RNA–Protein interactions for RNA: ENST00000545908.5

MTHFD1-202, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2 BASIC

Gene MTHFD1, Length 6,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-202ENST00000545908 CABP1Q9NZU7 370 aa11.2□□□□□ -0.62
MTHFD1-202ENST00000545908 TCERG1O14776 1098 aaKnown RBP11.2□□□□□ -0.62
MTHFD1-202ENST00000545908 LRRFIP1Q32MZ4 808 aaKnown RBP11.2□□□□□ -0.62
MTHFD1-202ENST00000545908 ANKRD45Q5TZF3 282 aa11.2□□□□□ -0.62
MTHFD1-202ENST00000545908 CABP4P57796 275 aa11.19□□□□□ -0.62
MTHFD1-202ENST00000545908 DDX54Q8TDD1 881 aaKnown RBP11.19□□□□□ -0.62
MTHFD1-202ENST00000545908 ANKRD30BQ9BXX2 1392 aa11.19□□□□□ -0.62
MTHFD1-202ENST00000545908 RAD21O60216 631 aa11.19□□□□□ -0.62
MTHFD1-202ENST00000545908 SPG7Q9UQ90 795 aa11.19□□□□□ -0.62
MTHFD1-202ENST00000545908 PPP1R1BQ9UD71 204 aaPredicted RBP11.19□□□□□ -0.62
MTHFD1-202ENST00000545908 HTATSF1O43719 755 aaKnown RBP11.19□□□□□ -0.62
MTHFD1-202ENST00000545908 NBPF1Q3BBV0 1214 aa11.18□□□□□ -0.62
MTHFD1-202ENST00000545908 CEBPAP49715 358 aaPredicted RBP11.18□□□□□ -0.62
MTHFD1-202ENST00000545908 WDR62O43379 1518 aa11.18□□□□□ -0.62
MTHFD1-202ENST00000545908 NOL8Q76FK4 1167 aaKnown RBP11.18□□□□□ -0.62
MTHFD1-202ENST00000545908 NOP58Q9Y2X3 529 aaKnown RBP11.18□□□□□ -0.62
MTHFD1-202ENST00000545908 DMRT2Q9Y5R5 561 aa11.18□□□□□ -0.62
MTHFD1-202ENST00000545908 DNTTIP2Q5QJE6 756 aaKnown RBP11.18□□□□□ -0.62
MTHFD1-202ENST00000545908 KIAA0556O60303 1618 aa11.18□□□□□ -0.62
MTHFD1-202ENST00000545908 IFIT2P09913 472 aaKnown RBP11.18□□□□□ -0.62
MTHFD1-202ENST00000545908 MTHFSP49914 203 aa11.18□□□□□ -0.62
MTHFD1-202ENST00000545908 WDR7Q9Y4E6 1490 aa11.17□□□□□ -0.62
MTHFD1-202ENST00000545908 API5Q9BZZ5 524 aaKnown RBP11.17□□□□□ -0.62
MTHFD1-202ENST00000545908 G3BP1Q13283 466 aaKnown RBP eCLIP11.17□□□□□ -0.629e-7■■■□□ 15.9
MTHFD1-202ENST00000545908 FAM177BA6PVY3 158 aa11.17□□□□□ -0.62
MTHFD1-202ENST00000545908 MARCH6O60337 910 aa11.17□□□□□ -0.62
MTHFD1-202ENST00000545908 CWC22Q9HCG8 908 aaKnown RBP11.16□□□□□ -0.62
MTHFD1-202ENST00000545908 ABCC5O15440 1437 aa11.16□□□□□ -0.62
MTHFD1-202ENST00000545908 ERICH6BQ5W0A0 696 aa11.16□□□□□ -0.62
MTHFD1-202ENST00000545908 PRDM11Q9NQV5 511 aa11.16□□□□□ -0.62
MTHFD1-202ENST00000545908 PLIN1O60240 522 aa11.16□□□□□ -0.62
MTHFD1-202ENST00000545908 RASSF8Q8NHQ8 419 aa11.16□□□□□ -0.62
MTHFD1-202ENST00000545908 DRC7Q8IY82 874 aa11.15□□□□□ -0.62
MTHFD1-202ENST00000545908 NRDCO43847 1150 aa11.15□□□□□ -0.62
MTHFD1-202ENST00000545908 PPP6R1Q9UPN7 881 aa11.15□□□□□ -0.62
MTHFD1-202ENST00000545908 FBXO31Q5XUX0 539 aaPredicted RBP11.15□□□□□ -0.62
MTHFD1-202ENST00000545908 ATAD2Q6PL18 1390 aa11.15□□□□□ -0.63
MTHFD1-202ENST00000545908 CCDC30Q5VVM6 783 aa11.15□□□□□ -0.63
MTHFD1-202ENST00000545908 KIF16BQ96L93 1317 aa11.14□□□□□ -0.63
MTHFD1-202ENST00000545908 APPP05067 770 aa11.14□□□□□ -0.63
MTHFD1-202ENST00000545908 NUDT16Q96DE0 195 aaKnown RBP11.14□□□□□ -0.63
MTHFD1-202ENST00000545908 DIAPH3Q9NSV4 1193 aa11.14□□□□□ -0.63
MTHFD1-202ENST00000545908 DDX19BQ9UMR2 479 aa11.14□□□□□ -0.63
MTHFD1-202ENST00000545908 CRBNQ96SW2 442 aa11.14□□□□□ -0.63
MTHFD1-202ENST00000545908 AKAP17AQ02040 695 aaKnown RBP11.14□□□□□ -0.63
MTHFD1-202ENST00000545908 SYNE3Q6ZMZ3 975 aa11.13□□□□□ -0.63
MTHFD1-202ENST00000545908 SLC12A5Q9H2X9 1139 aa11.13□□□□□ -0.63
MTHFD1-202ENST00000545908 PRKAR2BP31323 418 aa11.13□□□□□ -0.63
MTHFD1-202ENST00000545908 WAPLQ7Z5K2 1190 aa11.13□□□□□ -0.63
MTHFD1-202ENST00000545908 COG6Q9Y2V7 657 aa11.13□□□□□ -0.63
MTHFD1-202ENST00000545908 RRP1P56182 461 aaKnown RBP11.13□□□□□ -0.63
MTHFD1-202ENST00000545908 NAP1L5Q96NT1 182 aaPredicted RBP11.13□□□□□ -0.63
MTHFD1-202ENST00000545908 TNRQ92752 1358 aa11.13□□□□□ -0.63
MTHFD1-202ENST00000545908 DZIP1LQ8IYY4 767 aaKnown RBP11.12□□□□□ -0.63
MTHFD1-202ENST00000545908 LRPPRCP42704 1394 aaKnown RBP11.12□□□□□ -0.63
MTHFD1-202ENST00000545908 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.12□□□□□ -0.63
MTHFD1-202ENST00000545908 PTMSP20962 102 aa11.12□□□□□ -0.63
MTHFD1-202ENST00000545908 ZBED9Q6R2W3 1325 aa11.12□□□□□ -0.63
MTHFD1-202ENST00000545908 CCDC27Q2M243 656 aa11.12□□□□□ -0.63
MTHFD1-202ENST00000545908 TCEAL9Q9UHQ7 104 aa11.12□□□□□ -0.63
MTHFD1-202ENST00000545908 SYCP2Q9BX26 1530 aa11.12□□□□□ -0.63
MTHFD1-202ENST00000545908 PPP2R1AP30153 589 aa11.12□□□□□ -0.63
MTHFD1-202ENST00000545908 KDM5BQ9UGL1 1544 aa11.12□□□□□ -0.63
MTHFD1-202ENST00000545908 ZC3H6P61129 1189 aaKnown RBP11.12□□□□□ -0.63
MTHFD1-202ENST00000545908 RUFY2Q8WXA3 655 aa11.12□□□□□ -0.63
MTHFD1-202ENST00000545908 ADAMTS2O95450 1211 aa11.11□□□□□ -0.63
MTHFD1-202ENST00000545908 RRS1Q15050 365 aaKnown RBP11.11□□□□□ -0.63
MTHFD1-202ENST00000545908 SULT6B1Q6IMI4 303 aa11.11□□□□□ -0.63
MTHFD1-202ENST00000545908 GBP4Q96PP9 640 aa11.11□□□□□ -0.63
MTHFD1-202ENST00000545908 AMOTL2Q9Y2J4 779 aa11.11□□□□□ -0.63
MTHFD1-202ENST00000545908 MAP3K1Q13233 1512 aa11.11□□□□□ -0.63
MTHFD1-202ENST00000545908 DUOX2Q9NRD8 1548 aa11.11□□□□□ -0.63
MTHFD1-202ENST00000545908 FYB1O15117 783 aa11.11□□□□□ -0.63
MTHFD1-202ENST00000545908 ST18O60284 1047 aa11.11□□□□□ -0.63
MTHFD1-202ENST00000545908 ZNF530Q6P9A1 599 aaPredicted RBP11.11□□□□□ -0.63
MTHFD1-202ENST00000545908 KCNH5Q8NCM2 988 aa11.11□□□□□ -0.63
MTHFD1-202ENST00000545908 CSPP1Q1MSJ5 1256 aa11.11□□□□□ -0.63
MTHFD1-202ENST00000545908 CENPQQ7L2Z9 268 aaPredicted RBP11.11□□□□□ -0.63
MTHFD1-202ENST00000545908 NEUROD6Q96NK8 337 aa11.1□□□□□ -0.63
MTHFD1-202ENST00000545908 FOXD4L1Q9NU39 408 aa11.1□□□□□ -0.63
MTHFD1-202ENST00000545908 UBTFL1P0CB47 393 aaPredicted RBP11.1□□□□□ -0.63
MTHFD1-202ENST00000545908 KIAA2012Q0VF49 1180 aa11.1□□□□□ -0.63
MTHFD1-202ENST00000545908 ATP10BO94823 1461 aa11.1□□□□□ -0.63
MTHFD1-202ENST00000545908 ZNF518AQ6AHZ1 1483 aa11.1□□□□□ -0.63
MTHFD1-202ENST00000545908 BRD4O60885 1362 aaPredicted RBP11.1□□□□□ -0.63
MTHFD1-202ENST00000545908 H3BQV1 296 aa11.1□□□□□ -0.63
MTHFD1-202ENST00000545908 IFFO2Q5TF58 517 aa11.1□□□□□ -0.63
MTHFD1-202ENST00000545908 CCDC34Q96HJ3 373 aa11.1□□□□□ -0.63
MTHFD1-202ENST00000545908 KIF3AQ9Y496 699 aa11.1□□□□□ -0.63
MTHFD1-202ENST00000545908 TPM4P67936 248 aa11.09□□□□□ -0.63
MTHFD1-202ENST00000545908 HSP90AB4PQ58FF6 505 aa11.09□□□□□ -0.63
MTHFD1-202ENST00000545908 PNISRQ8TF01 805 aaKnown RBP11.09□□□□□ -0.63
MTHFD1-202ENST00000545908 PLCH2O75038 1416 aa11.09□□□□□ -0.63
MTHFD1-202ENST00000545908 UGGT2Q9NYU1 1516 aa11.09□□□□□ -0.63
MTHFD1-202ENST00000545908 ANO2Q9NQ90 1003 aa11.09□□□□□ -0.63
MTHFD1-202ENST00000545908 NSD3Q9BZ95 1437 aa11.09□□□□□ -0.63
MTHFD1-202ENST00000545908 FAM184AQ8NB25 1140 aa11.09□□□□□ -0.63
MTHFD1-202ENST00000545908 NAIPQ13075 1403 aa11.09□□□□□ -0.63
MTHFD1-202ENST00000545908 DHX16O60231 1041 aaKnown RBP11.08□□□□□ -0.64
MTHFD1-202ENST00000545908 DHX29Q7Z478 1369 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms