-202ENST00000546318 SETD1AO15047 1707 aaKnown RBP8.59□□□□□ -1.03
IFIT1-202ENST00000546318 PRAM1Q96QH2 718 aa8.59□□□□□ -1.03
IFIT1-202ENST00000546318 KNDC1Q76NI1 1749 aa8.59□□□□□ -1.03
IFIT1-202ENST00000546318 HDGFL2Q7Z4V5 671 aaPredicted RBP8.58□□□□□ -1.04
IFIT1-202ENST00000546318 EXOC6Q8TAG9 804 aa8.58□□□□□ -1.04
IFIT1-202ENST00000546318 A0A1W2PP64 1363 aa8.58□□□□□ -1.04
IFIT1-202ENST00000546318 SLFN5Q08AF3 891 aa8.58□□□□□ -1.04
IFIT1-202ENST00000546318 SAFB2Q14151 953 aaKnown RBP eCLIP8.58□□□□□ -1.04
IFIT1-202ENST00000546318 DUSP27Q5VZP5 1158 aa8.58□□□□□ -1.04
IFIT1-202ENST00000546318 IQSEC2Q5JU85 1478 aa8.58□□□□□ -1.04
IFIT1-202ENST00000546318 RUNDC1Q96C34 613 aa8.58□□□□□ -1.04
IFIT1-202ENST00000546318 MLECQ14165 292 aa8.57□□□□□ -1.04
IFIT1-202ENST00000546318 MINK1Q8N4C8 1332 aaPredicted RBP8.57□□□□□ -1.04
IFIT1-202ENST00000546318 APAF1O14727 1248 aa8.57□□□□□ -1.04
IFIT1-202ENST00000546318 ATP7BP35670 1465 aa8.57□□□□□ -1.04
IFIT1-202ENST00000546318 TNNT2P45379 298 aaPredicted RBP8.57□□□□□ -1.04
IFIT1-202ENST00000546318 TNRQ92752 1358 aa8.56□□□□□ -1.04
IFIT1-202ENST00000546318 ZMYM3Q14202 1370 aa8.56□□□□□ -1.04
IFIT1-202ENST00000546318 NRXN3Q9Y4C0 1643 aa8.56□□□□□ -1.04
IFIT1-202ENST00000546318 NCBP3Q53F19 620 aaKnown RBP8.55□□□□□ -1.04
IFIT1-202ENST00000546318 ERICH6Q7L0X2 663 aa8.55□□□□□ -1.04
IFIT1-202ENST00000546318 MTHFSP49914 203 aa8.55□□□□□ -1.04
IFIT1-202ENST00000546318 TRMT2AQ8IZ69 625 aaKnown RBP8.55□□□□□ -1.04
IFIT1-202ENST00000546318 CPS1P31327 1500 aa8.55□□□□□ -1.04
IFIT1-202ENST00000546318 CRBNQ96SW2 442 aa8.55□□□□□ -1.04
IFIT1-202ENST00000546318 CDK19Q9BWU1 502 aa8.55□□□□□ -1.04
IFIT1-202ENST00000546318 ADGRB2O60241 1585 aa8.54□□□□□ -1.04
IFIT1-202ENST00000546318 UBR1Q8IWV7 1749 aa8.54□□□□□ -1.04
IFIT1-202ENST00000546318 TCERG1O14776 1098 aaKnown RBP8.54□□□□□ -1.04
IFIT1-202ENST00000546318 CD163L1Q9NR16 1453 aa8.54□□□□□ -1.04
IFIT1-202ENST00000546318 PLIN1O60240 522 aa8.53□□□□□ -1.04
IFIT1-202ENST00000546318 PNNQ9H307 717 aaKnown RBP8.53□□□□□ -1.04
IFIT1-202ENST00000546318 SENP3Q9H4L4 574 aaPredicted RBP8.53□□□□□ -1.04
IFIT1-202ENST00000546318 FAM135BQ49AJ0 1406 aa8.53□□□□□ -1.04
IFIT1-202ENST00000546318 NLRP1Q9C000 1473 aa8.53□□□□□ -1.04
IFIT1-202ENST00000546318 CCDC27Q2M243 656 aa8.53□□□□□ -1.04
IFIT1-202ENST00000546318 WDR63Q8IWG1 891 aa8.53□□□□□ -1.04
IFIT1-202ENST00000546318 WWC1Q8IX03 1113 aa8.53□□□□□ -1.04
IFIT1-202ENST00000546318 ANP32EQ9BTT0 268 aa8.53□□□□□ -1.04
IFIT1-202ENST00000546318 CANXP27824 592 aaKnown RBP8.52□□□□□ -1.05
IFIT1-202ENST00000546318 MYH16Q9H6N6 1097 aa8.52□□□□□ -1.05
IFIT1-202ENST00000546318 TECPR2O15040 1411 aa8.52□□□□□ -1.05
IFIT1-202ENST00000546318 COL3A1P02461 1466 aaPredicted RBP8.52□□□□□ -1.05
IFIT1-202ENST00000546318 ANP32AP39687 249 aaKnown RBP8.52□□□□□ -1.05
IFIT1-202ENST00000546318 U2AF1L5P0DN76 240 aaPredicted RBP8.52□□□□□ -1.05
IFIT1-202ENST00000546318 MS4A1P11836 297 aa8.52□□□□□ -1.05
IFIT1-202ENST00000546318 U2AF1Q01081 240 aaKnown RBP eCLIP8.52□□□□□ -1.05
IFIT1-202ENST00000546318 SIRT1Q96EB6 747 aa8.52□□□□□ -1.05
IFIT1-202ENST00000546318 MAPK8IP3Q9UPT6 1336 aa8.52□□□□□ -1.05
IFIT1-202ENST00000546318 CDC42BPGQ6DT37 1551 aa8.51□□□□□ -1.05
IFIT1-202ENST00000546318 ITSN1Q15811 1721 aa8.51□□□□□ -1.05
IFIT1-202ENST00000546318 CENPQQ7L2Z9 268 aaPredicted RBP8.51□□□□□ -1.05
IFIT1-202ENST00000546318 TCP11L2Q8N4U5 519 aa8.51□□□□□ -1.05
IFIT1-202ENST00000546318 TMEM2Q9UHN6 1383 aa8.51□□□□□ -1.05
IFIT1-202ENST00000546318 EDC4Q6P2E9 1401 aaKnown RBP8.51□□□□□ -1.05
IFIT1-202ENST00000546318 GGNBP2Q9H3C7 697 aa8.5□□□□□ -1.05
IFIT1-202ENST00000546318 PPIP5K1Q6PFW1 1433 aa8.5□□□□□ -1.05
IFIT1-202ENST00000546318 CABP1Q9NZU7 370 aa8.5□□□□□ -1.05
IFIT1-202ENST00000546318 MON2Q7Z3U7 1717 aa8.5□□□□□ -1.05
IFIT1-202ENST00000546318 NEFMP07197 916 aa8.5□□□□□ -1.05
IFIT1-202ENST00000546318 PLEKHG1Q9ULL1 1385 aa8.49□□□□□ -1.05
IFIT1-202ENST00000546318 FYB1O15117 783 aa8.49□□□□□ -1.05
IFIT1-202ENST00000546318 WASLO00401 505 aaPredicted RBP8.49□□□□□ -1.05
IFIT1-202ENST00000546318 METP08581 1390 aa8.49□□□□□ -1.05
IFIT1-202ENST00000546318 FER1L4A9Z1Z3 1794 aa8.49□□□□□ -1.05
IFIT1-202ENST00000546318 U2SURPO15042 1029 aaKnown RBP8.49□□□□□ -1.05
IFIT1-202ENST00000546318 NEUROD2Q15784 382 aa8.49□□□□□ -1.05
IFIT1-202ENST00000546318 DIAPH1O60610 1272 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms