RNA–Protein interactions for RNA: ENST00000546309.6

KDM1B-203, Transcript of lysine demethylase 1B, humanhuman

TSL 1 (best) BASIC

Gene KDM1B, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1B-203ENST00000546309 NRXN1Q9ULB1 1477 aa11.12□□□□□ -0.63
KDM1B-203ENST00000546309 SPATA31A6Q5VVP1 1343 aa11.12□□□□□ -0.63
KDM1B-203ENST00000546309 SIN3AQ96ST3 1273 aa11.12□□□□□ -0.63
KDM1B-203ENST00000546309 PXDNQ92626 1479 aa11.12□□□□□ -0.63
KDM1B-203ENST00000546309 PIK3C2GO75747 1445 aa11.11□□□□□ -0.63
KDM1B-203ENST00000546309 ZNF772Q68DY9 489 aaPredicted RBP11.11□□□□□ -0.63
KDM1B-203ENST00000546309 RPGRIP1LQ68CZ1 1315 aa11.1□□□□□ -0.63
KDM1B-203ENST00000546309 NUTM2BA6NNL0 878 aaPredicted RBP11.1□□□□□ -0.63
KDM1B-203ENST00000546309 NUTM2EB1AL46 878 aaPredicted RBP11.1□□□□□ -0.63
KDM1B-203ENST00000546309 RGL3Q3MIN7 710 aa11.1□□□□□ -0.63
KDM1B-203ENST00000546309 NUTM2AQ8IVF1 878 aaPredicted RBP11.1□□□□□ -0.63
KDM1B-203ENST00000546309 COL22A1Q8NFW1 1626 aaPredicted RBP11.09□□□□□ -0.63
KDM1B-203ENST00000546309 KNDC1Q76NI1 1749 aa11.09□□□□□ -0.63
KDM1B-203ENST00000546309 CDC42BPGQ6DT37 1551 aa11.09□□□□□ -0.63
KDM1B-203ENST00000546309 VGFO15240 615 aaPredicted RBP11.09□□□□□ -0.63
KDM1B-203ENST00000546309 UPF1Q92900 1129 aaKnown RBP eCLIP11.09□□□□□ -0.63
KDM1B-203ENST00000546309 USP32Q8NFA0 1604 aa11.09□□□□□ -0.63
KDM1B-203ENST00000546309 AFF2P51816 1311 aa11.09□□□□□ -0.63
KDM1B-203ENST00000546309 MYOM2P54296 1465 aa11.08□□□□□ -0.64
KDM1B-203ENST00000546309 LRPPRCP42704 1394 aaKnown RBP11.08□□□□□ -0.64
KDM1B-203ENST00000546309 ABCC11Q96J66 1382 aa11.08□□□□□ -0.64
KDM1B-203ENST00000546309 FMN2Q9NZ56 1722 aa11.08□□□□□ -0.64
KDM1B-203ENST00000546309 RGS12O14924 1447 aa11.08□□□□□ -0.64
KDM1B-203ENST00000546309 ADGRB1O14514 1584 aa11.07□□□□□ -0.64
KDM1B-203ENST00000546309 TONSLQ96HA7 1378 aa11.07□□□□□ -0.64
KDM1B-203ENST00000546309 XPCQ01831 940 aaPredicted RBP11.07□□□□□ -0.64
KDM1B-203ENST00000546309 RXRBP28702 533 aa11.06□□□□□ -0.64
KDM1B-203ENST00000546309 NEUROD1Q13562 356 aa11.06□□□□□ -0.64
KDM1B-203ENST00000546309 CFAP70Q5T0N1 1121 aa11.06□□□□□ -0.64
KDM1B-203ENST00000546309 C14orf93Q9H972 538 aaKnown RBP11.06□□□□□ -0.64
KDM1B-203ENST00000546309 BCL9LQ86UU0 1499 aa11.06□□□□□ -0.64
KDM1B-203ENST00000546309 NUTM2FA1L443 756 aa11.05□□□□□ -0.64
KDM1B-203ENST00000546309 CCDC144AA2RUR9 1427 aa11.05□□□□□ -0.64
KDM1B-203ENST00000546309 LRRC59Q96AG4 307 aaKnown RBP11.05□□□□□ -0.64
KDM1B-203ENST00000546309 YTHDC2Q9H6S0 1430 aaKnown RBP11.05□□□□□ -0.64
KDM1B-203ENST00000546309 STK26Q9P289 416 aa11.05□□□□□ -0.64
KDM1B-203ENST00000546309 MARF1Q9Y4F3 1742 aaKnown RBP11.04□□□□□ -0.64
KDM1B-203ENST00000546309 ZNF316A6NFI3 1004 aaPredicted RBP11.03□□□□□ -0.64
KDM1B-203ENST00000546309 FOXO3O43524 673 aa11.03□□□□□ -0.64
KDM1B-203ENST00000546309 ADAMTS2O95450 1211 aa11.03□□□□□ -0.64
KDM1B-203ENST00000546309 FNBP4Q8N3X1 1017 aaPredicted RBP11.03□□□□□ -0.64
KDM1B-203ENST00000546309 CDK12Q9NYV4 1490 aaPredicted RBP11.03□□□□□ -0.64
KDM1B-203ENST00000546309 C8orf37Q96NL8 207 aa11.02□□□□□ -0.65
KDM1B-203ENST00000546309 EP400Q96L91 3159 aa11.02□□□□□ -0.65
KDM1B-203ENST00000546309 PRR36Q9H6K5 1346 aa11.02□□□□□ -0.65
KDM1B-203ENST00000546309 ATRNO75882 1429 aa11.01□□□□□ -0.65
KDM1B-203ENST00000546309 QTRT2Q9H974 415 aaKnown RBP11.01□□□□□ -0.65
KDM1B-203ENST00000546309 GLI3P10071 1580 aa11.01□□□□□ -0.65
KDM1B-203ENST00000546309 ABCA3Q99758 1704 aa11.01□□□□□ -0.65
KDM1B-203ENST00000546309 L3MBTL2Q969R5 705 aa11□□□□□ -0.65
KDM1B-203ENST00000546309 TRPM3Q9HCF6 1732 aaPredicted RBP11□□□□□ -0.65
KDM1B-203ENST00000546309 ESCO1Q5FWF5 840 aa10.99□□□□□ -0.65
KDM1B-203ENST00000546309 SIRT1Q96EB6 747 aa10.99□□□□□ -0.65
KDM1B-203ENST00000546309 STAC3Q96MF2 364 aa10.99□□□□□ -0.65
KDM1B-203ENST00000546309 BRWD3Q6RI45 1802 aa10.99□□□□□ -0.65
KDM1B-203ENST00000546309 SPATA31A3Q5VYP0 1347 aa10.99□□□□□ -0.65
KDM1B-203ENST00000546309 CRYBG1Q9Y4K1 1723 aa10.98□□□□□ -0.65
KDM1B-203ENST00000546309 CABLES1Q8TDN4 633 aa10.98□□□□□ -0.65
KDM1B-203ENST00000546309 SLIT2O94813 1529 aa10.98□□□□□ -0.65
KDM1B-203ENST00000546309 DLC1Q96QB1 1528 aa10.98□□□□□ -0.65
KDM1B-203ENST00000546309 SRCAPQ6ZRS2 3230 aa10.96□□□□□ -0.65
KDM1B-203ENST00000546309 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.96□□□□□ -0.65
KDM1B-203ENST00000546309 ADGRB2O60241 1585 aa10.96□□□□□ -0.65
KDM1B-203ENST00000546309 RBM6P78332 1123 aaKnown RBP10.96□□□□□ -0.65
KDM1B-203ENST00000546309 SAFB2Q14151 953 aaKnown RBP eCLIP10.96□□□□□ -0.65
KDM1B-203ENST00000546309 NGLY1Q96IV0 654 aa10.96□□□□□ -0.65
KDM1B-203ENST00000546309 PRAM1Q96QH2 718 aa10.96□□□□□ -0.65
KDM1B-203ENST00000546309 ARHGEF28Q8N1W1 1705 aaKnown RBP10.95□□□□□ -0.66
KDM1B-203ENST00000546309 ALS2Q96Q42 1657 aa10.95□□□□□ -0.66
KDM1B-203ENST00000546309 USP21Q9UK80 565 aa10.95□□□□□ -0.66
KDM1B-203ENST00000546309 KIF1AQ12756 1690 aa10.95□□□□□ -0.66
KDM1B-203ENST00000546309 NPHP3Q7Z494 1330 aa10.94□□□□□ -0.66
KDM1B-203ENST00000546309 KRT28Q7Z3Y7 464 aa10.94□□□□□ -0.66
KDM1B-203ENST00000546309 NRAPQ86VF7 1730 aa10.93□□□□□ -0.66
KDM1B-203ENST00000546309 PLCH1Q4KWH8 1693 aa10.93□□□□□ -0.66
KDM1B-203ENST00000546309 HIRIP3Q9BW71 556 aaPredicted RBP10.93□□□□□ -0.66
KDM1B-203ENST00000546309 RALGAPBQ86X10 1494 aa10.93□□□□□ -0.66
KDM1B-203ENST00000546309 PMFBP1Q8TBY8 1022 aa10.92□□□□□ -0.66
KDM1B-203ENST00000546309 PHF8Q9UPP1 1060 aa10.92□□□□□ -0.66
KDM1B-203ENST00000546309 TRAK1Q9UPV9 953 aa10.92□□□□□ -0.66
KDM1B-203ENST00000546309 ATAD2Q6PL18 1390 aa10.91□□□□□ -0.66
KDM1B-203ENST00000546309 FAM83GA6ND36 823 aa10.91□□□□□ -0.66
KDM1B-203ENST00000546309 NBPF1Q3BBV0 1214 aa10.91□□□□□ -0.66
KDM1B-203ENST00000546309 KDM2AQ9Y2K7 1162 aa10.91□□□□□ -0.66
KDM1B-203ENST00000546309 TNS3Q68CZ2 1445 aa10.91□□□□□ -0.66
KDM1B-203ENST00000546309 ATP7BP35670 1465 aa10.9□□□□□ -0.66
KDM1B-203ENST00000546309 NBPF8Q3BBV2 869 aa10.9□□□□□ -0.66
KDM1B-203ENST00000546309 DCAF11Q8TEB1 546 aa10.9□□□□□ -0.66
KDM1B-203ENST00000546309 GJD4Q96KN9 370 aaPredicted RBP10.9□□□□□ -0.66
KDM1B-203ENST00000546309 TRPC5Q9UL62 973 aaPredicted RBP10.9□□□□□ -0.66
KDM1B-203ENST00000546309 SBNO1A3KN83 1393 aa10.9□□□□□ -0.67
KDM1B-203ENST00000546309 MINK1Q8N4C8 1332 aaPredicted RBP10.89□□□□□ -0.67
KDM1B-203ENST00000546309 TOPAZ1Q8N9V7 1692 aa10.89□□□□□ -0.67
KDM1B-203ENST00000546309 ONECUT3O60422 494 aaPredicted RBP10.88□□□□□ -0.67
KDM1B-203ENST00000546309 ANKARQ7Z5J8 1434 aa10.88□□□□□ -0.67
KDM1B-203ENST00000546309 ZRANB1Q9UGI0 708 aa10.88□□□□□ -0.67
KDM1B-203ENST00000546309 TULP4Q9NRJ4 1543 aa10.88□□□□□ -0.67
KDM1B-203ENST00000546309 NWD2Q9ULI1 1742 aa10.87□□□□□ -0.67
KDM1B-203ENST00000546309 WASLO00401 505 aaPredicted RBP10.87□□□□□ -0.67
KDM1B-203ENST00000546309 PLEKHG5O94827 1062 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms