RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 SENP3Q9H4L4 574 aaPredicted RBP10.12□□□□□ -0.79
UBR1-202ENST00000546274 ZNF521Q96K83 1311 aa10.11□□□□□ -0.79
UBR1-202ENST00000546274 NEURL4Q96JN8 1562 aa10.11□□□□□ -0.79
UBR1-202ENST00000546274 CRBNQ96SW2 442 aa10.11□□□□□ -0.79
UBR1-202ENST00000546274 FAM13BQ9NYF5 915 aa10.11□□□□□ -0.79
UBR1-202ENST00000546274 ASXL1Q8IXJ9 1541 aa10.11□□□□□ -0.79
UBR1-202ENST00000546274 MROH1Q8NDA8 1641 aa10.11□□□□□ -0.79
UBR1-202ENST00000546274 PPP2R1AP30153 589 aa10.11□□□□□ -0.79
UBR1-202ENST00000546274 C20orf194Q5TEA3 1177 aa10.11□□□□□ -0.79
UBR1-202ENST00000546274 GOLGA6L3A6NEY3 463 aa10.1□□□□□ -0.79
UBR1-202ENST00000546274 RTEL1-TNFRSF6BF6WH68 1400 aa10.1□□□□□ -0.79
UBR1-202ENST00000546274 KCNA4P22459 653 aa10.1□□□□□ -0.79
UBR1-202ENST00000546274 ABCA6Q8N139 1617 aa10.1□□□□□ -0.79
UBR1-202ENST00000546274 CENPJQ9HC77 1338 aaPredicted RBP10.1□□□□□ -0.79
UBR1-202ENST00000546274 TPM2P07951 284 aa10.1□□□□□ -0.79
UBR1-202ENST00000546274 MROH2AA6NES4 1674 aa10.09□□□□□ -0.79
UBR1-202ENST00000546274 ESPNB1AK53 854 aa10.09□□□□□ -0.79
UBR1-202ENST00000546274 KDM2BQ8NHM5 1336 aa10.09□□□□□ -0.79
UBR1-202ENST00000546274 PIK3C2GO75747 1445 aa10.09□□□□□ -0.79
UBR1-202ENST00000546274 VGLL3A8MV65 326 aa10.09□□□□□ -0.79
UBR1-202ENST00000546274 EFCAB2Q5VUJ9 269 aa10.09□□□□□ -0.79
UBR1-202ENST00000546274 DUSP27Q5VZP5 1158 aa10.09□□□□□ -0.79
UBR1-202ENST00000546274 KIAA1211Q6ZU35 1233 aa10.09□□□□□ -0.79
UBR1-202ENST00000546274 SLKQ9H2G2 1235 aaPredicted RBP10.09□□□□□ -0.79
UBR1-202ENST00000546274 RICTORQ6R327 1708 aa10.09□□□□□ -0.79
UBR1-202ENST00000546274 ATP7AQ04656 1500 aa10.08□□□□□ -0.8
UBR1-202ENST00000546274 MYO3AQ8NEV4 1616 aa10.08□□□□□ -0.8
UBR1-202ENST00000546274 KIF1BO60333 1816 aa10.08□□□□□ -0.8
UBR1-202ENST00000546274 UGGT1Q9NYU2 1555 aa10.08□□□□□ -0.8
UBR1-202ENST00000546274 NPC1L1Q9UHC9 1359 aa10.07□□□□□ -0.8
UBR1-202ENST00000546274 ERBB4Q15303 1308 aa10.07□□□□□ -0.8
UBR1-202ENST00000546274 ADGRL1O94910 1474 aa10.07□□□□□ -0.8
UBR1-202ENST00000546274 FRMPD1Q5SYB0 1578 aa10.06□□□□□ -0.8
UBR1-202ENST00000546274 ERVK-7P63135 1459 aa10.06□□□□□ -0.8
UBR1-202ENST00000546274 VIRMAQ69YN4 1812 aaKnown RBP10.06□□□□□ -0.8
UBR1-202ENST00000546274 AFAP1Q8N556 730 aa10.06□□□□□ -0.8
UBR1-202ENST00000546274 KNSTRNQ9Y448 316 aa10.06□□□□□ -0.8
UBR1-202ENST00000546274 ZC3H13Q5T200 1668 aaKnown RBP10.06□□□□□ -0.8
UBR1-202ENST00000546274 TRIM44Q96DX7 344 aaPredicted RBP10.06□□□□□ -0.8
UBR1-202ENST00000546274 MYOM2P54296 1465 aa10.06□□□□□ -0.8
UBR1-202ENST00000546274 SPAG9O60271 1321 aaKnown RBP10.05□□□□□ -0.8
UBR1-202ENST00000546274 TRMT2AQ8IZ69 625 aaKnown RBP10.05□□□□□ -0.8
UBR1-202ENST00000546274 SHPRHQ149N8 1683 aa10.05□□□□□ -0.8
UBR1-202ENST00000546274 MYH16Q9H6N6 1097 aa10.05□□□□□ -0.8
UBR1-202ENST00000546274 POGZQ7Z3K3 1410 aa10.05□□□□□ -0.8
UBR1-202ENST00000546274 IPO4Q8TEX9 1081 aaKnown RBP10.04□□□□□ -0.8
UBR1-202ENST00000546274 ARHGEF40Q8TER5 1519 aa10.04□□□□□ -0.8
UBR1-202ENST00000546274 ZNF518AQ6AHZ1 1483 aa10.04□□□□□ -0.8
UBR1-202ENST00000546274 EFCAB6Q5THR3 1501 aa10.04□□□□□ -0.8
UBR1-202ENST00000546274 NRXN1Q9ULB1 1477 aa10.03□□□□□ -0.8
UBR1-202ENST00000546274 KIDINS220Q9ULH0 1771 aa10.03□□□□□ -0.8
UBR1-202ENST00000546274 SLFN5Q08AF3 891 aa10.03□□□□□ -0.8
UBR1-202ENST00000546274 WDR43Q15061 677 aaKnown RBP eCLIP10.03□□□□□ -0.8
UBR1-202ENST00000546274 SPINK5Q9NQ38 1064 aaPredicted RBP10.03□□□□□ -0.8
UBR1-202ENST00000546274 GOLGA2Q08379 1002 aa10.03□□□□□ -0.8
UBR1-202ENST00000546274 MAPK8IP2Q13387 824 aaPredicted RBP10.02□□□□□ -0.8
UBR1-202ENST00000546274 CDCA8Q53HL2 280 aa10.02□□□□□ -0.8
UBR1-202ENST00000546274 EIF3AQ14152 1382 aaKnown RBP10.02□□□□□ -0.8
UBR1-202ENST00000546274 ANP32BQ92688 251 aaKnown RBP10.02□□□□□ -0.81
UBR1-202ENST00000546274 SMAP1Q8IYB5 467 aaPredicted RBP10.02□□□□□ -0.81
UBR1-202ENST00000546274 PPLO60437 1756 aa10.02□□□□□ -0.81
UBR1-202ENST00000546274 HECW2Q9P2P5 1572 aa10.01□□□□□ -0.81
UBR1-202ENST00000546274 NKTRP30414 1462 aaKnown RBP10.01□□□□□ -0.81
UBR1-202ENST00000546274 CENPQQ7L2Z9 268 aaPredicted RBP10.01□□□□□ -0.81
UBR1-202ENST00000546274 CCDC146Q8IYE0 955 aa10.01□□□□□ -0.81
UBR1-202ENST00000546274 CARD14Q9BXL6 1004 aa10.01□□□□□ -0.81
UBR1-202ENST00000546274 PPP6R1Q9UPN7 881 aa10.01□□□□□ -0.81
UBR1-202ENST00000546274 RIPK4P57078 832 aa10□□□□□ -0.81
UBR1-202ENST00000546274 ZNF830Q96NB3 372 aaPredicted RBP10□□□□□ -0.81
UBR1-202ENST00000546274 QRICH2Q9H0J4 1663 aa10□□□□□ -0.81
UBR1-202ENST00000546274 SETBP1Q9Y6X0 1596 aa10□□□□□ -0.81
UBR1-202ENST00000546274 ADGRF5Q8IZF2 1346 aa10□□□□□ -0.81
UBR1-202ENST00000546274 ADGRB3O60242 1522 aa10□□□□□ -0.81
UBR1-202ENST00000546274 C8orf34Q49A92 452 aa10□□□□□ -0.81
UBR1-202ENST00000546274 CFAP70Q5T0N1 1121 aa10□□□□□ -0.81
UBR1-202ENST00000546274 DMRT2Q9Y5R5 561 aa10□□□□□ -0.81
UBR1-202ENST00000546274 REREQ9P2R6 1566 aa10□□□□□ -0.81
UBR1-202ENST00000546274 NCLP19338 710 aaKnown RBP9.99□□□□□ -0.81
UBR1-202ENST00000546274 LMTK2Q8IWU2 1503 aa9.99□□□□□ -0.81
UBR1-202ENST00000546274 MLH3Q9UHC1 1453 aa9.99□□□□□ -0.81
UBR1-202ENST00000546274 PPP4R3BQ5MIZ7 849 aa9.99□□□□□ -0.81
UBR1-202ENST00000546274 KANK1Q14678 1352 aa9.98□□□□□ -0.81
UBR1-202ENST00000546274 APAF1O14727 1248 aa9.98□□□□□ -0.81
UBR1-202ENST00000546274 TNNT2P45379 298 aaPredicted RBP9.98□□□□□ -0.81
UBR1-202ENST00000546274 SPRYD3Q8NCJ5 442 aa9.98□□□□□ -0.81
UBR1-202ENST00000546274 USP32Q8NFA0 1604 aa9.98□□□□□ -0.81
UBR1-202ENST00000546274 DHX37Q8IY37 1157 aaKnown RBP9.98□□□□□ -0.81
UBR1-202ENST00000546274 R3HCC1Q9Y3T6 440 aaKnown RBP9.98□□□□□ -0.81
UBR1-202ENST00000546274 SBNO2Q9Y2G9 1366 aa9.98□□□□□ -0.81
UBR1-202ENST00000546274 FAM161AQ3B820 660 aa9.97□□□□□ -0.81
UBR1-202ENST00000546274 TMEM51Q9NW97 253 aa9.97□□□□□ -0.81
UBR1-202ENST00000546274 ADGRB1O14514 1584 aa9.97□□□□□ -0.81
UBR1-202ENST00000546274 FSD2A1L4K1 749 aa9.97□□□□□ -0.81
UBR1-202ENST00000546274 KIF3BO15066 747 aa9.97□□□□□ -0.81
UBR1-202ENST00000546274 BCAR3O75815 825 aa9.97□□□□□ -0.81
UBR1-202ENST00000546274 MRE11P49959 708 aa9.97□□□□□ -0.81
UBR1-202ENST00000546274 IQSEC2Q5JU85 1478 aa9.97□□□□□ -0.81
UBR1-202ENST00000546274 RAPGEF3O95398 923 aa9.97□□□□□ -0.81
UBR1-202ENST00000546274 MAP7D2Q96T17 732 aa9.97□□□□□ -0.81
UBR1-202ENST00000546274 CFAP65Q6ZU64 1925 aaKnown RBP9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms